Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 26 件
3R4F
DownloadVisualize
BU of 3r4f by Molmil
Prohead RNA
分子名称: MAGNESIUM ION, pRNA
著者Ding, F, Lu, C, Zhano, W, Rajashankar, K.R, Anderson, D.L, Jardine, P.J, Grimes, S, Ke, A.
登録日2011-03-17
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure and assembly of the essential RNA ring component of a viral DNA packaging motor.
Proc.Natl.Acad.Sci.USA, 108, 2011
7OCK
DownloadVisualize
BU of 7ock by Molmil
MAT in complex with SAMH
分子名称: S-adenosylmethionine synthase, SAM hydrolase
著者Simon, H, Kleiner, D, Shmulevich, F, Zarivach, R, Zalk, R, Tang, H, Ding, F, Bershtein, S.
登録日2021-04-27
公開日2021-07-21
最終更新日2021-10-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献SAMase of Bacteriophage T3 Inactivates Escherichia coli's Methionine S -Adenosyltransferase by Forming Heteropolymers.
Mbio, 12, 2021
5U0A
DownloadVisualize
BU of 5u0a by Molmil
CRISPR RNA-guided surveillance complex
分子名称: CRISPR-associated protein, Cas5e family, Cse1 family, ...
著者Xiao, Y, Luo, M, Hayes, R.P, Kim, J, Ng, S, Ding, F, Liao, M, Ke, A.
登録日2016-11-23
公開日2017-08-09
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System.
Cell, 170, 2017
5U07
DownloadVisualize
BU of 5u07 by Molmil
CRISPR RNA-guided surveillance complex
分子名称: CRISPR-associated protein, Cas5e family, Cse1 family, ...
著者Xiao, Y, Luo, M, Hayes, R.P, Kim, J, Ng, S, Ding, F, Liao, M, Ke, A.
登録日2016-11-23
公開日2017-08-09
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System.
Cell, 170, 2017
5H9E
DownloadVisualize
BU of 5h9e by Molmil
Crystal structure of E. coli Cascade bound to a PAM-containing dsDNA target (32-nt spacer) at 3.20 angstrom resolution.
分子名称: CRISPR system Cascade subunit CasA, CRISPR system Cascade subunit CasB, CRISPR system Cascade subunit CasC, ...
著者Hayes, R.P, Xiao, Y, Ding, F, van Erp, P.B.G, Rajashankar, K, Bailey, S, Wiedenheft, B, Ke, A.
登録日2015-12-28
公開日2016-02-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli.
Nature, 530, 2016
5H9F
DownloadVisualize
BU of 5h9f by Molmil
Crystal structure of E. coli Cascade bound to a PAM-containing dsDNA target at 2.45 angstrom resolution.
分子名称: CRISPR system Cascade subunit CasA, CRISPR system Cascade subunit CasB, CRISPR system Cascade subunit CasC, ...
著者Hayes, R.P, Xiao, Y, Ding, F, van Erp, P.B.G, Rajashankar, K, Bailey, S, Wiedenheft, B, Ke, A.
登録日2015-12-28
公開日2016-02-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli.
Nature, 530, 2016
1PJD
DownloadVisualize
BU of 1pjd by Molmil
Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers
分子名称: Pheromone alpha factor receptor
著者Valentine, K.G, Liu, S.-F, Marassi, F.M, Veglia, G, Nevzorov, A.A, Opella, S.J, Ding, F.-X, Wang, S.-H, Arshava, B, Becker, J.M, Naider, F.
登録日2003-06-02
公開日2003-09-16
最終更新日2024-05-22
実験手法SOLID-STATE NMR
主引用文献Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers
Biopolymers, 59, 2001
6JXM
DownloadVisualize
BU of 6jxm by Molmil
Crystal Structure of phi29 pRNA domain II
分子名称: BARIUM ION, MAGNESIUM ION, RNA (97-mer)
著者Cai, R, Price, I.R, Ding, F, Wu, F, Chen, T, Zhang, Y, Liu, G, Jardine, P.J, Lu, C, Ke, A.
登録日2019-04-24
公開日2019-08-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献ATP/ADP modulates gp16-pRNA conformational change in the Phi29 DNA packaging motor.
Nucleic Acids Res., 47, 2019
1SJF
DownloadVisualize
BU of 1sjf by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Cobalt Hexammine solution
分子名称: COBALT HEXAMMINE(III), Hepatitis Delta virus ribozyme, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A conformational switch controls hepatitis delta virus ribozyme catalysis.
Nature, 429, 2004
1SJ3
DownloadVisualize
BU of 1sj3 by Molmil
Hepatitis Delta Virus Gemonic Ribozyme Precursor, with Mg2+ Bound
分子名称: MAGNESIUM ION, precursor form of the Hepatitis Delta virus ribozyme, small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H, Doudna, J.A.
登録日2004-03-02
公開日2004-05-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
Nature, 429, 2004
1VBY
DownloadVisualize
BU of 1vby by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ bound
分子名称: Hepatitis Delta virus ribozyme, MANGANESE (II) ION, SODIUM ION, ...
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1VC0
DownloadVisualize
BU of 1vc0 by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solution
分子名称: Hepatitis Delta virus ribozyme, STRONTIUM ION, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1VBZ
DownloadVisualize
BU of 1vbz by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solution
分子名称: BARIUM ION, Hepatitis Delta virus ribozyme, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
3L7Z
DownloadVisualize
BU of 3l7z by Molmil
Crystal structure of the S. solfataricus archaeal exosome
