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PDB: 158 results
3BV0
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BU of 3bv0 by Molmil
Crystal Structure of PLP Bound 7,8-Diaminopelargonic Acid Synthase in Mycobacterium Tuberculosis
Descriptor: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-01-04
Release date:2008-02-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
5ZZM
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BU of 5zzm by Molmil
E. coli 50S subunit bound HflX protein in presence of ATP (AMP-PNP) and GTP (GMP-PNP) analogs.
Descriptor: 23S rRNA, 5S rRNA, GTPase HflX
Authors:Dey, S.
Deposit date:2018-06-03
Release date:2018-06-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (8.1 Å)
Cite:The universally conserved GTPase HflX is an RNA helicase that restores heat-damagedEscherichia coliribosomes.
J. Cell Biol., 217, 2018
6CJD
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BU of 6cjd by Molmil
NMR Structure of Salmonella Type III Secretion system protein OrgC
Descriptor: Putative cytoplasmic protein
Authors:DEY, S, DE GUZMAN, R.N.
Deposit date:2018-02-26
Release date:2018-08-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A protein secreted by theSalmonellatype III secretion system controls needle filament assembly.
Elife, 7, 2018
8ABY
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BU of 8aby by Molmil
RNA polymerase bound to purified in vitro transcribed regulatory RNA putL - pause prone, closed clamp state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Dey, S, Weixlbaumer, A.
Deposit date:2022-07-05
Release date:2022-10-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
8AD1
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BU of 8ad1 by Molmil
RNA polymerase at U-rich pause bound to RNA putL triple mutant - pause prone, closed clamp state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Dey, S, Weixlbaumer, A.
Deposit date:2022-07-07
Release date:2022-10-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
8ACP
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BU of 8acp by Molmil
RNA polymerase at U-rich pause bound to regulatory RNA putL - inactive, open clamp state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Dey, S, Weixlbaumer, A.
Deposit date:2022-07-06
Release date:2022-10-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
8ABZ
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BU of 8abz by Molmil
RNA polymerase at U-rich pause bound to non-regulatory RNA - pause prone, closed clamp state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Dey, S, Weixlbaumer, A.
Deposit date:2022-07-05
Release date:2022-10-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
8AC2
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BU of 8ac2 by Molmil
RNA polymerase- post-terminated, open clamp state
Descriptor: DNA Non-template strand, DNA Template strand, DNA-directed RNA polymerase subunit alpha, ...
Authors:Dey, S, Weixlbaumer, A.
Deposit date:2022-07-05
Release date:2022-10-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
8AC1
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BU of 8ac1 by Molmil
RNA polymerase at U-rich pause bound to non-regulatory RNA - inactive, open clamp state
Descriptor: DNA Non-template strand, DNA Template strand, DNA-directed RNA polymerase subunit alpha, ...
Authors:Dey, S, Weixlbaumer, A.
Deposit date:2022-07-05
Release date:2022-10-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.06 Å)
Cite:Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
3DDN
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BU of 3ddn by Molmil
Crystal structure of hydroxypyruvic acid phosphate bound D-3-phosphoglycerate dehydrogenase in mycobacterium tuberculosis
Descriptor: 2-oxo-3-(phosphonooxy)propanoic acid, D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-06-05
Release date:2008-07-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural analysis of substrate and effector binding in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry, 47, 2008
3DC2
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BU of 3dc2 by Molmil
Crystal structure of serine bound D-3-phosphoglycerate dehydrogenase from Mycobacterium tuberculosis
Descriptor: D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID, SERINE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-06-03
Release date:2008-07-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of substrate and effector binding in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry, 47, 2008
3FGN
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BU of 3fgn by Molmil
Crystal structure of dethiobiotin synthetase in Mycobacterium tuberculosis
Descriptor: Dethiobiotin synthetase
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-12-08
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
3DRD
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BU of 3drd by Molmil
Crystal Structure of 7,8 Diaminopelargonic Acid Synthase Apoenzyme in Bacillus subtilis
Descriptor: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-07-11
Release date:2009-06-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
1YGY
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BU of 1ygy by Molmil
Crystal Structure of D-3-Phosphoglycerate dehydrogenase From Mycobacterium tuberculosis
Descriptor: D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID
Authors:Dey, S, Grant, G.A, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-01-05
Release date:2005-01-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Mycobacterium tuberculosis D-3-Phosphoglycerate Dehydrogenase: EXTREME ASYMMETRY IN A TETRAMER OF IDENTICAL SUBUNITS
J.Biol.Chem., 280, 2005
3DOD
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BU of 3dod by Molmil
Crystal Structure of PLP Bound 7,8-Diaminopelargonic Acid Synthase in Bacillus subtilis
Descriptor: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-07-03
Release date:2009-06-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
4QHT
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BU of 4qht by Molmil
Crystal structure of AAA+/ sigma 54 activator domain of the flagellar regulatory protein FlrC from Vibrio cholerae in ATP analog bound state
Descriptor: 1,2-ETHANEDIOL, Flagellar regulatory protein C, MAGNESIUM ION, ...
