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PDB: 3021 件

2F6N
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Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the free form
分子名称: ZINC ION, bromodomain PHD finger transcription factor
著者Li, H, Patel, D.J.
登録日2005-11-29
公開日2006-07-11
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2F33
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NMR solution structure of Ca2+-loaded calbindin D28K
分子名称: Calbindin
著者Kojetin, D.J, Venters, R.A, Kordys, D.R, Thompson, R.J, Kumar, R, Cavanagh, J.
登録日2005-11-18
公開日2006-07-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure, binding interface and hydrophobic transitions of Ca(2+)-loaded calbindin-D(28K).
Nat.Struct.Mol.Biol., 13, 2006
3KHH
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Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesion
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 2-AMINOFLUORENE, 5'-D(*CP*CP*TP*A*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-10-30
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4.
Nat.Struct.Mol.Biol., 17, 2010
2F8S
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Crystal structure of Aa-Ago with externally-bound siRNA
分子名称: 5'-R(P*AP*GP*AP*CP*AP*GP*CP*AP*UP*AP*UP*AP*UP*GP*CP*UP*GP*UP*CP*UP*UP*U)-3', Argonaute protein
著者Yuan, Y.R, Chen, H.Y, Patel, D.J.
登録日2005-12-03
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA.
Structure, 14, 2006
3KHG
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Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 2-AMINOFLUORENE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-10-30
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4.
Nat.Struct.Mol.Biol., 17, 2010
2CEX
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Structure of a sialic acid binding protein (SiaP) in the presence of the sialic acid acid analogue Neu5Ac2en
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, PROTEIN HI0146, ...
著者Muller, A, Severi, E, Mulligan, C, Watts, A.G, Kelly, D.J, Wilson, K.S, Wilkinson, A.J, Thomas, G.H.
登録日2006-02-10
公開日2006-05-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conservation of Structure and Mechanism in Primary and Secondary Transporters Exemplified by Siap, a Sialic Acid Binding Virulence Factor from Haemophilus Influenzae
J.Biol.Chem., 281, 2006
3KHL
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Dpo4 post-extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion
分子名称: 2-AMINOFLUORENE, 5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*AP*(DDG))-3', ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-10-30
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4.
Nat.Struct.Mol.Biol., 17, 2010
2F7T
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Crystal structure of the catalytic domain of Mos1 mariner transposase
分子名称: MAGNESIUM ION, Mos1 transposase
著者Richardson, J.M, Dawson, A, Taylor, P, Finnegan, D.J, Walkinshaw, M.D.
登録日2005-12-01
公開日2006-03-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanism of Mos1 transposition: insights from structural analysis
Embo J., 25, 2006
2FHW
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Solution structure of human relaxin-3
分子名称: Relaxin 3 (Prorelaxin H3) (Insulin-like peptide INSL7) (Insulin-like peptide 7)
著者Rosengren, K.J, Craik, D.J.
登録日2005-12-27
公開日2006-01-24
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure and novel insights into the determinants of the receptor specificity of human relaxin-3.
J.Biol.Chem., 281, 2006
2EVS
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Crystal structure of human Glycolipid Transfer Protein complexed with n-hexyl-beta-D-glucoside
分子名称: DECANE, Glycolipid transfer protein, HEXANE, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-31
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2F2J
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Solution structure of [W19K, P20N, V21K]-kalata B1
分子名称: Kalata-B1
著者Clark, R.J, Daly, N.L, Craik, D.J.
登録日2005-11-17
公開日2006-01-31
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Structural plasticity of the cyclic cystine knot framework: implications for biological activity and drug design
Biochem.J., 394, 2006
2NOD
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MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH TETRAHYDROBIOPTERIN AND WATER BOUND IN ACTIVE CENTER
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, NITRIC OXIDE SYNTHASE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
登録日1998-03-05
公開日1999-03-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of nitric oxide synthase oxygenase dimer with pterin and substrate.
