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PDB: 41042 results

1U1F
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Structure of e. coli uridine phosphorylase complexed to 5-(m-(benzyloxy)benzyl)acyclouridine (BBAU)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-(3-(BENZYLOXY)BENZYL)PYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
2PIT
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Androgen receptor LBD with small molecule
Descriptor: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, SULFATE ION, ...
Authors:Estebanez-Perpina, E, Arnold, A.A, Baxter, J.D, Webb, P, Guy, R.K, Fletterick, K.R.
Deposit date:2007-04-13
Release date:2007-09-25
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:A surface on the androgen receptor that allosterically regulates coactivator binding.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2Q4W
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BU of 2q4w by Molmil
Ensemble refinement of the protein crystal structure of cytokinin oxidase/dehydrogenase (CKX) from Arabidopsis thaliana At5g21482
Descriptor: Cytokinin dehydrogenase 7, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Arabidopsis thaliana cytokinin dehydrogenase.
Proteins, 70, 2008
2A0F
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BU of 2a0f by Molmil
Structure of D236A mutant E. coli Aspartate Transcarbamoylase in presence of Phosphonoacetamide at 2.90 A resolution
Descriptor: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, PHOSPHONOACETAMIDE, ...
Authors:Stieglitz, K.A, Dusinberre, K.J, Cardia, J.P, Tsuruta, H, Kantrowitz, E.R.
Deposit date:2005-06-16
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the E.coli Aspartate Transcarbamoylase Trapped in the Middle of the Catalytic Cycle.
J.Mol.Biol., 352, 2005
2GTL
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BU of 2gtl by Molmil
Lumbricus Erythrocruorin at 3.5A resolution
Descriptor: CALCIUM ION, CARBON MONOXIDE, Extracellular globin 2, ...
Authors:Royer Jr, W.E, Sharma, H, Strand, K, Knapp, J.E, Bhyravbhatla, B.
Deposit date:2006-04-28
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Lumbricus erythrocruorin at 3.5 a resolution: architecture of a megadalton respiratory complex.
Structure, 14, 2006
2H63
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BU of 2h63 by Molmil
Crystal Structure of Human Biliverdin Reductase A
Descriptor: Biliverdin reductase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kavanagh, K, Elkins, J, Ugochukwu, E, Guo, K, Pilka, E, Lukacik, P, Smee, C, Papagrigoriou, E, Bunkoczi, G, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, von Delft, F, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2006-05-30
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Human Biliverdin Reductase A
To be Published
1F4H
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BU of 1f4h by Molmil
E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC)
Descriptor: BETA-GALACTOSIDASE, MAGNESIUM ION
Authors:Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
Deposit date:2000-06-07
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
1F4A
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BU of 1f4a by Molmil
E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC)
Descriptor: BETA-GALACTOSIDASE, MAGNESIUM ION
Authors:Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
Deposit date:2000-06-07
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
2H89
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Avian Respiratory Complex II with Malonate Bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
Deposit date:2006-06-06
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
1LW6
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BU of 1lw6 by Molmil
Crystal Structure of the Complex of Subtilisin BPN' with Chymotrypsin Inhibitor 2 at 1.5 Angstrom Resolution
Descriptor: CALCIUM ION, SUBTILISIN BPN', SUBTILISIN-CHYMOTRYPSIN INHIBITOR-2A, ...
Authors:Radisky, E.S, Koshland JR, D.E.
Deposit date:2002-05-30
Release date:2002-08-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A clogged gutter mechanism for protease inhibitors.
Proc.Natl.Acad.Sci.USA, 99, 2002
2ACT
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BU of 2act by Molmil
CRYSTALLOGRAPHIC REFINEMENT OF THE STRUCTURE OF ACTINIDIN AT 1.7 ANGSTROMS RESOLUTION BY FAST FOURIER LEAST-SQUARES METHODS
Descriptor: ACTINIDIN PRECURSOR, AMMONIUM ION
Authors:Baker, E.N.
Deposit date:1979-11-27
Release date:1980-03-07
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic Refinement of the Structure of Actinidin at 1.7 Angstroms Resolution by Fast Fourier Least-Squares Methods
Acta Crystallogr.,Sect.A, 36, 1980
2PYB
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BU of 2pyb by Molmil
Napa protein from borrelia burgdorferi
Descriptor: FE (III) ION, Neutrophil activating protein
Authors:Zanotti, G, Papinutto, E, De Bernard, M.
Deposit date:2007-05-16
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and immunomodulatory property relationship in NapA of Borrelia burgdorferi.
Biochim.Biophys.Acta, 1804, 2010
2PI2
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BU of 2pi2 by Molmil
Full-length Replication protein A subunits RPA14 and RPA32
Descriptor: 1,4-DIETHYLENE DIOXIDE, Replication protein A 14 kDa subunit, Replication protein A 32 kDa subunit
Authors:Deng, X, Borgstahl, G.E.
Deposit date:2007-04-12
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Full-length Human RPA14/32 Complex Gives Insights into the Mechanism of DNA Binding and Complex Formation.
J.Mol.Biol., 374, 2007
2PIP
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BU of 2pip by Molmil
Androgen receptor LBD with small molecule
Descriptor: 1-TERT-BUTYL-3-(2,5-DIMETHYLBENZYL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE, 1H-INDOLE-3-CARBOXYLIC ACID, 5-ALPHA-DIHYDROTESTOSTERONE, ...
