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PDB: 82 件

8GH2
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Structure of Trypanosoma (MDH)4-(Pex5)2, close conformation
分子名称: Peroxisome targeting signal 1 receptor, malate dehydrogenase
著者Sonani, R.R, Artur, B, Jemiola-Rzeminska, M, Lipinski, O, Patel, S.N, Sood, T, Dubin, G.
登録日2023-03-09
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Structure of Trypanosoma (MDH)4-(Pex5)2, close conformation
To Be Published
8GI0
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BU of 8gi0 by Molmil
Structure of Trypanosoma docking complex
分子名称: Peroxisomal membrane protein PEX14, Peroxisome targeting signal 1 receptor, malate dehydrogenase
著者Sonani, R.R, Artur, B, Jemiola-Rzeminska, M, Lipinski, O, Patel, S.N, Sood, T, Dubin, G.
登録日2023-03-13
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of Trypanosoma docking complex
To Be Published
8GGH
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BU of 8ggh by Molmil
Structure of Trypanosoma (MDH)4-PEX5, distal conformation
分子名称: Peroxisome targeting signal 1 receptor, malate dehydrogenase
著者Sonani, R.R, Artur, B, Jemiola-Rzeminska, M, Lipinski, O, Patel, S.N, Sood, T, Dubin, G.
登録日2023-03-08
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Structure of Trypanosoma (MDH)4-PEX5, distal conformation
To Be Published
8GGD
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Structure of Trypanosoma (MDH)4-Pex5, close conformation
分子名称: Peroxisome targeting signal 1 receptor, malate dehydrogenase
著者Sonani, R.R, Artur, B, Jemiola-Rzeminska, M, Lipinski, O, Patel, S.N, Sood, T, Dubin, G.
登録日2023-03-08
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structure of Trypanosoma (MDH)4-Pex5, close conformation
To Be Published
7Z35
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BU of 7z35 by Molmil
Crystal structure of PEX13 SH3 domain of Trypanosoma cruzi
分子名称: Putative peroxin 13
著者Sonani, R.R, Dubin, G.
登録日2022-03-01
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of PEX13 SH3 domain of Trypanosoma cruzi
To Be Published
5C3T
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BU of 5c3t by Molmil
PD-1 binding domain from human PD-L1
分子名称: Programmed cell death 1 ligand 1
著者Zak, K.M, Dubin, G, Holak, T.A.
登録日2015-06-17
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the Complex of Human Programmed Death 1, PD-1, and Its Ligand PD-L1.
Structure, 23, 2015
5EPW
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BU of 5epw by Molmil
C-Terminal Domain Of Human Coronavirus Nl63 Nucleocapsid Protein
分子名称: Nucleoprotein
著者Szelazek, B, Kabala, W, Kus, K, Zdzalik, M, Golik, P, Florek, D, Burmistrz, M, Pyrc, K, Dubin, G.
登録日2015-11-12
公開日2017-02-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Characterization of Human Coronavirus NL63 N Protein.
J. Virol., 91, 2017
4GR6
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BU of 4gr6 by Molmil
Crystal structure of AtRbcX2 from Arabidopsis thaliana
分子名称: 1,2-ETHANEDIOL, AtRbcX2
著者Grudnik, P, Golik, P, Kolesinski, P, Dubin, G, Szczepaniak, A.
登録日2012-08-24
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into eukaryotic Rubisco assembly - Crystal structures of RbcX chaperones from Arabidopsis thaliana.
Biochim.Biophys.Acta, 1830, 2013
4GR2
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Structure of AtRbcX1 from Arabidopsis thaliana.
分子名称: AtRbcX1
著者Golik, P, Grudnik, P, Kolesinski, P, Dubin, G, Szczepaniak, A.
登録日2012-08-24
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into eukaryotic Rubisco assembly - Crystal structures of RbcX chaperones from Arabidopsis thaliana.
Biochim.Biophys.Acta, 1830, 2013
6SF7
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BU of 6sf7 by Molmil
Atomic resolution structure of SplF protease from Staphylococcus aureus
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
著者Golik, P, Stach, N, Karim, A, Dubin, G.
登録日2019-08-01
公開日2021-03-03
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Determinants of Substrate Specificity of SplF Protease from Staphylococcus aureus .
Int J Mol Sci, 22, 2021
7NRZ
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BU of 7nrz by Molmil
Crystal structure of malate dehydrogenase from Trypanosoma cruzi
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Sonani, R.R, Kurpiewska, K, Lewinski, K, Dubin, G.
登録日2021-03-04
公開日2022-02-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Distinct sequence and structural feature of trypanosoma malate dehydrogenase.
Biochem.Biophys.Res.Commun., 557, 2021
7OUN
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BU of 7oun by Molmil
Structure of human PD-L1 in complex with macrocyclic inhibitor
分子名称: Programmed cell death 1 ligand 1, macrocyclic peptide
著者Zyla, E, Dubin, G.
登録日2021-06-12
公開日2021-09-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Characterization of a Macrocyclic Peptide Modulator of the PD-1/PD-L1 Immune Checkpoint Axis.
Molecules, 26, 2021
6SPT
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BU of 6spt by Molmil
High resolution crystal structure of N-terminal domain of PEX14 from Trypanosoma brucei in complex with the fist compound with sub-micromolar trypanocidal activity
分子名称: 5-[(4-methoxynaphthalen-1-yl)methyl]-1-[2-[(2-methyl-1-oxidanyl-propan-2-yl)amino]ethyl]-~{N}-(naphthalen-1-ylmethyl)-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridine-3-carboxamide, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
著者Napolitano, V, Dawidowski, M, Kalel, V.C, Fino, R, Emmanouilidis, L, Lenhart, D, Ostertag, M, Kaiser, M, Kolonko, M, Schilebs, W, Maser, P, Tetko, I, Hadian, K, Plettenburg, O, Erdmann, R, Sattler, M, Popowicz, G.M, Dubin, G.
登録日2019-09-02
公開日2020-01-01
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure-Activity Relationship in Pyrazolo[4,3-c]pyridines, First Inhibitors of PEX14-PEX5 Protein-Protein Interaction with Trypanocidal Activity.
J.Med.Chem., 63, 2020
7Q86
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BU of 7q86 by Molmil
Crystal structure of human peroxisomal acyl-Co-A oxidase 1a, FAD-bound-form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Isoform 2 of Peroxisomal acyl-coenzyme A oxidase 1
著者Sonani, R.R, Blat, A, Dubin, G.
登録日2021-11-10
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structures of apo- and FAD-bound human peroxisomal acyl-CoA oxidase provide mechanistic basis explaining clinical observations.
Int.J.Biol.Macromol., 205, 2022
7Q84
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Crystal structure of human peroxisomal acyl-Co-A oxidase 1a, apo-form
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Sonani, R.R, Blat, A, Dubin, G.
登録日2021-11-10
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of apo- and FAD-bound human peroxisomal acyl-CoA oxidase provide mechanistic basis explaining clinical observations.
Int.J.Biol.Macromol., 205, 2022
7QRC
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BU of 7qrc by Molmil
X-ray structure of Trypanosoma cruzi PEX14 in complex with a PEX5-PEX14 PPI inhibitor
分子名称: GLYCEROL, Peroxin-14, ~{N}-(5-ethyl-6-oxidanylidene-benzo[b][1,4]benzothiazepin-2-yl)-2-(4-fluorophenyl)ethanamide
著者Napolitano, V, Popowicz, G.M, Dawidowski, M, Dubin, G.
登録日2022-01-10
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure-based design, synthesis and evaluation of a novel family of PEX5-PEX14 interaction inhibitors against Trypanosoma.
Eur.J.Med.Chem., 243, 2022
7QOZ
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BU of 7qoz by Molmil
Crystal structure of NAD-bound glycosomal malate dehydrogenase from Trypanosoma cruzi
分子名称: GLYCEROL, Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Sonani, R.R, Dubin, G.
登録日2021-12-30
公開日2023-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of NAD-bound glycosomal malate dehydrogenase from Trypanosoma cruzi
To Be Published
7Z1G
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BU of 7z1g by Molmil
Crystal structure of nonphosphorylated (Tyr216) GSK3b in complex with CX-4945
分子名称: 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid, Glycogen synthase kinase-3 beta, IMIDAZOLE, ...
著者Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
登録日2022-02-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of nonphosphorylated (Tyr216) GSK3b kinase in complex with CX-4945
To Be Published
7Z1F
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BU of 7z1f by Molmil
Crystal structure of GSK3b in complex with CX-4945
分子名称: 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid, Glycogen synthase kinase-3 beta, IMIDAZOLE, ...
著者Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
登録日2022-02-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of phosphorylated (Tyr216) GSK3b kinase in complex with CX-4945
To Be Published
7Z5N
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BU of 7z5n by Molmil
Crystal structure of DYRK1A in complex with CX-4945
分子名称: 1,2-ETHANEDIOL, 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid, DI(HYDROXYETHYL)ETHER, ...
著者Pustelny, K, Grygier, P, Golik, P, Dubin, G, Czarna, A.
登録日2022-03-09
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Crystal structure DYRK1A in complex with CX-4945
To Be Published
8C3G
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Crystal structure of DYRK1A in complex with AZ191
分子名称: 1,2-ETHANEDIOL, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, N-[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]-4-(1-methylpyrrolo[2,3-c]pyridin-3-yl)pyrimidin-2-amine, ...
著者Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
登録日2022-12-23
公開日2024-01-10
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural perspective on the design of selective DYRK1B inhibitors
To Be Published
8C3Q
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Crystal structure of DYRK1A in complex with rutin
分子名称: Dual specificity tyrosine-phosphorylation-regulated kinase 1A, RUTIN
著者Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
登録日2022-12-28
公開日2024-01-10
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal structure of DYRK1A in complex with rutin
To Be Published
8C3R
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Crystal structure of DYRK1A in complex with gossypin
分子名称: ACETATE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, Gossypin
著者Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
登録日2022-12-28
公開日2024-01-10
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structure of DYRK1A in complex with gossypin
To Be Published
8C2Z
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Crystal structure of DYRK1B in complex with AZ191
分子名称: Dual specificity tyrosine-phosphorylation-regulated kinase 1B, MANGANESE (II) ION, N-[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]-4-(1-methylpyrrolo[2,3-c]pyridin-3-yl)pyrimidin-2-amine
著者Grygier, P, Pustelny, K, Dubin, G, Czarna, A.
登録日2022-12-23
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural perspective on the design of selective DYRK1B inhibitors
To Be Published
7R2V
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Structure of nsp14 from SARS-CoV-2 in complex with SAH
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Proofreading exoribonuclease nsp14, ...
著者Czarna, A, Plewka, J, Kresik, L, Matsuda, A, Abdulkarim, K, Robinson, C, OByrne, S, Cunningham, F, Georgiou, I, Pachota, M, Popowicz, G.M, Wyatt, P.G, Dubin, G, Pyrc, K.
登録日2022-02-06
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Refolding of lid subdomain of SARS-CoV-2 nsp14 upon nsp10 interaction releases exonuclease activity.
Structure, 30, 2022

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件を2024-08-07に公開中

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