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PDB: 108 results

8BJ9
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X-ray structure of the CeuE Homologue from Parageobacillus thermoglucosidasius - 5LICAM complex.
Descriptor: ABC transporter, FE (III) ION, N,N'-pentane-1,5-diylbis(2,3-dihydroxybenzamide), ...
Authors:Blagova, E.V, Bennett, M, Booth, R, Dodson, E.J, Duhme-KLair, A.-K, Wilson, K.S.
Deposit date:2022-11-03
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.069 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
8BNW
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X-ray structure of the CeuE Homologue from Parageobacillus thermoglucosidasius - apo form
Descriptor: ABC transporter, NICKEL (II) ION, SULFATE ION
Authors:Blagova, E.V, Bennett, M, Booth, R, Dodson, E.J, Duhme-KLair, A.-K, Wilson, K.S.
Deposit date:2022-11-14
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.133 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
3K3W
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Thermostable Penicillin G acylase from Alcaligenes faecalis in orthorhombic form
Descriptor: CALCIUM ION, Penicillin G acylase
Authors:Varshney, N.K, Kumar, R.S, Ignatova, Z, Dodson, E, Suresh, C.G.
Deposit date:2009-10-05
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Crystallization and X-ray structure analysis of a thermostable penicillin G acylase from Alcaligenes faecalis.
Acta Crystallogr.,Sect.F, 68, 2012
2BO8
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DISSECTION OF MANNOSYLGLYCERATE SYNTHASE: AN ARCHETYPAL MANNOSYLTRANSFERASE
Descriptor: CHLORIDE ION, GUANOSINE 5'-(TRIHYDROGEN DIPHOSPHATE), P'-D-MANNOPYRANOSYL ESTER, ...
Authors:Flint, J, Taylor, E, Yang, M, Bolam, D.N, Tailford, L.E, Martinez-Fleites, C, Dodson, E.J, Davis, B.G, Gilbert, H.J, Davies, G.J.
Deposit date:2005-04-08
Release date:2005-06-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural dissection and high-throughput screening of mannosylglycerate synthase.
Nat. Struct. Mol. Biol., 12, 2005
2BO7
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DISSECTION OF MANNOSYLGLYCERATE SYNTHASE: AN ARCHETYPAL MANNOSYLTRANSFERASE
Descriptor: COBALT (II) ION, GUANOSINE-5'-DIPHOSPHATE, MANNOSYLGLYCERATE SYNTHASE
Authors:Flint, J, Taylor, E, Yang, M, Bolam, D.N, Tailford, L.E, Martinez-Fleites, C, Dodson, E.J, Davis, B.G, Gilbert, H.J, Davies, G.J.
Deposit date:2005-04-08
Release date:2005-06-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural dissection and high-throughput screening of mannosylglycerate synthase.
Nat. Struct. Mol. Biol., 12, 2005
2BO4
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Dissection of mannosylglycerate synthase: an archetypal mannosyltransferase
Descriptor: CITRATE ANION, MANNOSYLGLYCERATE SYNTHASE
Authors:Flint, J, Taylor, E, Yang, M, Bolam, D.N, Tailford, L.E, Martinez-Fleites, C, Dodson, E.J, Davis, B.G, Gilbert, H.J, Davies, G.J.
Deposit date:2005-04-07
Release date:2005-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Dissection and High-Throughput Screening of Mannosylglyceerate Synthase
Nat.Struct.Mol.Biol., 12, 2005
2C3F
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The structure of a group A streptococcal phage-encoded tail-fibre showing hyaluronan lyase activity.
Descriptor: HYALURONIDASE, PHAGE ASSOCIATED, SODIUM ION
Authors:Taylor, E.J, Smith, N.L, Linsay, A.-M, Charnock, S.J, Turkenburg, J.P, Dodson, E.J, Davies, G.J, Black, G.W.
Deposit date:2005-10-06
Release date:2005-11-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of a Group a Streptococcal Phage-Encoded Virulence Factor Reveals Catalytically Active Triple-Stranded Beta-Helix
Proc.Natl.Acad.Sci.USA, 102, 2005
2BO6
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DISSECTION OF MANNOSYLGLYCERATE SYNTHASE: AN ARCHETYPAL MANNOSYLTRANSFERASE
Descriptor: (2R)-2,3-DIHYDROXYPROPANOIC ACID, MANGANESE (II) ION, MANNOSYLGLYCERATE SYNTHASE
Authors:Flint, J, Taylor, E, Yang, M, Bolam, D.N, Tailford, L.E, Martinez-Fleites, C, Dodson, E.J, Davis, B.G, Gilbert, H.J, Davies, G.J.
