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PDB: 40736 件

2Q1H
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Ancestral Corticoid Receptor in Complex with Aldosterone
分子名称: ALDOSTERONE, AncCR, GLYCEROL, ...
著者Ortlund, E.A, Bridgham, J.T, Redinbo, M.R, Thornton, J.W.
登録日2007-05-24
公開日2007-09-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an ancient protein: evolution by conformational epistasis.
Science, 317, 2007
6U41
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1.7 angstrom structure of a pathogenic human Syt 1 C2B (D304G)
分子名称: SULFATE ION, Synaptotagmin-1
著者Dominguez, M.J, Bradberry, M.M, Chapman, E.R, Sutton, R.B.
登録日2019-08-22
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder.
Neuron, 107, 2020
6U45
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Crystal structure of Methanoperedens nitroreducens elongation factor 2 bound to GMPPCP and magnesium
分子名称: CHLORIDE ION, Elongation factor 2, MAGNESIUM ION, ...
著者Fenwick, M.K, Ealick, S.E.
登録日2019-08-22
公開日2020-03-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of elongation factor 2 switching
Curr Res Struct Biol, 2, 2020
6TYR
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Crystal structure of Laccase from Thermus thermophilus HB27 with a close conformation of its beta-hairpin
分子名称: CITRIC ACID, COPPER (II) ION, GLYCEROL, ...
著者Miranda-Blancas, R, Rudino-Pinera, E.
登録日2019-08-09
公開日2020-08-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.813 Å)
主引用文献The beta-hairpin from the Thermus thermophilus HB27 laccase works as a pH-dependent switch to regulate laccase activity.
J.Struct.Biol., 213, 2021
2Q2A
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Crystal structures of the arginine-, lysine-, histidine-binding protein ArtJ from the thermophilic bacterium Geobacillus stearothermophilus
分子名称: ARGININE, ArtJ, SULFATE ION
著者Vahedi-Faridi, A, Scheffel, F, Eckey, V, Saenger, W, Schneider, E.
登録日2007-05-26
公開日2008-01-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structures and mutational analysis of the arginine-, lysine-, histidine-binding protein ArtJ from Geobacillus stearothermophilus. Implications for interactions of ArtJ with its cognate ATP-binding cassette transporter, Art(MP)2
J.Mol.Biol., 375, 2008
2Q32
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Crystal structure of human heme oxygenase-2 C127A (HO-2)
分子名称: Heme oxygenase 2, OXTOXYNOL-10
著者Bianchetti, C.M, Bingman, C.A, Bitto, E, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2007-05-29
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Comparison of Apo- and Heme-bound Crystal Structures of a Truncated Human Heme Oxygenase-2.
J.Biol.Chem., 282, 2007
2PG6
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Crystal Structure of Human Microsomal P450 2A6 L240C/N297Q
分子名称: Cytochrome P450 2A6, PROTOPORPHYRIN IX CONTAINING FE
著者Sansen, S, Hsu, M.H, Stout, C.D, Johnson, E.F.
登録日2007-04-06
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Structural insight into the altered substrate specificity of human cytochrome P450 2A6 mutants.
Arch.Biochem.Biophys., 464, 2007
6E09
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Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
分子名称: Methyl-accepting chemotaxis protein TlpA
著者Remington, S.J, Guillemin, K, Sweeney, E, Perkins, A.
登録日2018-07-06
公開日2018-09-12
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.
Protein Sci., 27, 2018
6U1T
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Crystal structure of anti-Nipah virus (NiV) F 5B3 antibody Fab fragment
分子名称: CHLORIDE ION, antigen-binding (Fab) fragment, heavy chain, ...
著者Dang, H.V, Chan, Y.P, Park, Y.J, Snijder, J, Da Silva, S.C, Vu, B, Yan, L, Feng, Y.R, Rockx, B, Geisbert, T, Mire, C, Mire, C.E, BBroder, C.C, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-08-16
公開日2019-10-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.483 Å)
主引用文献An antibody against the F glycoprotein inhibits Nipah and Hendra virus infections.
Nat.Struct.Mol.Biol., 26, 2019
7M2L
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The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.60 Angstrom resolution. Two of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring
分子名称: 1,2-ETHANEDIOL, 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, CHLORIDE ION, ...
著者Hilario, E, Dunn, M.F, Mueller, L.J.
登録日2021-03-16
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.60 Angstrom resolution.
To be Published
4NDO
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Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
分子名称: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI), ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Poppe, J, Warkentin, E, Demmer, U, Ermler, U.
登録日2013-10-27
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.
J.Inorg.Biochem., 138, 2014
5A0E
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Crystal structure of cyclophilin D in complex with CsA analogue, JW47.
分子名称: JW47, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE F, MITOCHONDRIAL
著者Warne, J, Pryce, G, Hill, J, Shi, X, Lenneras, F, Puentes, F, Kip, M, Hilditch, L, Walker, P, Simone, M, Chan, A.W.E, Towers, G, Coker, A.R, Duchen, M, Szabadkai, G, Baker, D, Selwood, D.L.
登録日2015-04-19
公開日2015-12-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Selective Inhibition of the Mitochondrial Permeability Transition Pore Protects Against Neuro-Degeneration in Experimental Multiple Sclerosis.
