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PDB: 159 results

5J43
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CdiA-CT from uropathogenic Escherichia coli in complex with CysK
Descriptor: Cysteine synthase A, tRNA nuclease CdiA
Authors:Morse, R.P, Goulding, C.W, Johnson, P.M.
Deposit date:2016-03-31
Release date:2016-07-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unraveling the essential role of CysK in CDI toxin activation.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
6CP8
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Contact-dependent growth inhibition toxin-immunity protein complex from from E. coli 3006
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CdiA, CdiI, ...
Authors:Michalska, K, Stols, L, Eschenfeldt, W, Hayes, C.S, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)
Deposit date:2018-03-13
Release date:2019-03-13
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Convergent Evolution of the Barnase/EndoU/Colicin/RelE (BECR) Fold in Antibacterial tRNase Toxins.
Structure, 27, 2019
8PQQ
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Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 E88Q Mutant bound to Clofarabine
Descriptor: 2-CHLORO-9-(2-DEOXY-2-FLUORO-B -D-ARABINOFURANOSYL)-9H-PURIN-6-AMINE, MAGNESIUM ION, Nucleoside 2-deoxyribosyltransferase
Authors:Tang, P, Harding, C.J, Czekster, M.C.
Deposit date:2023-07-11
Release date:2024-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
5HKQ
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Crystal structure of CDI complex from Escherichia coli STEC_O31
Descriptor: CdiI immunity protein, Contact-dependent inhibitor A
Authors:Michalska, K, Stols, L, Eschenfeldt, W, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2020-03-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional plasticity of antibacterial EndoU toxins.
Mol.Microbiol., 109, 2018
6CP9
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Contact-dependent growth inhibition toxin - immunity protein complex from Klebsiella pneumoniae 342
Descriptor: CdiA, CdiI
Authors:Michalska, K, Stols, L, Eschenfeldt, W, Hayes, C.S, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)
Deposit date:2018-03-13
Release date:2019-03-13
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Convergent Evolution of the Barnase/EndoU/Colicin/RelE (BECR) Fold in Antibacterial tRNase Toxins.
Structure, 27, 2019
8PZ0
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Intracellular leucine aminopeptidase of Pseudomonas aeruginosa PA14.
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, CHLORIDE ION, ...
Authors:Simpson, M.C, Czekster, C.M, Harding, C.J.
Deposit date:2023-07-26
Release date:2023-11-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unveiling the Catalytic Mechanism of a Processive Metalloaminopeptidase.
Biochemistry, 62, 2023
8PZM
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BU of 8pzm by Molmil
Intracellular leucine aminopeptidase of Pseudomonas aeruginosa PA14 bound to bestatin inhibitor and manganese
Descriptor: 1,2-ETHANEDIOL, 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, BICARBONATE ION, ...
Authors:Simpson, M.C, Czekster, C.M, Harding, C.J.
Deposit date:2023-07-27
Release date:2023-11-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Unveiling the Catalytic Mechanism of a Processive Metalloaminopeptidase.
Biochemistry, 62, 2023
8PZY
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Intracellular leucine aminopeptidase of Pseudomonas aeruginosa PA14 - hexameric assembly with manganese bound
Descriptor: 1,2-ETHANEDIOL, 2-[3-[3-(2-hydroxyethoxy)propoxy]propoxy]ethanol, AMMONIUM ION, ...
Authors:Simpson, M.C, Czekster, C.M, Harding, C.J.
Deposit date:2023-07-27
Release date:2023-11-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Unveiling the Catalytic Mechanism of a Processive Metalloaminopeptidase.
Biochemistry, 62, 2023
6TAB
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BU of 6tab by Molmil
Bd0314 DslA wild-type form 2
Descriptor: SLT domain-containing protein, SULFATE ION
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2019-10-29
Release date:2020-07-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus.
Nat Commun, 11, 2020
8PQR
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Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 WT bound to DAD_Immucillin-H
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, Nucleoside 2-deoxyribosyltransferase
Authors:Tang, P, Harding, C.J, Czekster, C.M.
Deposit date:2023-07-11
Release date:2024-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.586 Å)
Cite:Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
6TAF
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Bd0314 DslA E154Q mutant
Descriptor: ACETATE ION, SLT domain-containing protein, SULFATE ION
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2019-10-29
Release date:2020-07-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.336 Å)
Cite:A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus.
Nat Commun, 11, 2020
6TA9
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BU of 6ta9 by Molmil
Bd0314 DslA wild-type form 1
Descriptor: SLT domain-containing protein, SULFATE ION
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2019-10-29
Release date:2020-07-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.361 Å)
Cite:A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus.
Nat Commun, 11, 2020
5E3E
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BU of 5e3e by Molmil
Crystal structure of CdiA-CT/CdiI complex from Y. kristensenii 33638
Descriptor: CdiI immunity protein, Large exoprotein involved in heme utilization or adhesion, SODIUM ION
Authors:Michalska, K, Joachimiak, G, Jedrzejczak, R, Goulding, C.W, Joachimiak, A, Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI), Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-10-02
