4HM1
| Naphthalene 1,2-Dioxygenase bound to 1-indanone | Descriptor: | 1,2-ETHANEDIOL, 2,3-dihydro-1H-inden-1-one, FE (III) ION, ... | Authors: | Ferraro, D.J, Ramaswamy, S. | Deposit date: | 2012-10-17 | Release date: | 2013-10-30 | Last modified: | 2024-11-06 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Naphthalene 1,2-Dioxygenase bound to 1-indanone To be Published
|
|
1BJC
| SOLUTION NMR STRUCTURE OF AMYLOID BETA[F16], RESIDUES 1-28, 15 STRUCTURES | Descriptor: | AMYLOID BETA-PEPTIDE | Authors: | Poulsen, S.-A, Watson, A.A, Craik, D.J. | Deposit date: | 1998-06-23 | Release date: | 1998-11-18 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structures in aqueous SDS micelles of two amyloid beta peptides of A beta(1-28) mutated at the alpha-secretase cleavage site (K16E, K16F) J.Struct.Biol., 130, 2000
|
|
1BJB
| SOLUTION NMR STRUCTURE OF AMYLOID BETA[E16], RESIDUES 1-28, 14 STRUCTURES | Descriptor: | AMYLOID BETA-PEPTIDE | Authors: | Poulsen, S.-A, Watson, A.A, Craik, D.J. | Deposit date: | 1998-06-23 | Release date: | 1998-11-04 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structures in aqueous SDS micelles of two amyloid beta peptides of A beta(1-28) mutated at the alpha-secretase cleavage site (K16E, K16F) J.Struct.Biol., 130, 2000
|
|
1OTJ
| Crystal structure of APO (iron-free) TauD | Descriptor: | 2-AMINOETHANESULFONIC ACID, Alpha-Ketoglutarate-Dependent Taurine Dioxygenase, CHLORIDE ION | Authors: | O'Brien, J.R, Schuller, D.J, Yang, V.S, Dillard, B.D, Lanzilotta, W.N. | Deposit date: | 2003-03-21 | Release date: | 2003-09-23 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Substrate-induced conformational changes in Escherichia coli taurine/alpha-ketoglutarate dioxygenase and insight into the oligomeric structure Biochemistry, 42, 2003
|
|
2A5R
| Complex of tetra-(4-n-methylpyridyl) porphin with monomeric parallel-stranded DNA tetraplex, snap-back 3+1 3' G-tetrad, single-residue chain reversal loops, GAG triad in the context of GAAG diagonal loop, C-MYC promoter, NMR, 6 struct. | Descriptor: | (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin, 5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*IP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3' | Authors: | Phan, A.T, Kuryavyi, V.V, Gaw, H.Y, Patel, D.J. | Deposit date: | 2005-06-30 | Release date: | 2005-07-26 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Small-molecule interaction with a five-guanine-tract G-quadruplex structure from the human MYC promoter. Nat.Chem.Biol., 1, 2005
|
|
4HKV
| Naphthalene 1,2-Dioxygenase bound to benzamide | Descriptor: | 1,2-ETHANEDIOL, BENZAMIDE, FE (III) ION, ... | Authors: | Ferraro, D.J, Ramaswamy, S. | Deposit date: | 2012-10-15 | Release date: | 2013-10-30 | Last modified: | 2024-09-18 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase. Iucrj, 4, 2017
|
|
4HM0
| Naphthalene 1,2-Dioxygenase bound to indole-3-acetate | Descriptor: | 1,2-ETHANEDIOL, 1H-INDOL-3-YLACETIC ACID, FE (III) ION, ... | Authors: | Ferraro, D.J, Ramaswamy, S. | Deposit date: | 2012-10-17 | Release date: | 2013-10-30 | Last modified: | 2024-09-18 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase. Iucrj, 4, 2017
|
|
1OYX
| CRYSTAL STRUCTURE OF 3-MBT REPEATS OF LETHAL (3) MALIGNANT BRAIN TUMOR (SELENO-MET) AT 1.85 ANGSTROM | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lethal(3)malignant brain tumor-like protein, SULFATE ION | Authors: | Wang, W.K, Tereshko, V, Boccuni, P, MacGrogan, D, Nimer, S.D, Patel, D.J. | Deposit date: | 2003-04-07 | Release date: | 2003-08-19 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Malignant brain tumor repeats: a three-leaved propeller architecture with ligand/peptide binding pockets. Structure, 11, 2003
|
|
2CNX
