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PDB: 40736 件

3G1L
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EthR from Mycobacterium tuberculosis in complex with compound BDM14744
分子名称: 3-(4-fluorophenyl)-5-phenyl-4H-1,2,4-triazole, TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN (TETR-FAMILY) ETHR
著者Willand, N, Dirie, B, Carette, X, Bifani, P, Singhal, A, Desroses, M, Leroux, F, Willery, E, Mathys, V, Deprez-Poulain, R, Delcroix, G, Frenois, F, Aumercier, M, Locht, C, Villeret, V, Deprez, B, Baulard, A.R.
登録日2009-01-30
公開日2009-07-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Synthetic EthR inhibitors boost antituberculous activity of ethionamide.
Nat.Med. (N.Y.), 15, 2009
6TRP
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Solution Structure of Docking Domain Complex of Pax NRPS: PaxC NDD - PaxB CDD
分子名称: Peptide synthetase XpsB,Peptide synthetase XpsB
著者Watzel, J, Hacker, C, Duchardt-Ferner, E, Bode, H.B, Woehnert, J.
登録日2019-12-19
公開日2020-08-12
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献A New Docking Domain Type in the Peptide-Antimicrobial-Xenorhabdus Peptide Producing Nonribosomal Peptide Synthetase fromXenorhabdus bovienii.
Acs Chem.Biol., 15, 2020
3G6S
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Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D
分子名称: Putative endonuclease/exonuclease/phosphatase family protein
著者Forouhar, F, Lew, S, Seetharaman, J, Xiao, R, Sahdev, S, Foote, E.L, Ciccosanti, C, Wang, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2009-02-08
公開日2009-02-17
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus.
To be Published
1ACF
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ACANTHAMOEBA CASTELLANII PROFILIN IB
分子名称: PROFILIN I
著者Fedorov, A.A, Magnus, K.A, Graupe, M.H, Lattman, E.E, Pollard, T.D, Almo, S.C.
登録日1994-07-29
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structures of isoforms of the actin-binding protein profilin that differ in their affinity for phosphatidylinositol phosphates.
Proc.Natl.Acad.Sci.USA, 91, 1994
4U1G
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Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to monoclonal antibody QA1
分子名称: QA1 monoclonal antibody heavy chain, QA1 monoclonal antibody light chain, Reticulocyte binding protein 5
著者Wright, K.E, Hjerrild, K.A, Bartlett, J, Douglas, A.D, Jin, J, Brown, R.E, Ashfield, R, Clemmensen, S.B, de Jongh, W.A, Draper, S.J, Higgins, M.K.
登録日2014-07-15
公開日2014-08-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of malaria invasion protein RH5 with erythrocyte basigin and blocking antibodies.
Nature, 515, 2014
1AFV
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HIV-1 CAPSID PROTEIN (P24) COMPLEX WITH FAB25.3
分子名称: ANTIBODY FAB25.3 FRAGMENT (HEAVY CHAIN), ANTIBODY FAB25.3 FRAGMENT (LIGHT CHAIN), HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 CAPSID PROTEIN, ...
著者Momany, C, Kovari, L.C, Prongay, A.J, Keller, W, Gitti, R.K, Lee, B.M, Gorbalenya, A.E, Tong, L, Mcclure, J, Ehrlich, L.S, Summers, M.F, Carter, C, Rossmann, M.G.
登録日1997-03-14
公開日1997-08-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal structure of dimeric HIV-1 capsid protein.
Nat.Struct.Biol., 3, 1996
7M5O
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Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA
分子名称: CasPhi, ZINC ION, crRNA
著者Pausch, P, Soczek, K, Nogales, E, Doudna, J.
登録日2021-03-24
公開日2021-08-04
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献DNA interference states of the hypercompact CRISPR-Cas Phi effector.
