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PDB: 40736 results

6WL3
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BU of 6wl3 by Molmil
preTCRbeta-pMHC complex crystal structure
Descriptor: ARG-GLY-TYR-LEU-TYR-GLN-GLY-LEU, H-2 class I histocompatibility antigen, K-B alpha chain, ...
Authors:Li, X, Mallis, R.J, Mizsei, R, Tan, K, Reinherz, E.L, Wang, J.
Deposit date:2020-04-18
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Pre-T cell receptors topologically sample self-ligands during thymocyte beta-selection.
Science, 371, 2021
6GMP
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BU of 6gmp by Molmil
CRYSTAL STRUCTURE OF THE PPIASE DOMAIN OF TBPAR42
Descriptor: PARVULIN 42
Authors:Hoenig, D, Rute, A, Hofmann, E, Bayer, P, Gasper, R.
Deposit date:2018-05-28
Release date:2019-03-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Analysis of the 42 kDa Parvulin ofTrypanosoma brucei.
Biomolecules, 9, 2019
6X4T
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BU of 6x4t by Molmil
Crystal structure of ICOS-L in complex with Prezalumab and VNAR domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Rujas, E, Sicard, T, Julien, J.P.
Deposit date:2020-05-23
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural characterization of the ICOS/ICOS-L immune complex reveals high molecular mimicry by therapeutic antibodies.
Nat Commun, 11, 2020
6RJ8
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BU of 6rj8 by Molmil
Structure of the alpha-beta hydrolase CorS from Tabernathe iboga
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, ...
Authors:Farrow, S.C, Caputi, L, Kamileen, M.O, Bussey, K, Stevenson, C.E.M, Mundy, J, Lawson, D.M, O'Connor, S.E.
Deposit date:2019-04-26
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural basis of cycloaddition in biosynthesis of iboga and aspidosperma alkaloids.
Nat.Chem.Biol., 16, 2020
4Y9X
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BU of 4y9x by Molmil
Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate-glucose (UDP-Glc) and phosphoglyceric acid (PGA) - GpgS Mn2+ UDP-Glc PGA-3
Descriptor: 1,2-ETHANEDIOL, 3-PHOSPHOGLYCERIC ACID, CHLORIDE ION, ...
Authors:Albesa-Jove, D, Rodrigo-Unzueta, A, Cifuente, J.O, Urresti, S, Comino, N, Sancho-Vaello, E, Guerin, M.E.
Deposit date:2015-02-17
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.637 Å)
Cite:A Native Ternary Complex Trapped in a Crystal Reveals the Catalytic Mechanism of a Retaining Glycosyltransferase.
Angew.Chem.Int.Ed.Engl., 54, 2015
6RV4
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BU of 6rv4 by Molmil
Crystal structure of the human two pore domain potassium ion channel TASK-1 (K2P3.1) in a closed conformation with a bound inhibitor BAY 2341237
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, POTASSIUM ION, ...
Authors:Rodstrom, K.E.J, Pike, A.C.W, Zhang, W, Quigley, A, Speedman, D, Mukhopadhyay, S.M.M, Shrestha, L, Chalk, R, Venkaya, S, Bushell, S.R, Tessitore, A, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2019-05-30
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A lower X-gate in TASK channels traps inhibitors within the vestibule.
Nature, 582, 2020
6GS2
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BU of 6gs2 by Molmil
Crystal Structure of the GatD/MurT Enzyme Complex from Staphylococcus aureus
Descriptor: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, SA1707 protein, ...
Authors:Muckenfuss, L.M, Noeldeke, E.R, Niemann, V, Zocher, G, Stehle, T.
Deposit date:2018-06-13
Release date:2018-09-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural basis of cell wall peptidoglycan amidation by the GatD/MurT complex of Staphylococcus aureus.
Sci Rep, 8, 2018
5WCB
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BU of 5wcb by Molmil
Katanin hexamer in the ring conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Meiotic spindle formation protein mei-1
Authors:Zehr, E.A, Szyk, A, Piszczek, G, Szczesna, E, Zuo, X, Roll-Mecak, A.