Release date:2015-11-25
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The CDI toxin of Yersinia kristensenii is a novel bacterial member of the RNase A superfamily.
Nucleic Acids Res., 45, 2017
7KW7
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BU of 7kw7 by Molmil
Atomic cryoEM structure of Hsp90-Hsp70-Hop-GR
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glucocorticoid receptor, Heat shock 70 kDa protein 1A, ...
Authors:Wang, R.Y, Noddings, C.M, Kirschke, E, Myasnikov, A, Johnson, J.L, Agard, D.A.
Deposit date:2020-11-30
Release date:2021-12-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structure of Hsp90-Hsp70-Hop-GR reveals the Hsp90 client-loading mechanism.
Nature, 601, 2022
6TAD
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BU of 6tad by Molmil
Bd0314 DslA E143Q mutant
Descriptor: SLT domain-containing protein
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2019-10-29
Release date:2020-07-15
Last modified:2020-10-07
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus.
Nat Commun, 11, 2020
8PQP
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BU of 8pqp by Molmil
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 D62N Mutant bound to ImmH-Forodesine
Descriptor: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, Nucleoside 2-deoxyribosyltransferase
Authors:Tang, P, Harding, C.J, Czekster, M.C.
Deposit date:2023-07-11
Release date:2024-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.709 Å)
Cite:Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
8PQT
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BU of 8pqt by Molmil
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 WT bound to Bis-Tris
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Nucleoside 2-deoxyribosyltransferase
Authors:Tang, P, Harding, C.J, Czekster, C.M.
Deposit date:2023-07-11
Release date:2024-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
8PQS
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BU of 8pqs by Molmil
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 E88A Mutant
Descriptor: Nucleoside 2-deoxyribosyltransferase
Authors:Tang, P, Harding, C.J, Czekster, C.M.
Deposit date:2023-07-11
Release date:2024-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
6N55
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BU of 6n55 by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidouridine
Descriptor: 2'-azido-2'-deoxyuridine, GLYCEROL, PHOSPHATE ION, ...
Authors:Cuthbert, B.J, Nainar, S, Spitale, R.C, Goulding, C.W.
Deposit date:2018-11-21
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.085 Å)
Cite:An optimized chemical-genetic method for cell-specific metabolic labeling of RNA.
Nat.Methods, 17, 2020
5T87
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BU of 5t87 by Molmil
Crystal structure of CDI complex from Cupriavidus taiwanensis LMG 19424
Descriptor: CdiA toxin, CdiI immunity protein
Authors:Michalska, K, Joachimiak, G, Jedrzejczak, R, Hayes, C.S, Goulding, C.W, Joachimiak, A, Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI), Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-09-06
Release date:2017-09-13
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016).
Proteins, 86 Suppl 1, 2018
6N53
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BU of 6n53 by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidouridine monophosphate
Descriptor: 2'-deoxy-2'-triaza-1,2-dien-2-ium-1-yl-uridine-5'-monophosphate, GLYCEROL, MAGNESIUM ION, ...
Authors:Cuthbert, B.J, Nainar, S, Spitale, R.C, Goulding, C.W.
Deposit date:2018-11-21
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An optimized chemical-genetic method for cell-specific metabolic labeling of RNA.
Nat.Methods, 17, 2020
6N54
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BU of 6n54 by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidocytidine monophosphate
Descriptor: 2'-azido-2'-deoxycytidine 5'-(dihydrogen phosphate), GLYCEROL, MAGNESIUM ION, ...
Authors:Cuthbert, B.J, Nainar, S, Spitale, R.C, Goulding, C.W.
Deposit date:2018-11-21
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.424 Å)
Cite:An optimized chemical-genetic method for cell-specific metabolic labeling of RNA.
Nat.Methods, 17, 2020
5T86
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BU of 5t86 by Molmil
Crystal structure of CDI complex from E. coli A0 34/86
Descriptor: ACETATE ION, CdiA toxin, CdiI immunity protein
Authors:Michalska, K, Stols, L, Jedrzejczak, R, Hayes, C.S, Goulding, C.W, Joachimiak, A, Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI), Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-09-06
Release date:2017-09-13
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of CDI complex from E. coli A0 34/86
To Be Published
5FFP
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BU of 5ffp by Molmil
Crystal structure of CdiI from Burkholderia dolosa AUO158
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Immunity 23 family protein
Authors:Michalska, K, Stols, L, Eschenfeldt, W, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)
Deposit date:2015-12-18
Release date:2016-01-20
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of CdiI from Burkholderia dolosa AUO158
To Be Published
4G6V
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BU of 4g6v by Molmil
CdiA-CT/CdiI toxin and immunity complex from Burkholderia pseudomallei
Descriptor: Adhesin/hemolysin, BROMIDE ION, CdiI
Authors:Morse, R.P, Nikolakakis, K, Willet, J, Gerrick, E, Low, D.A, Hayes, C.S, Goulding, C.W.
Deposit date:2012-07-19
Release date:2012-12-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural basis of toxicity and immunity in contact-dependent growth inhibition (CDI) systems.
Proc.Natl.Acad.Sci.USA, 109, 2012

225681

数据于2024-10-02公开中

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