| WDR5 and Histone H3 Lysine 4 dimethyl complex at 2.1 angstrom | Descriptor: | HISTONE H3 DIMETHYL-LYSINE 4, WD-REPEAT PROTEIN 5 | Authors: | Ruthenburg, A.J, Wang, W, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L. | Deposit date: | 2006-05-25 | Release date: | 2006-07-03 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex Nat.Struct.Mol.Biol., 13, 2006
|
|
4HM2
| Naphthalene 1,2-Dioxygenase bound to ethylphenylsulfide | Descriptor: | (ethylsulfanyl)benzene, 1,2-ETHANEDIOL, FE (III) ION, ... | Authors: | Ferraro, D.J, Ramaswamy, S. | Deposit date: | 2012-10-17 | Release date: | 2013-10-30 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase. Iucrj, 4, 2017
|
|
4HNO
| High resolution crystal structure of DNA Apurinic/apyrimidinic (AP) endonuclease IV Nfo from Thermatoga maritima | Descriptor: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ... | Authors: | Shin, D.S, Hosfield, D.J, Arvai, A.S, Tsutakawa, S.E, Tainer, J.A. | Deposit date: | 2012-10-20 | Release date: | 2013-01-23 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (0.9194 Å) | Cite: | Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes. J.Biol.Chem., 288, 2013
|
|
4HJL
| Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene | Descriptor: | 1,2-ETHANEDIOL, 1-chloronaphthalene, FE (III) ION, ... | Authors: | Ferraro, D.J, Ramaswamy, S. | Deposit date: | 2012-10-12 | Release date: | 2013-10-16 | Last modified: | 2024-11-06 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase. Iucrj, 4, 2017
|
|
4HM7
| Naphthalene 1,2-Dioxygenase bound to styrene | Descriptor: | 1,2-ETHANEDIOL, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Ferraro, D.J, Ramaswamy, S. | Deposit date: | 2012-10-17 | Release date: | 2013-10-30 | Last modified: | 2024-11-06 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase. Iucrj, 4, 2017
|
|
2CFI
| The hydrolase domain of human 10-FTHFD in complex with 6- formyltetrahydropterin | Descriptor: | 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE, 6-FORMYLTETRAHYDROPTERIN, SULFATE ION | Authors: | Kursula, P, Stenmark, P, Arrowsmith, C, Edwards, A, Ehn, M, Graslund, S, Hammarstrom, M, Hallberg, M, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Ogg, D.J, Persson, C, Sagemark, J, Schuler, H, Sundstrom, M, Thorsell, A, Weigelt, J. | Deposit date: | 2006-02-21 | Release date: | 2006-03-14 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structures of the Hydrolase Domain of Human 10-Formyltetrahydrofolate Dehydrogenase and its Complex with a Substrate Analogue. Acta Crystallogr.,Sect.D, 62, 2006
|
|
2B38
| Solution structure of kalata B8 | Descriptor: | kalata B8 | Authors: | Daly, N.L, Clark, R.J, Plan, M.R, Craik, D.J. | Deposit date: | 2005-09-19 | Release date: | 2006-01-31 | Last modified: | 2024-10-30 | Method: | SOLUTION NMR | Cite: | Kalata B8, a novel antiviral circular protein, exhibits conformational flexibility in the cystine knot motif Biochem.J., 393, 2006
|
|
2BAS
| Crystal Structure of the Bacillus subtilis YkuI Protein, with an EAL Domain. | Descriptor: | BETA-MERCAPTOETHANOL, YkuI protein | Authors: | Minasov, G, Brunzelle, J.S, Shuvalova, L, Miller, D.J, Collart, F.R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG) | Deposit date: | 2005-10-14 | Release date: | 2005-11-29 | Last modified: | 2024-03-06 | Method: | X-RAY DIFFRACTION (2.61 Å) | Cite: | Crystal structures of YkuI and its complex with second messenger cyclic Di-GMP suggest catalytic mechanism of phosphodiester bond cleavage by EAL domains. J.Biol.Chem., 284, 2009
|
|
1CD8
| |
2ARG