Deposit date:2017-06-29
Release date:2017-08-09
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Katanin spiral and ring structures shed light on power stroke for microtubule severing.
Nat. Struct. Mol. Biol., 24, 2017
6H65
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BU of 6h65 by Molmil
Crystal structure of the branched-chain-amino-acid aminotransferase from Haliangium ochraceum
Descriptor: Branched-chain-amino-acid aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Boyko, K.M, Timofeev, V.I, Bezsudnova, E.Y, Nikolaeva, A.Y, Rakitina, T.V, Popov, V.O.
Deposit date:2018-07-26
Release date:2018-10-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the branched-chain-amino-acid aminotransferase from Haliangium ochraceum
To Be Published
6Z7Z
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BU of 6z7z by Molmil
Porcine insulin in complex with the analytical antibody OXI-005 Fab
Descriptor: Insulin, MAGNESIUM ION, OXI-005 Fab Heavy chain, ...
Authors:Johansson, E.
Deposit date:2020-06-02
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insulin binding to the analytical antibody sandwich pair OXI-005 and HUI-018: Epitope mapping and binding properties.
Protein Sci., 30, 2021
4YST
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BU of 4yst by Molmil
Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 24.9 MGy
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ...
Authors:Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
6WKX
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BU of 6wkx by Molmil
Cryo-EM of Form 1 related peptide filament, 15-10-3
Descriptor: peptide 15-10-3
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WMF
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BU of 6wmf by Molmil
Human Sun2-KASH5 complex
Descriptor: POTASSIUM ION, Protein KASH5, SUN domain-containing protein 2
Authors:Cruz, V.E, Schwartz, T.U.
Deposit date:2020-04-21
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analysis of Different LINC Complexes Reveals Distinct Binding Modes.
J.Mol.Biol., 432, 2020
6TA1
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BU of 6ta1 by Molmil
Fatty acid synthase of S. cerevisiae
Descriptor: FLAVIN MONONUCLEOTIDE, Fatty acid synthase subunit alpha, Fatty acid synthase subunit beta, ...
Authors:Vonck, J, D'Imprima, E, Joppe, M, Grininger, M.
Deposit date:2019-10-29
Release date:2019-11-06
Last modified:2020-05-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The resolution revolution in cryoEM requires high-quality sample preparation: a rapid pipeline to a high-resolution map of yeast fatty acid synthase.
Iucrj, 7, 2020
8OW6
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BU of 8ow6 by Molmil
PERIDININ-CHLOROPHYLL-PROTEIN OF HETEROCAPSA PYGMAEA, 100K
Descriptor: CHLORIDE ION, CHLOROPHYLL A, PERIDININ, ...
Authors:Hofmann, E, Schulte, T.
Deposit date:2023-04-27
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural and Spectroscopic Characterization of the Peridinin-Chlorophyll a-Protein (PCP) Complex from Heterocapsa pygmaea (HPPCP)
To Be Published
1Y4D
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BU of 1y4d by Molmil
Crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 M59R/E60S mutant
Descriptor: CALCIUM ION, SODIUM ION, chymotrypsin inhibitor 2, ...
Authors:Radisky, E.S, Lu, C.J, Kwan, G, Koshland Jr, D.E.
Deposit date:2004-11-30
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of the intramolecular hydrogen bond network in the inhibitory power of chymotrypsin inhibitor 2
Biochemistry, 44, 2005
4Z2B
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BU of 4z2b by Molmil
The structure of human PDE12 residues 161-609 in complex with GSK3036342A
Descriptor: 1,2-ETHANEDIOL, 2',5'-phosphodiesterase 12, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Nolte, R.T, Wisely, B, Wang, L, Wood, E.R.
Deposit date:2015-03-29
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors.
J.Biol.Chem., 290, 2015
4Z3U
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BU of 4z3u by Molmil
PRV nuclear egress complex
Descriptor: CHLORIDE ION, SODIUM ION, UL31, ...
Authors:Bigalke, J.M, Heldwein, E.E.
Deposit date:2015-03-31
Release date:2015-11-11
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structural basis of membrane budding by the nuclear egress complex of herpesviruses.
