Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 40926 results

4UZ3
DownloadVisualize
BU of 4uz3 by Molmil
Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
Authors:Wong, J.E.M.M, Blaise, M.
Deposit date:2014-09-04
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:An Intermolecular Binding Mechanism Involving Multiple Lysm Domains Mediates Carbohydrate Recognition by an Endopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
6WXI
DownloadVisualize
BU of 6wxi by Molmil
Colicin E1 fragment in nanodisc-embedded TolC
Descriptor: Outer membrane protein TolC
Authors:Kaelber, J.T, Budiardjo, S.J, Firlar, E, Ikujuni, A.P, Slusky, J.S.G.
Deposit date:2020-05-10
Release date:2021-05-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Colicin E1 opens its hinge to plug TolC.
Elife, 11, 2022
6WXH
DownloadVisualize
BU of 6wxh by Molmil
Colicin E1 fragment in nanodisc-embedded TolC
Descriptor: Colicin-E1, Outer membrane protein TolC
Authors:Kaelber, J.T, Budiardjo, S.J, Firlar, E, Case, D.A, Ikujuni, A.P, Slusky, J.S.G.
Deposit date:2020-05-10
Release date:2021-05-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Colicin E1 opens its hinge to plug TolC.
Elife, 11, 2022
6WKO
DownloadVisualize
BU of 6wko by Molmil
Structure of an influenza C virus hemagglutinin-esterase-fusion (HEF2) intermediate
Descriptor: CHLORIDE ION, Hemagglutinin-esterase-fusion glycoprotein
Authors:Serrao, V.H.B, Lee, J.E.
Deposit date:2020-04-16
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Snapshot of an influenza virus glycoprotein fusion intermediate.
Cell Rep, 35, 2021
4UZ5
DownloadVisualize
BU of 4uz5 by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM IV - 2.1A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, NOTUM
Authors:Zebisch, M, Jones, E.Y.
Deposit date:2014-09-04
Release date:2015-02-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Notum Deacylates Wnt Proteins to Suppress Signalling Activity.
Nature, 519, 2015
5E4P
DownloadVisualize
BU of 5e4p by Molmil
X-ray Crystal Structure Analysis of Magnetically Oriented Microcrystals of Lysozyme at 1.8 angstrom Resolution
Descriptor: Lysozyme C
Authors:Tsukui, S, Kimura, F, Garman, E.F, Baba, S, Mizuno, N, Mikami, B, Kimura, T.
Deposit date:2015-10-06
Release date:2016-08-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:X-ray crystal structure analysis of magnetically oriented microcrystals of lysozyme at 1.8 A resolution
J.Appl.Crystallogr., 49, 2016
4WCH
DownloadVisualize
BU of 4wch by Molmil
Structure of Isolated D Chain of Gigant Hemoglobin from Glossoscolex paulistus
Descriptor: Isolated Chain D of Gigant Hemoglobin from Glossoscolex Paulistus, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bachega, J.F.R, Maluf, F.V, Pereira, H.M, Brandao-Neto, J, Tabak, M, Garratt, R.C, Horjales, E.
Deposit date:2014-09-04
Release date:2015-06-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of the giant haemoglobin from Glossoscolex paulistus.
Acta Crystallogr.,Sect.D, 71, 2015
4U2R
DownloadVisualize
BU of 4u2r by Molmil
Crystal structure of the GLUR2 ligand binding core (S1S2J, flip variant) in the apo state
Descriptor: Glutamate receptor 2, SULFATE ION
Authors:Duerr, K.L, Chen, L, Gouaux, E.
Deposit date:2014-07-17
Release date:2014-08-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4114 Å)
Cite:Structure and Dynamics of AMPA Receptor GluA2 in Resting, Pre-Open, and Desensitized States.
Cell, 158, 2014
6XH1
DownloadVisualize
BU of 6xh1 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.7 mutant
Descriptor: TAR binding protein mutant 6.7 Q48R/T50R, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
6XSB
DownloadVisualize
BU of 6xsb by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS A132S at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2020-07-15
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS A132S at cryogenic temperature
To be Published
6XSF
DownloadVisualize
BU of 6xsf by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS T41V at cryogenic temperature
Descriptor: THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B, Poblete, M.K.
Deposit date:2020-07-15
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS T41V at cryogenic temperature
To be Published
5DSZ
DownloadVisualize
BU of 5dsz by Molmil
Gamma-subunit of the translation initiation factor 2 from S. solfataricus
Descriptor: Translation initiation factor 2 subunit gamma
Authors:Kravchenko, O.V, Nikonov, O.S, Stolboushkina, E.A, Nevskaya, N.A, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
Deposit date:2015-09-17
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Gamma-subunit of the translation initiation factor 2 from S. solfataricus
To Be Published
6XVK
DownloadVisualize
BU of 6xvk by Molmil
Crystal structure of the KDR (VEGFR2) kinase domain in complex with a type-II inhibitor bearing an acrylamide
Descriptor: Vascular endothelial growth factor receptor 2, ~{N}-(4,4-dimethyl-2-prop-1-ynyl-3,1-benzoxazin-6-yl)-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide
Authors:Schimpl, M, McAuley, K, Hoyt, E.A, Thomas, M, Bodnarchuk, M.S, Lewis, H.J, Barratt, D, Deery, M.J, Ogg, D.J, Bernardes, G.J.L, Ward, R.A, Kettle, J.G, Waring, M.J.
Deposit date:2020-01-22
Release date:2020-05-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Alkynyl Benzoxazines and Dihydroquinazolines as Cysteine Targeting Covalent Warheads and Their Application in Identification of Selective Irreversible Kinase Inhibitors.
J.Am.Chem.Soc., 142, 2020
4U01
DownloadVisualize
BU of 4u01 by Molmil
HCV NS3/4A serine protease in complex with 6570
Descriptor: (2S,3aS,10Z,11aS,12aR)-2-({8-fluoro-7-methoxy-2-[4-(propan-2-yl)-1,3-thiazol-2-yl]quinolin-4-yl}oxy)-5-methyl-N-[(1-methylcyclopropyl)sulfonyl]-4,14-dioxo-1,2,3,3a,4,5,6,7,8,9,11a,12,13,14-tetradecahydro-12aH-cyclopropa[m]pyrrolo[1,2-c][1,3,6]triazacyclotetradecine-12a-carboxamide, CHLORIDE ION, NS4A protein, ...
Authors:Parsy, C.C, Alexandre, F.-R, Brandt, G, Caillet, C, Chaves, D, Derock, M, Gloux, D, Griffon, Y, Lallos, L.B, Leroy, F, Liuzzi, M, Loi, A.-G, Mayes, B, Moulat, L, Moussa, A, Chiara, M, Roques, V, Rosinovsky, E, Seifer, M, Stewart, A, Wang, J, Standring, D, Surleraux, D.
Deposit date:2014-07-11
Release date:2015-07-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery and structural diversity of the hepatitis C virus NS3/4A serine protease inhibitor series leading to clinical candidate IDX320.
Bioorg.Med.Chem.Lett., 25, 2015
4U0O
DownloadVisualize
BU of 4u0o by Molmil
Crystal structure of Thermosynechococcus elongatus Lipoyl Synthase 2 complexed with MTA and DTT
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 5'-DEOXY-5'-METHYLTHIOADENOSINE, IRON/SULFUR CLUSTER, ...
Authors:Harmer, J.E, Hiscox, M.J, Dinis, P.C, Sandy, J, Roach, P.L.
Deposit date:2014-07-13
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of lipoyl synthase reveal a compact active site for controlling sequential sulfur insertion reactions.
Biochem.J., 464, 2014
6XV9
DownloadVisualize
BU of 6xv9 by Molmil
Crystal structure of the kinase domain of human c-KIT in complex with a type-II inhibitor
Descriptor: Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit, ~{N}-[3-[(dimethylamino)methyl]-5-methyl-phenyl]-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide
Authors:Ogg, D.J, Howard, T, McAuley, K, Hoyt, E.A, Thomas, M, Bodnarchuk, M.S, Lewis, H.J, Barratt, D, Deery, M.J, Bernardes, G.J.L, Ward, R.A, Kettle, J.G, Waring, M.J.
Deposit date:2020-01-21
Release date:2020-05-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Alkynyl Benzoxazines and Dihydroquinazolines as Cysteine Targeting Covalent Warheads and Their Application in Identification of Selective Irreversible Kinase Inhibitors.
J.Am.Chem.Soc., 142, 2020
5E3F
DownloadVisualize
BU of 5e3f by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92K at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Skerritt, L.A, Caro, J.A, Heroux, A, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2015-10-02
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS I92K at cryogenic temperature
To be Published
5E56
DownloadVisualize
BU of 5e56 by Molmil
Crystal structure of mouse CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, SODIUM ION
Authors:Fedorov, A.A, Fedorov, E.V, SAMANTA, D, Bonanno, J.B, Almo, S.C.
Deposit date:2015-10-07
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Crystal structure of mouse CTLA-4
To Be Published
4U5C
DownloadVisualize
BU of 4u5c by Molmil
Crystal structure of GluA2, con-ikot-ikot snail toxin, partial agonist FW and postitive modulator (R,R)-2b complex
Descriptor: 2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-PROPIONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Con-ikot-ikot, ...
Authors:Chen, L, Gouaux, E.
Deposit date:2014-07-25
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.6883 Å)
Cite:X-ray structures of AMPA receptor-cone snail toxin complexes illuminate activation mechanism.
Science, 345, 2014
4U6D
DownloadVisualize
BU of 4u6d by Molmil
Zg3615, a family 117 glycoside hydrolase in complex with beta-3,6-anhydro-L-galactose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-beta-L-galactopyranose, CALCIUM ION, ...
Authors:Ficko-Blean, E.
Deposit date:2014-07-28
Release date:2015-02-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical and structural investigation of two paralogous glycoside hydrolases from Zobellia galactanivorans: novel insights into the evolution, dimerization plasticity and catalytic mechanism of the GH117 family.
Acta Crystallogr.,Sect.D, 71, 2015
4UAI
DownloadVisualize
BU of 4uai by Molmil
Crystal structure of CXCL12 in complex with inhibitor
Descriptor: 1-phenyl-3-[4-(1H-tetrazol-5-yl)phenyl]urea, SULFATE ION, Stromal cell-derived factor 1
Authors:Smith, E.W, Chen, Y.
Deposit date:2014-08-09
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of a Novel Small Molecule Ligand Bound to the CXCL12 Chemokine.
J.Med.Chem., 57, 2014
6XH3
DownloadVisualize
BU of 6xh3 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.3
Descriptor: TAR BINDING PROTEIN TBP 6.3, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.353 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
5DPO
DownloadVisualize
BU of 5dpo by Molmil
The crystal structure of uncharacterized protein (LPG2149) from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Nocek, B, Cuff, M, Evdokimova, E, Joachimiak, A, Savchenko, A.
Deposit date:2015-09-13
Release date:2015-11-25
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:The crystal structure of uncharacterized protein (LPG2149) from Legionella pneumophila
To Be Published
4U6B
DownloadVisualize
BU of 4u6b by Molmil
Zg3597, a family 117 glycoside hydrolase, produced by the marine bacterium Zobellia galactanivorans
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ...
Authors:Ficko-Blean, E.
Deposit date:2014-07-28
Release date:2015-02-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Biochemical and structural investigation of two paralogous glycoside hydrolases from Zobellia galactanivorans: novel insights into the evolution, dimerization plasticity and catalytic mechanism of the GH117 family.
Acta Crystallogr.,Sect.D, 71, 2015
4U7K
DownloadVisualize
BU of 4u7k by Molmil
Crystal structure of the Clostridium histolyticum colH collagenase polycystic kidney disease-like domain 2a in the presence of calcium at 1.9 Angstrom resolution
Descriptor: CALCIUM ION, ColH protein
Authors:Bauer, R, Janowska, K, Sakon, J, Matsushita, O, Latimer, E.
Deposit date:2014-07-31
Release date:2015-03-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structures of three polycystic kidney disease-like domains from Clostridium histolyticum collagenases ColG and ColH.
Acta Crystallogr.,Sect.D, 71, 2015

224572

건을2024-09-04부터공개중

PDB statisticsPDBj update infoContact PDBjnumon