| FORMATION OF AN AMINO ACID BINDING POCKET THROUGH ADAPTIVE ZIPPERING-UP OF A LARGE DNA HAIRPIN LOOP, NMR, 9 STRUCTURES | Descriptor: | ARGININEAMIDE, DNA APTAMER [5'-D (*TP*GP*AP*CP*CP*AP*GP*GP*GP*CP*AP*AP*AP*CP*GP*GP*TP*AP* GP*GP*TP*GP*AP*GP*TP*GP*GP*TP*CP*A)-3'] | Authors: | Lin, C.H, Wang, W, Jones, R.A, Patel, D.J. | Deposit date: | 1998-08-19 | Release date: | 1999-03-23 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Formation of an amino-acid-binding pocket through adaptive zippering-up of a large DNA hairpin loop. Chem.Biol., 5, 1998
|
|
2CB6
| Crystal structure of the catalytic domain of the mosquitocidal toxin from Bacillus sphaericus, mutant E195Q | Descriptor: | MOSQUITOCIDAL TOXIN | Authors: | Reinert, D.J, Carpusca, I, Aktories, K, Schulz, G.E. | Deposit date: | 2005-12-29 | Release date: | 2006-02-22 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structure of the Mosquitocidal Toxin from Bacillus Sphaericus. J.Mol.Biol., 357, 2006
|
|
1D6D
| SOLUTION DNA STRUCTURE CONTAINING (A-A)-T TRIADS INTERDIGITATED BETWEEN A-T BASE PAIRS AND GGGG TETRADS; NMR, 8 STRUCT. | Descriptor: | 5'-D(*AP*AP*GP*GP*TP*TP*TP*TP*AP*AP*GP*G)-3' | Authors: | Kuryavyi, V.V, Kettani, A, Wang, W, Jones, R, Patel, D.J. | Deposit date: | 1999-10-13 | Release date: | 2000-01-17 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | A diamond-shaped zipper-like DNA architecture containing triads sandwiched between mismatches and tetrads. J.Mol.Biol., 295, 2000
|
|
1CNN
| OMEGA-CONOTOXIN MVIIC FROM CONUS MAGUS | Descriptor: | OMEGA-CONOTOXIN MVIIC | Authors: | Nielsen, K.J, Adams, D, Thomas, L, Bond, T, Alewood, P.F, Craik, D.J, Lewis, R.J. | Deposit date: | 1999-05-20 | Release date: | 2000-05-31 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Structure-activity relationships of omega-conotoxins MVIIA, MVIIC and 14 loop splice hybrids at N and P/Q-type calcium channels. J.Mol.Biol., 289, 1999
|
|
2CAY
| Vps36 N-terminal PH domain | Descriptor: | SULFATE ION, VACUOLAR PROTEIN SORTING PROTEIN 36 | Authors: | Teo, H, Williams, R.L, Perisic, O, Gill, D.J. | Deposit date: | 2005-12-23 | Release date: | 2006-04-07 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Escrt-I Core and Escrt-II Glue Domain Structures Reveal Role for Glue in Linking to Escrt-I and Membranes. Cell(Cambridge,Mass.), 125, 2006
|
|
2CEY
| Apo Structure of SiaP | Descriptor: | PROTEIN HI0146, ZINC ION | Authors: | Muller, A, Severi, E, Mulligan, C, Watts, A.G, Kelly, D.J, Wilson, K.S, Wilkinson, A.J, Thomas, G.H. | Deposit date: | 2006-02-11 | Release date: | 2006-05-15 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Conservation of Structure and Mechanism in Primary and Secondary Transporters Exemplified by Siap, a Sialic Acid Binding Virulence Factor from Haemophilus Influenzae J.Biol.Chem., 281, 2006
|
|
2CCF
| Antiparallel Configuration of pLI E20S | Descriptor: | General control protein GCN4 | Authors: | Yadav, M.K, Leman, L.J, Price, D.J, Brooks 3rd, C.L, Stout, C.D, Ghadiri, M.R. | Deposit date: | 2006-01-16 | Release date: | 2006-04-06 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Coiled coils at the edge of configurational heterogeneity. Structural analyses of parallel and antiparallel homotetrameric coiled coils reveal configurational sensitivity to a single solvent-exposed amino acid substitution. Biochemistry, 45, 2006
|
|
2CAZ
| ESCRT-I core | Descriptor: | PROTEIN SRN2, SUPPRESSOR PROTEIN STP22 OF TEMPERATURE-SENSITIVE ALPHA-FACTOR RECEPTOR AND ARGININE PERMEASE, VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS28 | Authors: | Gill, D.J, Teo, H, Sun, J, Perisic, O, Veprintsev, D.B, Vallis, Y, Emr, S.D, Williams, R.L. | Deposit date: | 2005-12-23 | Release date: | 2006-04-07 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (3.6 Å) | Cite: | Escrt-I Core and Escrt-II Glue Domain Structures Reveal Role for Glue in Linking to Escrt-I and Membranes. Cell(Cambridge,Mass.), 125, 2006
|
|