Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 427 results

7KXS
DownloadVisualize
BU of 7kxs by Molmil
Computational design of constitutively active cGAS
Descriptor: Cyclic GMP-AMP synthase, ZINC ION
Authors:Dowling, Q, Volkman, H.E, Gray, E.E, Ovchinnikov, S, Cambier, S, Bera, A.K, Bick, M, Kang, A, Stetson, D.B, King, N.P.
Deposit date:2020-12-04
Release date:2021-12-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Computational design of constitutively active cGAS.
Nat.Struct.Mol.Biol., 30, 2023
5AGS
DownloadVisualize
BU of 5ags by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 3-(AMINOMETHYL)-4-BROMO-7-ETHOXYBENZO[C][1,2]OXABOROL-1(3H)-OL-MODIFIED ADENOSINE, LEUCYL-TRNA SYNTHETASE, METHIONINE
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
7L5C
DownloadVisualize
BU of 7l5c by Molmil
Structure of copper bound MEMO1
Descriptor: 1,2-ETHANEDIOL, COPPER (I) ION, GLYCEROL, ...
Authors:Boniecki, M.T, Uhlemann, E.E, Dmitriev, O.Y.
Deposit date:2020-12-21
Release date:2022-01-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:MEMO1 binds iron and modulates iron homeostasis in cancer cells.
Elife, 13, 2024
5AGT
DownloadVisualize
BU of 5agt by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct (S)-3-(Aminomethyl)-4-chloro-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosine, GLYCEROL, LEUCINE--TRNA LIGASE, ...
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5AC9
DownloadVisualize
BU of 5ac9 by Molmil
Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design
Descriptor: VP1, VP2, VP3, ...
Authors:Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, PerezMartin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
Deposit date:2015-08-14
Release date:2015-09-23
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure-Based Energetics of Protein Interfaces Guide Foot-and-Mouth Disease Vaccine Design
Nat.Struct.Mol.Biol., 22, 2015
5ABJ
DownloadVisualize
BU of 5abj by Molmil
Structure of Coxsackievirus A16 in complex with GPP3
Descriptor: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, CHLORIDE ION, SODIUM ION, ...
Authors:De Colibus, L, Wang, X, Tijsma, A, Neyts, J, Spyrou, J.A.B, Ren, J, Grimes, J.M, Puerstinger, G, Leyssen, P, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2015-08-06
Release date:2015-09-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure Elucidation of Coxsackievirus A16 in Complex with Gpp3 Informs a Systematic Review of Highly Potent Capsid Binders to Enteroviruses.
Plos Pathog., 11, 2015
7LKQ
DownloadVisualize
BU of 7lkq by Molmil
The PilZ(delta107-117)-FimX(GGDEF-EAL) complex from Xanthomonas citri
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX(GGDEF-EAL), MAGNESIUM ION, ...
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKO
DownloadVisualize
BU of 7lko by Molmil
The PilB(N-terminal)-PilZ complex of the Type IV pilus from Xanthomonas citri (2.9 A)
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKN
DownloadVisualize
BU of 7lkn by Molmil
The PilB(N-terminal_P70S mutant)-PilZ complex (SeMet)
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2021-09-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKM
DownloadVisualize
BU of 7lkm by Molmil
The PilB(N-terminal_P70S mutant)-PilZ complex of the Type IV pilus from Xanthomonas citri
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
1QA6
DownloadVisualize
BU of 1qa6 by Molmil
CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
Descriptor: 58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN, MAGNESIUM ION, OSMIUM ION, ...
Authors:Conn, G.L, Draper, D.E, Lattman, E.E, Gittis, A.G.
Deposit date:1999-04-15
Release date:1999-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a conserved ribosomal protein-RNA complex.
Science, 284, 1999
1QQP
DownloadVisualize
BU of 1qqp by Molmil
FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.
Descriptor: 2-O-sulfo-alpha-L-gulopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-gulopyranuronic acid, PROTEIN (GENOME POLYPROTEIN)
Authors:Fry, E.E, Lea, S.M, Jackson, T, Newman, J.W.I, Ellard, F.M, Blakemore, W.E, Abu-Ghazaleh, R, Samuel, A, King, A.M.Q, Stuart, D.I.
Deposit date:1999-05-20
Release date:1999-06-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure and function of a foot-and-mouth disease virus-oligosaccharide receptor complex.