Embo J., 34, 2015
6TMP
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BU of 6tmp by Molmil
Rapid optimisation of fragments and hits to lead compounds from screening of crude reaction mixtures
Descriptor: MAGNESIUM ION, N-(2-AMINOETHYL)-2-{3-CHLORO-4-[(4-ISOPROPYLBENZYL)OXY]PHENYL} ACETAMIDE, [2,4-bis(oxidanyl)phenyl]-[(1~{R})-6,7-dimethoxy-1-pyridin-3-yl-3,4-dihydro-1~{H}-isoquinolin-2-yl]methanone, ...
Authors:Baker, L.M, Aimon, A, Murray, J.B, Surgenor, A.E, Matassova, N, Roughley, S.D, von Delft, F, Hubbard, R.E.
Deposit date:2019-12-05
Release date:2020-10-14
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.076 Å)
Cite:Rapid optimisation of fragments and hits to lead compounds from screening of crude reaction mixtures
Commun Chem, 2020
3GJE
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BU of 3gje by Molmil
Rational development of high-affinity T-cell receptor-like antibodies
Descriptor: Fab Heavy Chain, Fab Light Chain
Authors:Stewart-Jones, G, Wadle, A, Hombach, A, Shenderov, E, Held, G, Fischer, E, Kleber, S, Stenner-Liewen, F, Bauer, S, McMichael, A, Knuth, A, Abken, H, Hombach, A.A, Cerundolo, V, Jones, E.Y, Renner, C.
Deposit date:2009-03-08
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Rational development of high-affinity T-cell receptor-like antibodies
Proc.Natl.Acad.Sci.USA, 106, 2009
8VU6
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BU of 8vu6 by Molmil
Wheat Germ Agglutinin (WGA) domain A
Descriptor: Agglutinin isolectin 1
Authors:Titaux-Delgado, G.A, del Rio-Portilla, F, Garcia-Hernandez, E.
Deposit date:2024-01-29
Release date:2024-06-05
Method:SOLUTION NMR
Cite:Decoding the mechanism governing the structural stability of wheat germ agglutinin and its isolated domains: A combined calorimetric, NMR, and MD simulation study.
Protein Sci., 33, 2024
6GCU
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BU of 6gcu by Molmil
MET receptor in complex with InlB internalin domain and DARPin A3A
Descriptor: DARPin A3A, Hepatocyte growth factor receptor, Internalin B
Authors:Meyer, T, Andres, F, Iamele, L, Gherardi, E, Pluckthun, A, Niemann, H.H.
Deposit date:2018-04-19
Release date:2019-05-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (6.001 Å)
Cite:Inhibition of the MET Kinase Activity and Cell Growth in MET-Addicted Cancer Cells by Bi-Paratopic Linking.
J.Mol.Biol., 431, 2019
6G9B
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BU of 6g9b by Molmil
Crystal structure of Ebolavirus glycoprotein in complex with imipramine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(5H-DIBENZO[B,F]AZEPIN-5-YL)-N,N-DIMETHYLPROPAN-1-AMINE, ...
Authors:Zhao, Y, Ren, J, Fry, E.E, Xiao, J, Townsend, A.R, Stuart, D.I.
Deposit date:2018-04-10
Release date:2018-05-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structures of Ebola Virus Glycoprotein Complexes with Tricyclic Antidepressant and Antipsychotic Drugs.
J. Med. Chem., 61, 2018
8VU8
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BU of 8vu8 by Molmil
Wheat Germ Agglutinin (WGA) domain D
Descriptor: Agglutinin isolectin 3
Authors:Titaux-Delgado, G.A, del Rio-Portilla, F, Garcia-Hernandez, E.
Deposit date:2024-01-29
Release date:2024-06-05
Method:SOLUTION NMR
Cite:Decoding the mechanism governing the structural stability of wheat germ agglutinin and its isolated domains: A combined calorimetric, NMR, and MD simulation study.
Protein Sci., 33, 2024
6WL1
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BU of 6wl1 by Molmil
Cryo-EM of Form 1 related peptide filament, 36-31-3
Descriptor: peptide 36-31-3
Authors:Wang, F, Gnewou, O.M, Modlin, C, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021

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