Authors:Dey, S, Biswas, M, Sen, U, Dasgupta, J.
Deposit date:2014-05-29
Release date:2014-07-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.559 Å)
Cite:Unique ATPase site architecture triggers cis-mediated synchronized ATP binding in heptameric AAA+-ATPase domain of flagellar regulatory protein FlrC
J.Biol.Chem., 290, 2015
4QHS
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BU of 4qhs by Molmil
Crystal structure of AAA+sigma 54 activator domain of the flagellar regulatory protein FlrC of Vibrio cholerae in nucleotide free state
Descriptor: 1,2-ETHANEDIOL, Flagellar regulatory protein C
Authors:Dey, S, Biswas, M, Sen, U, Dasgupta, J.
Deposit date:2014-05-29
Release date:2014-07-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unique ATPase site architecture triggers cis-mediated synchronized ATP binding in heptameric AAA+-ATPase domain of flagellar regulatory protein FlrC
J.Biol.Chem., 290, 2015
3FMF
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BU of 3fmf by Molmil
Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase complexed with 7,8 diaminopelargonic acid carbamate
Descriptor: 7-(CARBOXYAMINO)-8-AMINO-NONANOIC ACID, Dethiobiotin synthetase
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-12-21
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
3LV2
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BU of 3lv2 by Molmil
Crystal structure of Mycobacterium tuberculosis 7,8-diaminopelargonic acid synthase in complex with substrate analog sinefungin
Descriptor: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SINEFUNGIN
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2010-02-19
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
3FMI
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BU of 3fmi by Molmil
Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase complexed with 7-Keto 8-aminopelargonic acid
Descriptor: 7-KETO-8-AMINOPELARGONIC ACID, Dethiobiotin synthetase, SULFATE ION
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-12-22
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
3DU4
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BU of 3du4 by Molmil
Crystal structure of 7-keto-8-aminopelargonic acid bound 7,8-diaminopelargonic acid synthase in bacillus subtilis
Descriptor: 7-KETO-8-AMINOPELARGONIC ACID, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-07-16
Release date:2009-06-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
3FPA
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BU of 3fpa by Molmil
Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase complexed with dethiobiotin and phosphate
Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, Dethiobiotin synthetase, MAGNESIUM ION, ...
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2009-01-04
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase.
Biochemistry, 49, 2010
2PA3
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BU of 2pa3 by Molmil
crystal structure of serine bound G336V mutant of E.coli phosphoglycerate dehydrogenase
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-3-phosphoglycerate dehydrogenase, SERINE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2007-03-27
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:The Effect of Hinge Mutations on Effector Binding and Domain Rotation in Escherichia coli D-3-Phosphoglycerate Dehydrogenase.
J.Biol.Chem., 282, 2007
2P9C
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BU of 2p9c by Molmil
Crystal structure of serine bound G336V mutant of E.coli phosphoglycerate dehydrogenase
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-3-phosphoglycerate dehydrogenase, SERINE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2007-03-24
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:The Effect of Hinge Mutations on Effector Binding and Domain Rotation in Escherichia coli D-3-Phosphoglycerate Dehydrogenase
J.Biol.Chem., 282, 2007
2P9G
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BU of 2p9g by Molmil
Crystal structure of serine bound G336V,G337V double mutant of E.coli phosphoglycerate dehydrogenase
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-3-phosphoglycerate dehydrogenase, SERINE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2007-03-25
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Effect of Hinge Mutations on Effector Binding and Domain Rotation in Escherichia coli D-3-Phosphoglycerate Dehydrogenase.
J.Biol.Chem., 282, 2007

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