分子名称: Probable exosome complex RNA-binding protein 1, Probable exosome complex exonuclease 1, Probable exosome complex exonuclease 2, ...
著者Lu, C, Ding, F, Ke, A.
登録日2009-12-29
公開日2010-06-23
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Crystal structure of the S. solfataricus archaeal exosome reveals conformational flexibility in the RNA-binding ring.
Plos One, 5, 2010
1VC6
DownloadVisualize
BU of 1vc6 by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Product with C75U Mutaion, cleaved in Imidazole and Mg2+ solutions
分子名称: Hepatitis Delta virus ribozyme, MAGNESIUM ION, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-04
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1VBX
DownloadVisualize
BU of 1vbx by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solution
分子名称: Hepatitis Delta virus ribozyme, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1VC5
DownloadVisualize
BU of 1vc5 by Molmil
Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution
分子名称: Hepatitis Delta virus ribozyme, SODIUM ION, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-04
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1SJ4
DownloadVisualize
BU of 1sj4 by Molmil
Crystal structure of a C75U mutant Hepatitis Delta Virus ribozyme precursor, in Cu2+ solution
分子名称: precursor form of the Hepatitis Delta virus ribozyme, small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H, Doudna, J.A.
登録日2004-03-02
公開日2004-05-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
Nature, 429, 2004
2OIH
DownloadVisualize
BU of 2oih by Molmil
Hepatitis Delta Virus gemonic ribozyme precursor with C75U mutation and bound to monovalent cation Tl+
分子名称: HDV ribozyme, THALLIUM (I) ION, U1 small nuclear ribonucleoprotein A
著者Ke, A, Ding, F, Batchelor, J.D, Doudna, J.A.
登録日2007-01-11
公開日2007-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural roles of monovalent cations in the HDV ribozyme.
Structure, 15, 2007
2OJ3
DownloadVisualize
BU of 2oj3 by Molmil
Hepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+)
分子名称: COBALT HEXAMMINE(III), HDV RIBOZYME, THALLIUM (I) ION, ...
著者Ke, A, Ding, F, Batchelor, J.D, Doudna, J.A.
登録日2007-01-12
公開日2007-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural roles of monovalent cations in the HDV ribozyme.
Structure, 15, 2007
2L87
DownloadVisualize
BU of 2l87 by Molmil
The 27-residue N-terminus CCR5-peptide in a ternary complex with HIV-1 gp120 and a CD4-mimic peptide
分子名称: C-C chemokine receptor type 5
著者Schnur, E, Noah, E, Ayzenshtat, I, Sargsyan, H, Inui, T, Ding, F.X, Arshava, B, Sagi, Y, Kessler, N, Levy, R, Scherf, T, Naider, F, Anglister, J.
登録日2011-01-06
公開日2011-07-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Conformation and Orientation of a 27-Residue CCR5 Peptide in a Ternary Complex with HIV-1 gp120 and a CD4-Mimic Peptide.
J.Mol.Biol., 410, 2011
4B2D
DownloadVisualize
BU of 4b2d by Molmil
human PKM2 with L-serine and FBP bound.
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, PYRUVATE KINASE ISOZYMES M1/M2, ...
著者Chaneton, B, Hillmann, P, Zheng, L, Martin, A.C.L, Maddocks, O.D.K, Chokkathukalam, A, Coyle, J.E, Jankevics, A, Holding, F.P, Vousden, K.H, Frezza, C, O'Reilly, M, Gottlieb, E.
登録日2012-07-13
公開日2012-10-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Serine is a natural ligand and allosteric activator of pyruvate kinase M2.
Nature, 491, 2012
2W99
DownloadVisualize
BU of 2w99 by Molmil
Crystal Structure of CDK4 in complex with a D-type cyclin
分子名称: CELL DIVISION PROTEIN KINASE 4, G1/S-SPECIFIC CYCLIN-D1
著者Day, P.J, Cleasby, A, Tickle, I.J, Reilly, M.O, Coyle, J.E, Holding, F.P, McMenamin, R.L, Yon, J, Chopra, R, Lengauer, C, Jhoti, H.
登録日2009-01-22
公開日2009-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Human Cdk4 in Complex with a D-Type Cyclin.
Proc.Natl.Acad.Sci.USA, 106, 2009
2W96
DownloadVisualize
BU of 2w96 by Molmil
Crystal Structure of CDK4 in complex with a D-type cyclin
分子名称: CELL DIVISION PROTEIN KINASE 4, G1/S-SPECIFIC CYCLIN-D1, GLYCEROL
著者Day, P.J, Cleasby, A, Tickle, I.J, Reilly, M.O, Coyle, J.E, Holding, F.P, McMenamin, R.L, Yon, J, Chopra, R, Lengauer, C, Jhoti, H.
登録日2009-01-21
公開日2009-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Human Cdk4 in Complex with a D-Type Cyclin.
Proc.Natl.Acad.Sci.USA, 106, 2009
2W9Z
DownloadVisualize
BU of 2w9z by Molmil
Crystal Structure of CDK4 in complex with a D-type cyclin
分子名称: CELL DIVISION PROTEIN KINASE 4, G1/S-SPECIFIC CYCLIN-D1
著者Day, P.J, Cleasby, A, Tickle, I.J, Reilly, M.O, Coyle, J.E, Holding, F.P, McMenamin, R.L, Yon, J, Chopra, R, Lengauer, C, Jhoti, H.
登録日2009-01-30
公開日2009-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of Human Cdk4 in Complex with a D-Type Cyclin.
Proc.Natl.Acad.Sci.USA, 106, 2009

 

12>

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon