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PDB: 40736 件

6OXP
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HIV-1 Protease NL4-3 WT in Complex with UMass3
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-({[4-(hydroxymethyl)phenyl]sulfonyl}[(2S)-2-methylbutyl]amino)propyl]carbamate, Protease NL4-3, SULFATE ION
著者Lockbaum, G.J, Rusere, L.N, Lee, S.K, Henes, M, Kosovrasti, K, Spielvogel, E, Nalivaika, E.A, Swanstrom, R, KurtYilmaz, N, Schiffer, C.A, Ali, A.
登録日2019-05-14
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献HIV-1 Protease Inhibitors Incorporating Stereochemically Defined P2' Ligands To Optimize Hydrogen Bonding in the Substrate Envelope.
J.Med.Chem., 62, 2019
6OXS
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HIV-1 Protease NL4-3 WT in Complex with LR-76
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-3-hydroxy-4-[({4-[(1R)-1-hydroxyethyl]phenyl}sulfonyl)(2-methylpropyl)amino]-1-phenylbutan-2-yl}carbamate, Protease NL4-3
著者Lockbaum, G.J, Rusere, L.N, Lee, S.K, Henes, M, Kosovrasti, K, Spielvogel, E, Nalivaika, E.A, Swanstrom, R, KurtYilmaz, N, Schiffer, C.A, Ali, A.
登録日2019-05-14
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.989 Å)
主引用文献HIV-1 Protease Inhibitors Incorporating Stereochemically Defined P2' Ligands To Optimize Hydrogen Bonding in the Substrate Envelope.
J.Med.Chem., 62, 2019
6WR1
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Human steroidogenic cytochrome P450 17A1 mutant N52Y with inhibitor abiraterone
分子名称: Abiraterone, PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase
著者Petrunak, E.M, Bart, A.G, Scott, E.E.
登録日2020-04-29
公開日2021-05-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Human cytochrome P450 17A1 structures with metabolites of prostate cancer drug abiraterone reveal substrate-binding plasticity and a second binding site.
J.Biol.Chem., 299, 2023
5L8M
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Wild-type PAS-GAF fragment from Deinococcus radiodurans Bphp collected at LCLS
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, ACETATE ION, Bacteriophytochrome
著者Claesson, E, Takala, H, Edlund, P, Henry, L, Dods, R, Schmidt, M, Westenhoff, S.
登録日2016-06-08
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography.
Sci Rep, 6, 2016
6O5Y
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Structure of Human Cytochrome P450 1A1 with 5-amino-N-(5-((4R,5R)-4-amino-5-fluoroazepan-1-yl)-1-methyl-1H-pyrazol-4-yl)-2-(2,6-difluorophenyl)thiazole-4-carboxamide)
分子名称: 5-amino-N-{5-[(4R,5R)-4-amino-5-fluoroazepan-1-yl]-1-methyl-1H-pyrazol-4-yl}-2-(2,6-difluorophenyl)-1,3-thiazole-4-carboxamide, Cytochrome P450 1A1, NITRATE ION, ...
著者Bart, A.G, Scott, E.E.
登録日2019-03-04
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Human Cytochrome P450 1A1 Adapts Active Site for Atypical Nonplanar Substrate.
Drug Metab.Dispos., 48, 2020
6WR0
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Human steroidogenic cytochrome P450 17A1 with 3-keto-delta4-abiraterone analog
分子名称: (8alpha)-17-(pyridin-3-yl)androsta-4,16-dien-3-one, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Petrunak, E.M, Bart, A.G, Scott, E.E.
登録日2020-04-29
公開日2021-05-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Human cytochrome P450 17A1 structures with metabolites of prostate cancer drug abiraterone reveal substrate-binding plasticity and a second binding site.
J.Biol.Chem., 299, 2023
6U8J
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Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, UNKNOWN ATOM OR ION
著者Michalska, K, Evdokimova, E, Semper, C, Di Leo, R, Stogios, P.J, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-09-05
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.492 Å)
主引用文献Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
To Be Published
5IFS
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BU of 5ifs by Molmil
Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
著者Roske, Y, Arumughan, A, Heinemann, U, Wanker, E.
登録日2016-02-26
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Quantitative interaction mapping reveals an extended UBX domain in ASPL that disrupts functional p97 hexamers.
Nat Commun, 7, 2016
6U08
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Double-stranded DNA-specific cytidine deaminase type VI secretion system effector and cognate immunity complex from Burkholderia cenocepacia
分子名称: DddI, Double-stranded DNA-specific cytidine deaminase, ZINC ION
著者Bosch, D.E, de Moraes, M.M.H, Mougous, J.D.
登録日2019-08-13
公開日2020-07-15
最終更新日2020-08-05
実験手法X-RAY DIFFRACTION (2.491 Å)
主引用文献A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing.
Nature, 583, 2020
6OJR
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Crystal structure of Sphingomonas paucimobilis TMY1009 apo-LsdA
分子名称: GLYCEROL, Lignostilbene-alpha,beta-dioxygenase isozyme I, MAGNESIUM ION
著者Kuatsjah, E, Verstraete, M.M, Kobylarz, M.J, Liu, A.K.N, Murphy, M.E.P, Eltis, L.D.
登録日2019-04-12
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of functionally important residues and structural features in a bacterial lignostilbene dioxygenase.
J.Biol.Chem., 294, 2019
6WW0
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Human steroidogenic cytochrome P450 17A1 with 3-keto-5alpha-abiraterone analog
分子名称: (5alpha,8alpha)-17-(pyridin-3-yl)androst-16-en-3-one, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Petrunak, E.M, Bart, A.G, Scott, E.E.
登録日2020-05-07
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Human cytochrome P450 17A1 structures with metabolites of prostate cancer drug abiraterone reveal substrate-binding plasticity and a second binding site.
J.Biol.Chem., 299, 2023
6OCR
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BU of 6ocr by Molmil
Crystal structure of human KCTD16 T1 domain
分子名称: BTB/POZ domain-containing protein KCTD16
著者Zuo, H, Glaaser, I, Zhao, Y, Kurinov, I, Mosyak, L, Wang, H, Liu, J, Park, J, Frangaj, A, Sturchler, E, Zhou, M, McDonald, P, Geng, Y, Slesinger, P.A, Fan, Q.R.
登録日2019-03-25
公開日2019-04-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural basis for auxiliary subunit KCTD16 regulation of the GABABreceptor.
Proc.Natl.Acad.Sci.USA, 116, 2019
7NEU
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Inhibitor Complex with Thrombin Activatable Fibrinolysis Inhibitor (TAFIa)
分子名称: (1R,3S)-3-(4-ammoniobutyl)-1-(4-fluoro-2-(1-methyl-1H-imidazol-5-yl)benzyl)-1,4-azaphosphinan-1-ium-3-carboxylate 4,4-dioxide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Brown, D.G, Schaffner, A.P, Vuillard, L.M, Gloanec, P, Raimbauld, E.
登録日2021-02-04
公開日2021-04-07
最終更新日2021-04-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phosphinanes and Azaphosphinanes as Potent and Selective Inhibitors of Activated Thrombin-Activatable Fibrinolysis Inhibitor (TAFIa).
J.Med.Chem., 64, 2021
8DNR
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Prefusion-stabilized Hendra virus fusion protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
著者Byrne, P.O, Blade, E.G, McLellan, J.S.
登録日2022-07-11
公開日2023-07-19
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Prefusion stabilization of the Hendra and Langya virus F proteins.
J.Virol., 98, 2024
7A18
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50S Deinococcus radiodurans ribosome bounded with mycinamicin IV
分子名称: 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, ...
著者Breiner, E, Eyal, Z, Matzov, D, Halfon, Y, Cimicata, G, Rozenberg, H, Zimmerman, E, Bashan, A, Yonath, A.
登録日2020-08-12
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Ribosome-binding and anti-microbial studies of the mycinamicins, 16-membered macrolide antibiotics from Micromonospora griseorubida.
Nucleic Acids Res., 49, 2021
8DO4
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Prefusion-stabilized Nipah virus fusion protein, dimer of trimers
分子名称: Fusion glycoprotein F0
著者Byrne, P.O, Blade, E.G, McLellan, J.S.
登録日2022-07-12
公開日2023-07-19
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Prefusion stabilization of the Hendra and Langya virus F proteins.
J.Virol., 98, 2024
6M7X
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BU of 6m7x by Molmil
Structure of human CYP11B1 in complex with fadrozole
分子名称: 4-[(5S)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-5-yl]benzonitrile, Cytochrome P450 11B1, mitochondrial, ...
著者Scott, E.E, Brixius-Anderko, S.
登録日2018-08-21
公開日2018-11-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献Structure of human cortisol-producing cytochrome P450 11B1 bound to the breast cancer drug fadrozole provides insights for drug design.
J. Biol. Chem., 294, 2019
5IDR
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Crystal structure of Proteus Mirabilis ScsC in a transitional conformation
分子名称: DsbA-like protein
著者Furlong, E.J, Kurth, F, Choudhury, H.G, Martin, J.L.
登録日2016-02-24
公開日2017-08-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.562 Å)
主引用文献A shape-shifting redox foldase contributes to Proteus mirabilis copper resistance.
Nat Commun, 8, 2017
4XA9
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Crystal structure of the complex between the N-terminal domain of RavJ and LegL1 from Legionella pneumophila str. Philadelphia
分子名称: Gala protein type 1, 3 or 4, Uncharacterized protein
著者Stogios, P.J, Cuff, M.E, Nocek, B, Evdokimova, E, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-12-13
公開日2015-01-28
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol. Syst. Biol., 12, 2016
8DRI
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Structure of Rv0455c from Mycobacterium tuberculosis
分子名称: Conserved protein
著者Kent, J.E, Aleshin, A.E, Marassi, F.M.
登録日2022-07-20
公開日2023-08-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of RV0455c from Mycobacterium tuberculosis
To Be Published
6MAM
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Cleaved Ebola GP in complex with a broadly neutralizing human antibody, ADI-15946
分子名称: ADI-15946 Fab Heavy Chain, ADI-15946 Fab Light Chain, Envelope glycoprotein, ...
著者West, B.R, Moyer, C.L, Fusco, M.L, Saphire, E.O.
登録日2018-08-28
公開日2019-03-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Structural basis of broad ebolavirus neutralization by a human survivor antibody.
Nat. Struct. Mol. Biol., 26, 2019
8DZD
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Structure of MS3494 from Mycobacterium smegmatis bound to sucrose
分子名称: ACETATE ION, MS3494, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Kent, J.E, Aleshin, A.E, Marassi, F.M.
登録日2022-08-06
公開日2023-08-09
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structure of MS3494 from Mycobacterium smegmatis bound to sucrose
To Be Published
8G63
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Ralimetinib (LY2228820) in complex with wild type EGFR
分子名称: Epidermal growth factor receptor, ralimetinib
著者Chitnis, S.P, Heppner, D.E.
登録日2023-02-14
公開日2023-10-11
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Inhibition of a lower potency target drives the anticancer activity of a clinical p38 inhibitor.
Cell Chem Biol, 30, 2023
8G83
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Structure of NAD+ consuming protein Acinetobacter baumannii TIR domain
分子名称: NAD(+) hydrolase AbTIR
著者Klontz, E.H, Wang, Y, Glendening, G, Carr, J, Tsibouris, T, Buddula, S, Nallar, S, Soares, A, Snyder, G.A.
登録日2023-02-17
公開日2023-10-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献The structure of NAD + consuming protein Acinetobacter baumannii TIR domain shows unique kinetics and conformations.
J.Biol.Chem., 299, 2023
6OFF
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High-resolution filamentous structures of in vitro polymerized PrgI needle
分子名称: Protein PrgI
著者Guo, E.Z, Galan, J.E.
登録日2019-03-29
公開日2019-07-10
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A polymorphic helix of a Salmonella needle protein relays signals defining distinct steps in type III secretion.
Plos Biol., 17, 2019

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