Authors:Estebanez-Perpina, E, Arnold, A.A, Baxter, J.D, Webb, P, Guy, R.K, Fletterick, K.R.
Deposit date:2007-04-13
Release date:2007-09-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A surface on the androgen receptor that allosterically regulates coactivator binding.
Proc.Natl.Acad.Sci.Usa, 104, 2007
284D
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BU of 284d by Molmil
THE BI-LOOP, A NEW GENERAL FOUR-STRANDED DNA MOTIF
Descriptor: BARIUM ION, DNA (5'-CD(*P*AP*TP*TP*CP*AP*TP*TP*C)-3'), SODIUM ION
Authors:Salisbury, S.A, Wilson, S.E, Powell, H.R, Kennard, O, Lubini, P, Sheldrick, G.M, Escaja, N, Alazzouzi, E, Grandas, A, Pedroso, E.
Deposit date:1996-09-11
Release date:1997-06-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The bi-loop, a new general four-stranded DNA motif.
Proc.Natl.Acad.Sci.USA, 94, 1997
2PL8
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BU of 2pl8 by Molmil
D(GTATACC) under hydrostatic pressure of 1.04 GPa
Descriptor: 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3', SPERMINE
Authors:Prange, T, Girard, E, Fourme, R, Kahn, R.
Deposit date:2007-04-19
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
2Q4H
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BU of 2q4h by Molmil
Ensemble refinement of the crystal structure of GALT-like protein from Arabidopsis thaliana At5g18200
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Probable galactose-1-phosphate uridyl transferase, ...
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.834 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
2PPI
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BU of 2ppi by Molmil
Structure of the BTB (Tramtrack and Bric a brac) domain of human Gigaxonin
Descriptor: Gigaxonin
Authors:Amos, A, Turnbull, A.P, Tickle, J, Keates, T, Bullock, A, Savitsky, P, Burgess-Brown, N, Debreczeni, J.E, Ugochukwu, E, Umeano, C, Pike, A.C.W, Papagrigoriou, E, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2007-04-30
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the BTB (Tramtrack and Bric a brac) domain of human Gigaxonin.
To be Published
1U1E
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BU of 1u1e by Molmil
Structure of e. coli uridine phosphorylase complexed to 5(phenylseleno)acyclouridine (PSAU)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-(PHENYLSELANYL)PYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1C
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Structure of E. coli uridine phosphorylase complexed to 5-benzylacyclouridine (BAU)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
2N34
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BU of 2n34 by Molmil
NMR assignments and solution structure of the JAK interaction region of SOCS5
Descriptor: Suppressor of cytokine signaling 5
Authors:Chandrashekaran, I.R, Mohanty, B, Linossi, E.M, Nicholson, S.E, Babon, J, Norton, R.S, Dagley, L.F, Leung, E.W.W, Murphy, J.M.
Deposit date:2015-05-21
Release date:2015-07-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Functional Characterization of the Conserved JAK Interaction Region in the Intrinsically Disordered N-Terminus of SOCS5.
Biochemistry, 54, 2015
2PNJ
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BU of 2pnj by Molmil
Crystal structure of human ferrochelatase mutant with Phe 337 replaced by Ala
Descriptor: CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, Ferrochelatase, ...
Authors:Dailey, H.A, Wu, C.-K, Horanyi, P, Medlock, A.E, Najahi-Missaoui, W, Burden, A.E, Dailey, T.A, Rose, J.P.
Deposit date:2007-04-24
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Altered orientation of active site residues in variants of human ferrochelatase. Evidence for a hydrogen bond network involved in catalysis
Biochemistry, 46, 2007
2KNE
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BU of 2kne by Molmil
Calmodulin wraps around its binding domain in the plasma membrane CA2+ pump anchored by a novel 18-1 motif
Descriptor: ATPase, Ca++ transporting, plasma membrane 4, ...
Authors:Juranic, N, Atanasova, E, Filoteo, A.G, Macura, S, Prendergast, F.G, Penniston, J.T, Strehler, E.E.
Deposit date:2009-08-21
Release date:2009-11-24
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Calmodulin wraps around its binding domain in the plasma membrane Ca2+ pump anchored by a novel 18-1 motif.
J.Biol.Chem., 285, 2010
2PQK
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X-ray crystal structure of human Mcl-1 in complex with Bim BH3
Descriptor: Bim BH3 peptide, Induced myeloid leukemia cell differentiation protein Mcl-1, SODIUM ION, ...
Authors:Bare, E, Grant, R.A, Keating, A.E.
Deposit date:2007-05-02
Release date:2007-06-19
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mcl-1-Bim complexes accommodate surprising point mutations via minor structural changes.
Protein Sci., 19, 2010
2PSR
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BU of 2psr by Molmil
HUMAN PSORIASIN (S100A7) CA2+ AND ZN2+ BOUND FORM (CRYSTAL FORM II)
Descriptor: CALCIUM ION, PSORIASIN, ZINC ION
Authors:Brodersen, D.E, Nyborg, J, Kjeldgaard, M.
Deposit date:1998-09-17
Release date:1999-06-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Zinc-binding site of an S100 protein revealed. Two crystal structures of Ca2+-bound human psoriasin (S100A7) in the Zn2+-loaded and Zn2+-free states.
Biochemistry, 38, 1999

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