J.Biol.Chem., 291, 2016
6U4U
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1.3 A structure of a pathogenic human Syt 1 C2B (I368T)
分子名称: SULFATE ION, Synaptotagmin-1
著者Dominguez, M.J, Bradberry, M.M, Chapman, E.R, Sutton, R.B.
登録日2019-08-26
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder.
Neuron, 107, 2020
7MBP
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Cryo-EM structure of zebrafish TRPM5 in the presence of 1 mM EDTA
分子名称: (25R)-14beta,17beta-spirost-5-en-3beta-ol, (2R)-2-(hydroxymethyl)-4-{[(25R)-10alpha,14beta,17beta-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ruan, Z, Lu, W, Du, J, Haley, E.
登録日2021-04-01
公開日2021-09-22
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of the TRPM5 channel elucidate mechanisms of activation and inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7M3S
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BU of 7m3s by Molmil
The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.55 Angstrom resolution. One of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring
分子名称: 1,2-ETHANEDIOL, 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, CHLORIDE ION, ...
著者Hilario, E, Dunn, M.F, Mueller, L.J.
登録日2021-03-18
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.55 Angstrom resolution. One of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring.
To be Published
7MLV
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Cryo-EM reveals partially and fully assembled native glycine receptors,homomeric tetramer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3D1 Fab Heavy Chain, 3D1 Fab Light Chain, ...
著者Zhu, H, Gouaux, E.
登録日2021-04-29
公開日2021-09-29
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Architecture and assembly mechanism of native glycine receptors.
Nature, 599, 2021
6E1K
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Structure of AtTPC1(DDE) reconstituted in saposin A with cat06 Fab
分子名称: CALCIUM ION, PALMITIC ACID, Two pore calcium channel protein 1, ...
著者Kintzer, A.F, Green, E.M, Cheng, Y, Stroud, R.M.
登録日2018-07-10
公開日2018-09-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for activation of voltage sensor domains in an ion channel TPC1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7MLY
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Cryo-EM reveals partially and fully assembled native glycine receptors,heteromeric pentamer
分子名称: 3D1 Fab Heavy Chain, 3D1 Fab Light Chain, DECANE, ...
著者Zhu, H, Gouaux, E.
登録日2021-04-29
公開日2021-09-29
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Architecture and assembly mechanism of native glycine receptors.
Nature, 599, 2021
4NO2
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Crystal structure of RQA_V phosphopeptide bound to HLA-A2
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Mohammed, F, Stones, D.H, Willcox, B.E.
登録日2013-11-19
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status.
Oncotarget, 8, 2017
6UBR
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Crystal structure of D678A GoxA bound to glycine at pH 7.5
分子名称: DI(HYDROXYETHYL)ETHER, GLYCINE, MAGNESIUM ION, ...
著者Yukl, E.T, Avalos, D.
登録日2019-09-12
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Kinetic and structural evidence that Asp-678 plays multiple roles in catalysis by the quinoprotein glycine oxidase.
J.Biol.Chem., 294, 2019
4NP7
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Structure of phosphotriesterase mutant (S308L/Y309A) from Agrobacterium radiobacter with diethyl thiophosphate bound in the active site
分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, FE (II) ION, ...
著者Jackson, C.J, Carr, P.D, Sugrue, E.
登録日2013-11-20
公開日2014-09-24
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献A 5000-fold increase in the specificity of a bacterial phosphotriesterase for malathion through combinatorial active site mutagenesis
Plos One, 9, 2014
6E55
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1.57 Angstroem Crystal Structure of FeoA from Klebsiella pneumoniae
分子名称: FeoA protein
著者Linkous, R.O, Sestok, A.E, Smith, A.T.
登録日2018-07-19
公開日2019-06-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献The crystal structure of Klebsiella pneumoniae FeoA reveals a site for protein-protein interactions.
Proteins, 87, 2019
2PGN
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The crystal structure of FAD and ThDP-dependent Cyclohexane-1,2-dione Hydrolase in Complex with Cyclohexane-1,2-dione
分子名称: CYCLOHEXANE-1,2-DIONE, Cyclohexane-1,2-dione Hydrolase (Cdh), FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Fraas, S, Warkentin, E, Ermler, U.
登録日2007-04-10
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The crystal structure of FAD and ThDP-dependent Cyclohexane-1,2-dione Hydrolase in Complex with Cyclohexane-1,2-dione
To be Published
2PK5
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Crystal Structure of HIV-1 Protease (Q7K, L33I, L63I ) in Complex with KNI-10075
分子名称: (4R)-N-[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-3-(methyl sulfonyl)-L-alanyl}amino)-4-phenylbutanoyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide, GLYCEROL, Protease
著者Armstrong, A.A, Lafont, V, Kiso, Y, Freire, E, Amzel, L.M.
登録日2007-04-17
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Compensating enthalpic and entropic changes hinder binding affinity optimization.
Chem.Biol.Drug Des., 69, 2007
4NT6
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HLA-C*0801 Crystal Structure
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, Cw-8 alpha chain, ...
著者Liu, J.X, Toh, X.Y, Ren, E.C.
登録日2013-12-01
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献The immunodominant influenza A virus M158-66 cytotoxic T lymphocyte epitope exhibits degenerate class I major histocompatibility complex restriction in humans.
J.Virol., 88, 2014

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