Nat.Struct.Mol.Biol., 28, 2021
3FRZ
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Crystal Structure of HCV NS5B RNA polymerase in complex with PF868554
分子名称: (6R)-6-cyclopentyl-6-[2-(2,6-diethylpyridin-4-yl)ethyl]-3-[(5,7-dimethyl[1,2,4]triazolo[1,5-a]pyrimidin-2-yl)methyl]-4-hydroxy-5,6-dihydro-2H-pyran-2-one, BETA-MERCAPTOETHANOL, N-[(benzyloxy)carbonyl]-L-alpha-glutamyl-N-[(1S)-4-oxo-4-phenyl-1-propylbut-2-en-1-yl]-L-phenylalaninamide, ...
著者Parge, H.E.
登録日2009-01-08
公開日2009-03-10
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Discovery of (R)-6-cyclopentyl-6-(2-(2,6-diethylpyridin-4-yl)ethyl)-3-((5,7-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-2-yl)methyl)-4-hydroxy-5,6-dihydropyran-2-one (PF-00868554) as a potent and orally available hepatitis C virus polymerase inhibitor.
J.Med.Chem., 52, 2009
3FXB
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Crystal structure of the ectoine-binding protein UehA
分子名称: (4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, TRAP dicarboxylate transporter, DctP subunit
著者Lecher, J, Pittelkow, M, Bursy, J, Smits, S.H.J, Schmitt, L, Bremer, E.
登録日2009-01-20
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of UehA in complex with ectoine-A comparison with other TRAP-T binding proteins.
J.Mol.Biol., 389, 2009
1A1H
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QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), QGSR ZINC FINGER PEPTIDE, ...
著者Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
登録日1997-12-10
公開日1998-06-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
3FZC
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OXA-24 beta-lactamase complex with SA3-53 inhibitor
分子名称: (2S,3R)-4-(2-aminoethylcarbamoyloxy)-2-[(2-methanoylindolizin-3-yl)amino]-3-methyl-3-sulfino-butanoic acid, Beta-lactamase OXA-24, TETRAETHYLENE GLYCOL
著者Romero, A, Santillana, E.
登録日2009-01-24
公開日2010-02-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase.
J.Am.Chem.Soc., 132, 2010
1A1R
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HCV NS3 PROTEASE DOMAIN:NS4A PEPTIDE COMPLEX
分子名称: NS3 PROTEIN, NS4A PROTEIN, ZINC ION
著者Kim, J.L, Morgenstern, K.A, Lin, C, Fox, T, Dwyer, M.D, Landro, J.A, Chambers, S.P, Markland, W, Lepre, C.A, O'Malley, E.T, Harbeson, S.L, Rice, C.M, Murcko, M.A, Caron, P.R, Thomson, J.A.
登録日1997-12-15
公開日1998-06-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide.
Cell(Cambridge,Mass.), 87, 1996
6U4X
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Crystal structure of Equine Serum Albumin complex with ibuprofen
分子名称: IBUPROFEN, SULFATE ION, Serum albumin, ...
著者Czub, M.P, Handing, K.B, Venkataramany, B.S, Steen, E.H, Shabalin, I.G, Satchell, K.J, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-08-26
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Albumin-Based Transport of Nonsteroidal Anti-Inflammatory Drugs in Mammalian Blood Plasma.
J.Med.Chem., 63, 2020
2Q20
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Structure of the germline Vk1 O18/O8 light chain variable domain homodimer
分子名称: Vk1 O18/O8 germline light chain variable domain
著者Thompson, J.R, Ramirez-Alvarado, M, Baden, E.M.
登録日2007-05-25
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem., 283, 2008
7MRW
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Native RhopH complex of the malaria parasite Plasmodium falciparum
分子名称: Cytoadherence linked asexual protein 3.1, High molecular weight rhoptry protein 2, High molecular weight rhoptry protein 3
著者Ho, C.M, Jih, J, Lai, M, Li, X.R, Goldberg, D.E, Beck, J.R, Zhou, Z.H.
登録日2021-05-10
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Native structure of the RhopH complex, a key determinant of malaria parasite nutrient acquisition.
Proc.Natl.Acad.Sci.USA, 118, 2021
6U32
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Crystal structure of HaloTag bound to tetramethylrhodamine-HaloTag ligand
分子名称: 9-[2-carboxy-5-({2-[2-(hexyloxy)ethoxy]ethyl}carbamoyl)phenyl]-6-(dimethylamino)-N,N-dimethyl-3H-xanthen-3-iminium, CHLORIDE ION, HaloTag
著者Berro, A.J, Schreiter, E.R.