Deposit date:2005-04-08
Release date:2005-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Dissection and High-Throughput Screening of Mannosylglyceerate Synthase
Nat.Struct.Mol.Biol., 12, 2005
2BSX
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Crystal structure of the Plasmodium falciparum purine nucleoside phosphorylase complexed with inosine
Descriptor: INOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE
Authors:Schnick, C, Brzozowski, A.M, Dodson, E.J, Murshudov, G.N, Brannigan, J.A, Wilkinson, A.J.
Deposit date:2005-05-24
Release date:2005-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Plasmodium Falciparum Purine Nucleoside Phosphorylase Complexed with Sulfate and its Natural Substrate Inosine
Acta Crystallogr.,Sect.D, 61, 2005
3D55
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Crystal structure of M. tuberculosis YefM antitoxin
Descriptor: SULFATE ION, Uncharacterized protein Rv3357/MT3465
Authors:Kumar, P, Issac, B, Dodson, E.J, Turkenberg, J.P, Mande, S.C.
Deposit date:2008-05-15
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that it is not an intrinsically unstructured protein
J.Mol.Biol., 383, 2008
3MIW
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BU of 3miw by Molmil
Crystal Structure of Rotavirus NSP4
Descriptor: 1,2-ETHANEDIOL, Non-structural glycoprotein 4
Authors:Chacko, A.R, Read, R.J, Dodson, E.J, Rao, D.C, Suguna, K.
Deposit date:2010-04-12
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A new pentameric structure of rotavirus NSP4 revealed by molecular replacement.
Acta Crystallogr.,Sect.D, 68, 2012
3CTO
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BU of 3cto by Molmil
Crystal Structure of M. tuberculosis YefM antitoxin
Descriptor: SULFATE ION, Uncharacterized protein Rv3357/MT3465
Authors:Kumar, P, Issac, B, Dodson, E.J, Turkenberg, J.P, Mande, S.C.
Deposit date:2008-04-14
Release date:2008-12-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that it is not an intrinsically unstructured protein
J.Mol.Biol., 383, 2008
1LDN
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STRUCTURE OF A TERNARY COMPLEX OF AN ALLOSTERIC LACTATE DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS AT 2.5 ANGSTROMS RESOLUTION
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, L-LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Wigley, D.B, Gamblin, S.J, Turkenburg, J.P, Dodson, E.J, Piontek, K, Muirhead, H, Holbrook, J.J.
Deposit date:1991-11-19
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a ternary complex of an allosteric lactate dehydrogenase from Bacillus stearothermophilus at 2.5 A resolution.
J.Mol.Biol., 223, 1992
3ML0
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BU of 3ml0 by Molmil
Thermostable Penicillin G acylase from Alcaligenes faecalis in tetragonal form
Descriptor: CALCIUM ION, Penicillin G acylase, alpha subunit, ...
Authors:Varshney, N.K, Kumar, R.S, Ignatova, Z, Dodson, E, Suresh, C.G.
Deposit date:2010-04-16
Release date:2010-05-05
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystallization and X-ray structure analysis of a thermostable penicillin G acylase from Alcaligenes faecalis.
Acta Crystallogr.,Sect.F, 68, 2012
3QQ6
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The N-terminal DNA binding domain of SinR from Bacillus subtilis
Descriptor: HTH-type transcriptional regulator sinR
Authors:Colledge, V, Fogg, M.J, Levdikov, V.M, Dodson, E.J, Wilkinson, A.J.
Deposit date:2011-02-15
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Organisation of SinR, the Master Regulator of Biofilm Formation in Bacillus subtilis.
J.Mol.Biol., 411, 2011
2JES
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BU of 2jes by Molmil
Portal protein (gp6) from bacteriophage SPP1
Descriptor: CALCIUM ION, MERCURY (II) ION, PORTAL PROTEIN, ...
Authors:Lebedev, A.A, Krause, M.H, Isidro, A.L, Vagin, A.A, Orlova, E.V, Turner, J, Dodson, E.J, Tavares, P, Antson, A.A.
Deposit date:2007-01-21
Release date:2007-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Framework for DNA Translocation Via the Viral Portal Protein
Embo J., 26, 2007
1VYQ
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Novel inhibitors of Plasmodium Falciparum dUTPase provide a platform for anti-malarial drug design
Descriptor: 2,3-DEOXY-3-FLUORO-5-O-TRITYLURIDINE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
Authors:Whittingham, J.L, Leal, I, Kasinathan, G, Nguyen, C, Bell, E, Jones, A.F, Berry, C, Benito, A, Turkenburg, J.P, Dodson, E.J, Ruiz Perez, L.M, Wilkinson, A.J, Johansson, N.G, Brun, R, Gilbert, I.H, Gonzalez Pacanowska, D, Wilson, K.S.
Deposit date:2004-05-05
Release date:2005-05-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dutpase as a Platform for Antimalarial Drug Design: Structural Basis for the Selectivity of a Class of Nucleoside Inhibitors.
Structure, 13, 2005
1I7O
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CRYSTAL STRUCTURE OF HPCE
Descriptor: 4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL ISOMERASE/DECARBOXYLASE, CALCIUM ION
Authors:Tame, J.R.H, Namba, K, Dodson, E.J, Roper, D.I.
Deposit date:2001-03-10
Release date:2001-03-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of HpcE, a multi-functional enzyme fold
To be Published
2HQS
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Crystal structure of TolB/Pal complex
Descriptor: ACETATE ION, GLYCEROL, Peptidoglycan-associated lipoprotein, ...
Authors:Grishkovskaya, I, Bonsor, D.A, Kleanthous, C, Dodson, E.J.
Deposit date:2006-07-19
Release date:2007-04-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular mimicry enables competitive recruitment by a natively disordered protein.
J.Am.Chem.Soc., 129, 2007
2IYA
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The crystal structure of macrolide glycosyltransferases: A blueprint for antibiotic engineering
Descriptor: (3S,5R,6S,7R,8R,11R,12S,13R,14S,15S)-6-HYDROXY-5,7,8,11,13,15-HEXAMETHYL-4,10-DIOXO-14-{[3,4,6-TRIDEOXY-3-(DIMETHYLAMINO)-BETA-D-XYLO-HEXOPYRANOSYL]OXY}-1,9-DIOXASPIRO[2.13]HEXADEC-12-YL 2,6-DIDEOXY-3-O-METHYL-ALPHA-L-ARABINO-HEXOPYRANOSIDE, OLEANDOMYCIN GLYCOSYLTRANSFERASE, URIDINE-5'-DIPHOSPHATE
Authors:Bolam, D.N, Roberts, S.M, Proctor, M.R, Turkenburg, J.P, Dodson, E.J, Martinez-Fleites, C, Yang, M, Davis, B.G, Davies, G.J, Gilbert, H.J.
Deposit date:2006-07-13
Release date:2007-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Two Macrolide Glycosyltransferases Provides a Blueprint for Host Cell Antibiotic Immunity.
Proc.Natl.Acad.Sci.USA, 104, 2007
2IYF
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The crystal structure of macrolide glycosyltransferases: A blueprint for antibiotic engineering
Descriptor: ERYTHROMYCIN A, MAGNESIUM ION, OLEANDOMYCIN GLYCOSYLTRANSFERASE, ...
Authors:Bolam, D.N, Roberts, S.M, Proctor, M.R, Turkenburg, J.P, Dodson, E.J, Martinez-Fleites, C, Yang, M, Davis, B.G, Davies, G.J, Gilbert, H.J.
Deposit date:2006-07-17
Release date:2007-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Two Macrolide Glycosyltransferases Provides a Blueprint for Host Cell Antibiotic Immunity.
Proc.Natl.Acad.Sci.USA, 104, 2007
1SFE
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BU of 1sfe by Molmil
ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI
Descriptor: ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE
Authors:Moore, M.H, Gulbis, J.M, Dodson, E.J, Demple, B, Moody, P.C.E.
Deposit date:1996-06-21
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a suicidal DNA repair protein: the Ada O6-methylguanine-DNA methyltransferase from E. coli.
EMBO J., 13, 1994
2YCB
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BU of 2ycb by Molmil
Structure of the archaeal beta-CASP protein with N-terminal KH domains from Methanothermobacter thermautotrophicus
Descriptor: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Silva, A.P.G, Chechik, M, Byrne, R.T, Waterman, D.G, Ng, C.L, Dodson, E.J, Koonin, E.V, Antson, A.A, Smits, C.
Deposit date:2011-03-13
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure and Activity of a Novel Archaeal Beta-Casp Protein with N-Terminal Kh Domains.
Structure, 19, 2011
2WV7
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Intracellular subtilisin precursor from B. clausii
Descriptor: INTRACELLULAR SUBTILISIN PROTEASE, SODIUM ION
Authors:Vevodova, J, Gamble, M, Ariza, A, Dodson, E, Jones, D.D, Wilson, K.S.
Deposit date:2009-10-15
Release date:2010-09-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of an Intracellular Subtilisin Reveals Novel Structural Features Unique to This Subtilisin Family.
Structure, 18, 2010
2XRM
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Processed Intracellular subtilisin from B. clausii
Descriptor: CALCIUM ION, INTRACELLULAR SUBTILISIN PROTEASE, PENTAETHYLENE GLYCOL, ...
Authors:Gamble, M, Kunze, G, Dodson, E.J, Jones, D.D, Wilson, K.S.
Deposit date:2010-09-20
Release date:2011-03-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Regulation of an Intracellular Subtilisin Protease Activity by a Short Propeptide Sequence Through an Original Combined Dual Mechanism.
Proc.Natl.Acad.Sci.USA, 108, 2011

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