Science, 279, 1998
2F5G
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Crystal structure of IS200 transposase
分子名称: Transposase, putative
著者Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
登録日2005-11-25
公開日2005-12-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
2F4F
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Crystal structure of IS200 transposase
分子名称: MANGANESE (II) ION, Transposase, putative
著者Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
登録日2005-11-23
公開日2005-12-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
2EUK
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Crystal Structure of Human Glycolipid Transfer Protein complexed with 24:1 Galactosylceramide
分子名称: (15E)-TETRACOS-15-ENOIC ACID, Glycolipid transfer protein, N-OCTANE, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-28
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVT
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Crystal structure of D48V mutant of human Glycolipid Transfer Protein
分子名称: Glycolipid transfer protein, HEXANE
著者Malinina, L, Malakhova, M.L, Teplov, A, Brown, R.E, Patel, D.J.
登録日2005-10-31
公開日2005-11-15
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2E4L
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Thermodynamic and Structural Analysis of Thermolabile RNase HI from Shewanella oneidensis MR-1
分子名称: Ribonuclease HI
著者Tadokoro, T, You, D.J, Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2006-12-13
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural, thermodynamic, and mutational analyses of a psychrotrophic RNase HI.
Biochemistry, 46, 2007
2EHG
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Crystal structure of hyperthermophilic archaeal RNase HI
分子名称: ribonuclease HI
著者You, D.J, Chon, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-03-06
公開日2007-09-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Type 1 RNase H from a Hyperthermophilic Archaeon with Double-stranded RNA-dependent RNase Activity
To be Published
2F8T
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Crystal structure of Aa-Ago with externally-bound siRNA
分子名称: 26-MER, Argonaute protein
著者Yuan, Y.R, Chen, H.Y, Patel, D.J.
登録日2005-12-03
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA.
Structure, 14, 2006
2F6J
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Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the H3(1-15)K4me3 bound state
分子名称: ZINC ION, bromodomain PHD finger transcription factor, histone H3, ...
著者Li, H, Patel, D.J.
登録日2005-11-29
公開日2006-07-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2EW4
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Solution structure of MrIA
分子名称: MrIA
著者Nilsson, K.P, Lovelace, E.S, Caesar, C.E, Tynngard, N, Alewood, P.F, Johansson, H.M, Sharpe, I.A, Lewis, R.J, Daly, N.L, Craik, D.J.
登録日2005-11-02
公開日2005-11-15
最終更新日2020-06-24
実験手法SOLUTION NMR
主引用文献Solution structure of chi-conopeptide MrIA, a modulator of the human norepinephrine transporter
Biopolymers, 80, 2005
2ERI
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Solution structure of circulin B
分子名称: Circulin B
著者Craik, D.J, Daly, N.L.
登録日2005-10-24
公開日2005-11-15
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structure of circullin B and implications for antimicrobial activity of the cyclotides
INT.J.PEPT.PROTEIN RES., 11, 2005
2E3W
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X-ray structure of native RNase A
分子名称: CHLORIDE ION, Ribonuclease pancreatic
著者Boerema, D.J, Tereshko, V.A, Kent, S.B.H.
登録日2006-11-30
公開日2007-10-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Total synthesis by modern chemical ligation methods and high resolution (1.1 A) X-ray structure of ribonuclease A
Biopolymers, 90, 2008
2FQA
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Violacin A
分子名称: violacin 1
著者Ireland, D.C, Craik, D.J, Daly, N.L.
登録日2006-01-17
公開日2006-01-31
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Discovery and Characterization of a Linear Cyclotide from Viola odorata: Implications for the Processing of Circular Proteins
J.Mol.Biol., 357, 2006
2FSA
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Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the H3(1-15)K4ME2 bound state
分子名称: Histone H3(1-15)K4me2 peptide, ZINC ION, bromodomain PHD finger transcription factor
著者Li, H, Patel, D.J.
登録日2006-01-21
公開日2006-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006

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