登録日2019-08-21
公開日2020-09-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The HaloTag as a general scaffold for far-red tunable chemigenetic indicators.
Nat.Chem.Biol., 17, 2021
2PFS
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Crystal structure of universal stress protein from Nitrosomonas europaea
分子名称: CHLORIDE ION, Universal stress protein
著者Chruszcz, M, Evdokimova, E, Cymborowski, M, Kagan, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2007-04-05
公開日2007-05-08
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and functional insight into the universal stress protein family.
Evol Appl, 6, 2013
6U95
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Adeno-associated virus strain AAVhu.37 capsid icosahedral structure
分子名称: Capsid protein VP1
著者Kaelber, J.T, Yost, S.A, Firlar, E, Mercer, A.C.
登録日2019-09-06
公開日2019-09-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Structure of the AAVhu.37 capsid by cryoelectron microscopy.
Acta Crystallogr.,Sect.F, 76, 2020
6UA3
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Human Mcl-1 in complex with a modified Bim BH3 peptide
分子名称: Induced myeloid leukemia cell differentiation protein Mcl-1, modified Bim BH3 peptide
著者Mandal, T, Grant, R.A, Keating, A.E.
登録日2019-09-10
公開日2020-09-16
実験手法X-RAY DIFFRACTION (1.552 Å)
主引用文献Inhibitor peptides against Mcl-1 containing non-natural amino acids show potent apoptotic response.
To Be Published
3FR4
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N-Benzyl-indolo carboxylic acids: Design and synthesis of potent and selective adipocyte Fatty-Acid Binding Protein (A-FABP) inhibitors
分子名称: 9-[2-(trifluoromethyl)benzyl]-2,3,4,9-tetrahydro-1H-carbazole-8-carboxylic acid, Fatty acid-binding protein, adipocyte
著者Barf, T, Hammer, K, Lehmann, F, Haile, S, Axen, E, Medina, C, Uppenberg, J, Svensson, S, Rondahl, L, Lundb ck, T.
登録日2009-01-08
公開日2009-03-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献N-Benzyl-indolo carboxylic acids: Design and synthesis of potent and selective adipocyte fatty-acid binding protein (A-FABP) inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
2PZU
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Crystal structure of Staphylococcal nuclease variant V66N/P117G/H124L/S128A at cryogenic temperature
分子名称: PHOSPHATE ION, Thermonuclease
著者Schlessman, J.L, Abe, C, Garcia-Moreno, E.B.
登録日2007-05-18
公開日2008-05-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic study of hydration of an internal cavity in engineered proteins with buried polar or ionizable groups.
Biophys.J., 94, 2008
2Q5G
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Ligand binding domain of PPAR delta receptor in complex with a partial agonist
分子名称: Peroxisome proliferator-activated receptor delta, [(7-{[2-(3-MORPHOLIN-4-YLPROP-1-YN-1-YL)-6-{[4-(TRIFLUOROMETHYL)PHENYL]ETHYNYL}PYRIDIN-4-YL]THIO}-2,3-DIHYDRO-1H-INDEN- 4-YL)OXY]ACETIC ACID
著者Pettersson, I, Sauerberg, P, Johansson, E, Hoffman, I, Tari, L.W, Hunter, M.J, Nix, J.
登録日2007-06-01
公開日2008-06-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Design of a partial PPARdelta agonist.
Bioorg.Med.Chem.Lett., 17, 2007
1A1I
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RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), RADR ZIF268 ZINC FINGER PEPTIDE, ...
著者Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
登録日1997-12-10
公開日1998-06-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1G
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DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'), DSNR ZINC FINGER PEPTIDE, ...
著者Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
登録日1997-12-10
公開日1998-06-10
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1K
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RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*CP*CP*AP*CP*GP*C)-3'), RADR ZIF268 VARIANT, ...
著者Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
登録日1997-12-10
公開日1998-06-10
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998

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