EMBO J., 18, 1999
1MWD
DownloadVisualize
BU of 1mwd by Molmil
WILD TYPE DEOXY MYOGLOBIN
Descriptor: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, A.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-11
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
7QI2
DownloadVisualize
BU of 7qi2 by Molmil
Magic-angle spinning NMR structure of the human voltage-dependent anion channel 1 (E73V/C127A/C232S) in DMPC lipid bilayers
Descriptor: Voltage-dependent anion-selective channel protein 1
Authors:Najbauer, E.E, Andreas, L.B.
Deposit date:2021-12-14
Release date:2022-03-16
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Structure and Gating Behavior of the Human Integral Membrane Protein VDAC1 in a Lipid Bilayer.
J.Am.Chem.Soc., 144, 2022
5J4O
DownloadVisualize
BU of 5j4o by Molmil
Structure of human erythrocytic Spectrin alpha chain repeats 16-17
Descriptor: 1,2-ETHANEDIOL, Spectrin alpha chain, erythrocytic 1, ...
Authors:Cutts, E.E, Vakonakis, I.
Deposit date:2016-04-01
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Interactions of Plasmodium falciparum KAHRP and PfEMP1 with the host cytoskeleton suggest a model for cytoadherent protrusions on the infected erythrocyte surface
To Be Published
7SQY
DownloadVisualize
BU of 7sqy by Molmil
CSDaV GFP mutant
Descriptor: Citrus Sudden Death-associated Virus Capsid Protein,Green fluorescent protein,Citrus Sudden Death-associated Virus Capsid Protein
Authors:Guo, F, Matsumura, E.E, Falk, B.W.
Deposit date:2021-11-07
Release date:2022-05-25
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Citrus sudden death-associated virus as a new expression vector for rapid in planta production of heterologous proteins, chimeric virions, and virus-like particles.
Biotechnol Rep., 35, 2022
5JI7
DownloadVisualize
BU of 5ji7 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5JI9
DownloadVisualize
BU of 5ji9 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5JIU
DownloadVisualize
BU of 5jiu by Molmil
The crystal structure of RanBPM/9 IUS-SPRY domain in complex with DDX-4 peptide
Descriptor: CHLORIDE ION, Probable ATP-dependent RNA helicase DDX4, Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
7QBY
DownloadVisualize
BU of 7qby by Molmil
Refined structure of the T193A mutant in the C-terminal domain of DNAJB6b
Descriptor: Isoform B of DnaJ homolog subfamily B member 6
Authors:Karamanos, T.K, Cawood, E.E.
Deposit date:2021-11-21
Release date:2022-03-30
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Microsecond Backbone Motions Modulate the Oligomerization of the DNAJB6 Chaperone.
Angew.Chem.Int.Ed.Engl., 61, 2022
5IRV
DownloadVisualize
BU of 5irv by Molmil
Human cytochrome P450 17A1 bound to inhibitor VT-464
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase, VT-464
Authors:Scott, E.E, Petrunak, E.M.
Deposit date:2016-03-14
Release date:2017-03-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.098 Å)
Cite:Structural and Functional Evaluation of Clinically Relevant Inhibitors of Steroidogenic Cytochrome P450 17A1.
Drug Metab. Dispos., 45, 2017
7T7I
DownloadVisualize
BU of 7t7i by Molmil
EBV nuclear egress complex
Descriptor: Nuclear egress protein 1, Nuclear egress protein 2, ZINC ION
Authors:Thorsen, M.K, Heldwein, E.E.
Deposit date:2021-12-15
Release date:2022-07-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.97 Å)
Cite:The nuclear egress complex of Epstein-Barr virus buds membranes through an oligomerization-driven mechanism.
Plos Pathog., 18, 2022
5IRQ
DownloadVisualize
BU of 5irq by Molmil
Human cytochrome P450 17A1 bound to inhibitors (R)- and (S)- orteronel
Descriptor: (R)-orteronel, (S)-orteronel, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Scott, E.E, Petrunak, E.M.
Deposit date:2016-03-14
Release date:2017-03-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Structural and Functional Evaluation of Clinically Relevant Inhibitors of Steroidogenic Cytochrome P450 17A1.
Drug Metab. Dispos., 45, 2017
5J2Z
DownloadVisualize
BU of 5j2z by Molmil
PRV UL37 N-terminal half (R2 mutant)
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, ACETATE ION, CALCIUM ION, ...
Authors:Heldwein, E.E, Pitts, J.D.
Deposit date:2016-03-30
Release date:2017-10-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The pUL37 tegument protein guides alpha-herpesvirus retrograde axonal transport to promote neuroinvasion.
PLoS Pathog., 13, 2017
5JIA
DownloadVisualize
BU of 5jia by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBP10
Descriptor: IMIDAZOLE, Ran-binding protein 10
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon