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PDB: 40926 results

3TRY
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Crystal structure of racemic villin headpiece subdomain in space group I-4c2
Descriptor: D-Villin-1, SULFATE ION
Authors:Mortenson, D.E, Satyshur, K.A, Gellman, S.H, Forest, K.T.
Deposit date:2011-09-11
Release date:2012-01-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Quasiracemic crystallization as a tool to assess the accommodation of noncanonical residues in nativelike protein conformations.
J.Am.Chem.Soc., 134, 2012
3TYS
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BU of 3tys by Molmil
Crystal structure of transcriptional regulator VanUg, Form II
Descriptor: Predicted transcriptional regulator
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Depardieu, F, Courvalin, P, Shabalin, I, Chruszcz, M, Minor, W, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-09-26
Release date:2011-10-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.121 Å)
Cite:Crystal structure of transcriptional regulator VanUg, Form II
TO BE PUBLISHED
6DRV
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BU of 6drv by Molmil
Beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Cianfrocco, M.A, Lahiri, I, DiMaio, F, Leschziner, A.E.
Deposit date:2018-06-13
Release date:2018-07-11
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:cryoem-cloud-tools: A software platform to deploy and manage cryo-EM jobs in the cloud.
J. Struct. Biol., 203, 2018
3UAR
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BU of 3uar by Molmil
Crystal structure of glutathione transferase (TARGET EFI-501774) from methylococcus capsulatus str. bath with gsh bound
Descriptor: GLUTATHIONE, GLYCEROL, Glutathione S-transferase
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Zencheck, W.D, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Imker, H.J, Armstrong, R.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-10-21
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Glutathione S-Transferase from Methylococcus Capsulatus
To be Published
1I4V
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BU of 1i4v by Molmil
SOLUTION STRUCTURE OF THE UMUD' HOMODIMER
Descriptor: UMUD' PROTEIN
Authors:Ferentz, A.E, Walker, G.C, Wagner, G.
Deposit date:2001-02-23
Release date:2001-08-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).
EMBO J., 20, 2001
4U8U
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BU of 4u8u by Molmil
The Crystallographic structure of the giant hemoglobin from Glossoscolex paulistus at 3.2 A resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CYANIDE ION, ...
Authors:Bachega, J.F.R, Maluf, F.V, Andi, B, D'Muniz Pereira, H, Carazzollea, M.F, Orville, A, Tabak, M, Garratt, R.C, Horjales, E.
Deposit date:2014-08-04
Release date:2015-06-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structure of the giant haemoglobin from Glossoscolex paulistus.
Acta Crystallogr.,Sect.D, 71, 2015
1I9F
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BU of 1i9f by Molmil
STRUCTURAL CHARACTERIZATION OF THE COMPLEX OF THE REV RESPONSE ELEMENT RNA WITH A SELECTED PEPTIDE
Descriptor: REV RESPONSE ELEMENT RNA, RSG-1.2 PEPTIDE
Authors:Zhang, Q, Harada, K, Cho, H.S, Frankel, A, Wemmer, D.E.
Deposit date:2001-03-19
Release date:2001-05-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural characterization of the complex of the Rev response element RNA with a selected peptide.
Chem.Biol., 8, 2001
1I98
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BU of 1i98 by Molmil
NMR ENSEMBLE OF ION-SELECTIVE LIGAND D18 FOR PLATELET INTEGRIN ALPHAIIB-BETA3
Descriptor: ION-SELECTIVE LIGAND D18
Authors:Smith, J.W, Le Calvez, H, Parra-Gessert, L, Preece, N.E, Jia, X, Assa-Munt, N.
Deposit date:2001-03-18
Release date:2002-07-10
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Selection and structure of ion-selective ligands for platelet integrin alpha IIb(beta) 3.
J.Biol.Chem., 277, 2002
1I5S
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BU of 1i5s by Molmil
CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION
Authors:Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
Deposit date:2001-02-28
Release date:2001-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Switch-based mechanism of kinesin motors
Nature, 411, 2001
4U74
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Crystal structure of 4-phenylimidazole bound form of human indoleamine 2,3-dioxygenase (G262A mutant)
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-PHENYL-1H-IMIDAZOLE, Indoleamine 2,3-dioxygenase 1, ...
Authors:Sugimoto, H, Horitani, M, Kometani, E, Shiro, Y.
Deposit date:2014-07-30
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Conformation and Mobility of Active Site Loop is Critical for Substrate Binding and Inhibition in Human Indoleamine 2,3-Dioxygenase
to be published
1I86
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BU of 1i86 by Molmil
CHALCONE SYNTHASE, G256A MUTANT
Descriptor: CHALCONE SYNTHASE 2, SULFATE ION
Authors:Jez, J.M, Bowman, M.E, Noel, J.P.
Deposit date:2001-03-12
Release date:2001-12-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-guided programming of polyketide chain-length determination in chalcone synthase.
Biochemistry, 40, 2001
1I89
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BU of 1i89 by Molmil
Chalcone synthase (G256L)
Descriptor: CHALCONE SYNTHASE 2
Authors:Jez, J.M, Bowman, M.E, Noel, J.P.
Deposit date:2001-03-12
Release date:2001-12-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure-guided programming of polyketide chain-length determination in chalcone synthase.
Biochemistry, 40, 2001
1IBD
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BU of 1ibd by Molmil
X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT V29A
Descriptor: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION
Authors:Stroppolo, M.E, Pesce, A, D'Orazio, M, O'Neill, P, Bordo, D, Rosano, C, Milani, M, Battistoni, A, Bolognesi, M, Desideri, A.
Deposit date:2001-03-28
Release date:2001-05-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase.
J.Mol.Biol., 308, 2001
1I8B
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BU of 1i8b by Molmil
Chalcone synthase (G256F)
Descriptor: CHALCONE SYNTHASE 2
Authors:Jez, J.M, Bowman, M.E, Noel, J.P.
Deposit date:2001-03-12
Release date:2001-12-12
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-guided programming of polyketide chain-length determination in chalcone synthase.
Biochemistry, 40, 2001
3UNJ
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BU of 3unj by Molmil
CDK2 in complex with inhibitor YL1-038-31
Descriptor: 4-{[4-(phenylamino)pyrimidin-2-yl]amino}benzoic acid, Cyclin-dependent kinase 2, PHOSPHATE ION
Authors:Zhu, J.-Y, Martin, M.P, Alam, R, Schonbrunn, E.
Deposit date:2011-11-15
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9001 Å)
Cite:A Novel Mechanism by Which Small Molecule Inhibitors Induce the DFG Flip in Aurora A.
Acs Chem.Biol., 7, 2012
6DLD
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BU of 6dld by Molmil
Crystal structure of IgLON5/NEGR1 heterodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IgLON family member 5, Neuronal growth regulator 1, ...
Authors:Ranaivoson, F.M, Turk, L.S, Ozkan, E, Montelione, G.T, Comoletti, D.
Deposit date:2018-06-01
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of a heterodimer of neuronal cell surface proteins
Structure, 2019
1I34
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BU of 1i34 by Molmil
SOLUTION DNA QUADRUPLEX WITH DOUBLE CHAIN REVERSAL LOOP AND TWO DIAGONAL LOOPS CONNECTING GGGG TETRADS FLANKED BY G-(T-T) TRIAD AND T-T-T TRIPLE
Descriptor: 5'-D(*GP*GP*TP*TP*TP*TP*GP*GP*CP*AP*GP*GP*GP*TP*TP*TP*TP*GP*GP*T)-3'
Authors:Kuryavyi, V, Majumdar, A, Shallop, A, Chernichenko, N, Skripkin, E, Jones, R, Patel, D.J.
Deposit date:2001-02-12
Release date:2001-06-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A double chain reversal loop and two diagonal loops define the architecture of a unimolecular DNA quadruplex containing a pair of stacked G(syn)-G(syn)-G(anti)-G(anti) tetrads flanked by a G-(T-T) Triad and a T-T-T triple.
J.Mol.Biol., 310, 2001
1I6Y
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BU of 1i6y by Molmil
NMR ENSEMBLE OF ION-SELECTIVE LIGAND A1 FOR PLATELET INTEGRIN ALPHAIIB-BETA3
Descriptor: ION-SELECTIVE LIGAND A1
Authors:Smith, J.W, Le Calvez, H, Parra-Gessert, L, Preece, N.E, Jia, X, Assa-Munt, N.
Deposit date:2001-03-06
Release date:2002-07-10
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Selection and structure of ion-selective ligands for platelet integrin alpha IIb(beta) 3.
J.Biol.Chem., 277, 2002
1IB5
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BU of 1ib5 by Molmil
X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT W83Y
Descriptor: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION
Authors:Stroppolo, M.E, Pesce, A, D'Orazio, M, O'Neill, P, Bordo, D, Rosano, C, Milani, M, Battistoni, A, Bolognesi, M, Desideri, A.
Deposit date:2001-03-27
Release date:2001-05-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase.
J.Mol.Biol., 308, 2001
4TWT
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BU of 4twt by Molmil
Human TNFa dimer in complex with the semi-synthetic bicyclic peptide M21
Descriptor: (2,4,6-trimethylbenzene-1,3,5-triyl)trimethanol, ALA-CYS-PRO-PRO-CYS-LEU-TRP-GLN-VAL-LEU-CYS-GLY, GLYCEROL, ...
Authors:Luzi, S, Kondo, Y, Bernard, E, Stadler, L, Winter, G, Holliger, P.
Deposit date:2014-07-01
Release date:2015-02-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Subunit disassembly and inhibition of TNF alpha by a semi-synthetic bicyclic peptide.
Protein Eng.Des.Sel., 28, 2015
1I5G
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BU of 1i5g by Molmil
TRYPAREDOXIN II COMPLEXED WITH GLUTATHIONYLSPERMIDINE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLUTATHIONYLSPERMIDINE, TRYPAREDOXIN II
Authors:Hofmann, B, Budde, H, Bruns, K, Guerrero, S.A, Kalisz, H.M, Menge, U, Montemartini, M, Nogoceke, E, Steinert, P, Wissing, J.B, Flohe, L, Hecht, H.-J.
Deposit date:2001-02-27
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structures of tryparedoxins revealing interaction with trypanothione.
Biol.Chem., 382, 2001
4U3F
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BU of 4u3f by Molmil
Cytochrome bc1 complex from chicken with designed inhibitor bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CARDIOLIPIN, ...
Authors:Huang, L.-S, Zhu, X.-L, Yang, G.F, Berry, E.A.
Deposit date:2014-07-21
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2312 Å)
Cite:Rational Design of Highly Potent and Slow-Binding Cytochrome bc1 Inhibitor as Fungicide by Computational Substitution Optimization
Sci Rep, 5, 2015
1I7Y
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BU of 1i7y by Molmil
CRYSTAL STRUCTURE OF C-PHYCOCYANIN OF SYNECHOCOCCUS VULCANUS AT 2.5 ANGSTROMS.
Descriptor: C-phycocyanin alpha subunit (Fragment), C-phycocyanin beta subunit (Fragment), PHYCOCYANOBILIN
Authors:Adir, N, Dobrovetsky, E, Lerner, N.
Deposit date:2001-03-11
Release date:2001-03-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of c-phycocyanin from the thermophilic cyanobacterium Synechococcus vulcanus at 2.5 A: structural implications for thermal stability in phycobilisome assembly.
J.Mol.Biol., 313, 2001
1I60
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BU of 1i60 by Molmil
Structural genomics, IOLI protein
Descriptor: IOLI PROTEIN
Authors:Zhang, R, Dementieva, I, Collart, F, Quaite-Randall, E, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-03-01
Release date:2002-03-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Bacillus subtilis ioli shows endonuclase IV fold with altered Zn binding.
Proteins, 48, 2002
1I6N
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1.8 A Crystal structure of IOLI protein with a binding zinc atom
Descriptor: IOLI PROTEIN, ZINC ION
Authors:Zhang, R.G, Dementiva, I, Collart, F, Quaite-Randall, E, Joachimiak, A, Alkire, R, Maltsev, N, Korolev, O, Dieckman, L, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-03-02
Release date:2002-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Bacillus subtilis ioli shows endonuclase IV fold with altered Zn binding.
Proteins, 48, 2002

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