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PDB: 3016 results

3RB3
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BU of 3rb3 by Molmil
Dpo4 extension ternary complex with 3'-terminal primer A base opposite the 1-methylguanine (m1g) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RBD
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BU of 3rbd by Molmil
Dpo4 extension ternary complex with 3'-terminal primer C base opposite the 3-methylcytosine (m3c) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-29
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RSD
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BU of 3rsd by Molmil
STRUCTURE OF THE D121N VARIANT OF RIBONUCLEASE A
Descriptor: RIBONUCLEASE A
Authors:Schultz, L.W, Quirk, D.J, Raines, R.T.
Deposit date:1998-02-05
Release date:1998-07-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:His...Asp catalytic dyad of ribonuclease A: structure and function of the wild-type, D121N, and D121A enzymes.
Biochemistry, 37, 1998
3QZV
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BU of 3qzv by Molmil
Crystal Structure of BPTF PHD-linker-bromo in complex with histone H4K12ac peptide
Descriptor: Histone H4, Nucleosome-remodeling factor subunit BPTF, ZINC ION
Authors:Li, H, Ruthenburg, A.J, Patel, D.J.
Deposit date:2011-03-07
Release date:2011-06-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Recognition of a Mononucleosomal Histone Modification Pattern by BPTF via Multivalent Interactions.
Cell(Cambridge,Mass.), 145, 2011
3RIC
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BU of 3ric by Molmil
Crystal Structure of D48V||A47D mutant of Human Glycolipid Transfer Protein complexed with 3-O-sulfo-galactosylceramide containing nervonoyl acyl chain (24:1)
Descriptor: (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE, Glycolipid transfer protein
Authors:Samygina, V, Ochoa-Lizarralde, B, Patel, D.J, Brown, R.E, Malinina, L.
Deposit date:2011-04-13
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enhanced selectivity for sulfatide by engineered human glycolipid transfer protein.
Structure, 19, 2011
3RIU
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BU of 3riu by Molmil
Crystal structure of Drosophila hexameric C3PO formed by truncated Translin and Trax
Descriptor: Translin, Translin associated factor X, isoform B
Authors:Tian, Y, Simanshu, D.K, Patel, D.J.
Deposit date:2011-04-14
Release date:2011-05-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Multimeric assembly and biochemical characterization of the Trax-translin endonuclease complex.
Nat.Struct.Mol.Biol., 18, 2011
3ODN
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BU of 3odn by Molmil
The crystal structure of Drosophila Dally-Like Protein core domain
Descriptor: Dally-like protein
Authors:Kim, M.-S, Leahy, D.J.
Deposit date:2010-08-11
Release date:2011-07-27
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the protein core of the glypican Dally-like and localization of a region important for hedgehog signaling.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O6E
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BU of 3o6e by Molmil
Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end
Descriptor: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3')
Authors:Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
Deposit date:2010-07-28
Release date:2011-01-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.904 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3OD4
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BU of 3od4 by Molmil
Crystal Structure of Factor Inhibiting HIF-1 Alpha Complexed with Inhibitor
Descriptor: 8-hydroxyquinoline-5-carboxylic acid, GLYCEROL, Hypoxia-inducible factor 1-alpha inhibitor, ...
Authors:King, O.N.F, Bashford-Rogers, R, Maloney, D.J, Jadhav, A, Heightman, T.D, Simeonov, A, Clifton, I.J, McDonough, M.A, Schofield, C.J.
Deposit date:2010-08-10
Release date:2011-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Factor Inhibiting HIF-1 Alpha Complexed with Inhibitor
To be Published
3OWW
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BU of 3oww by Molmil
Crystal structure of the glycine riboswitch bound to glycine
Descriptor: GLYCINE, MAGNESIUM ION, domain II of glycine riboswitch
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2010-09-20
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3RB6
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BU of 3rb6 by Molmil
Dpo4 extension ternary complex with 3'-terminal primer A base opposite the 3-methylcytosine (m3c) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RB0
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BU of 3rb0 by Molmil
Dpo4 extension ternary complex with 3'-terminal primer G base opposite the 1-methylguanine (M1G) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*C*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.225 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RGC
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BU of 3rgc by Molmil
The virulence factor PEB4 and the periplasmic protein Cj1289 are two structurally related SurA-like chaperones in the human pathogen Campylobacter jejuni
Descriptor: Possible periplasmic protein
Authors:Kale, A, Phansopa, C, Suwannachart, C, Craven, C.J, Rafferty, J, Kelly, D.J.
Deposit date:2011-04-08
Release date:2011-04-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The virulence factor PEB4 and the periplasmic protein Cj1289 are two structurally related SurA-like chaperones in the human pathogen Campylobacter jejuni
To be Published
3RFW
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BU of 3rfw by Molmil
The virulence factor PEB4 and the periplasmic protein Cj1289 are two structurally-related SurA-like chaperones in the human pathogen Campylobacter jejuni
Descriptor: Cell-binding factor 2
Authors:Kale, A, Phansopa, C, Suwannachart, C, Craven, C.J, Rafferty, J, Kelly, D.J.
Deposit date:2011-04-07
Release date:2011-04-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The virulence factor PEB4 and the periplasmic protein Cj1289 are two structurally-related SurA-like chaperones in the human pathogen Campylobacter jejuni
To be Published
3QZT
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BU of 3qzt by Molmil
Crystal Structure of BPTF bromo in complex with histone H4K16ac - Form II
Descriptor: GLYCEROL, Histone H4, Nucleosome-remodeling factor subunit BPTF
Authors:Li, H, Ruthenburg, A.J, Patel, D.J.
Deposit date:2011-03-07
Release date:2011-06-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of a Mononucleosomal Histone Modification Pattern by BPTF via Multivalent Interactions.
Cell(Cambridge,Mass.), 145, 2011
3RBE
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BU of 3rbe by Molmil
Dpo4 extension ternary complex with 3'-terminal primer t base opposite the 3-methylcytosine (m3c) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-29
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RLB
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BU of 3rlb by Molmil
Crystal structure at 2.0 A of the S-component for thiamin from an ECF-type ABC transporter
Descriptor: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, ThiT, nonyl beta-D-glucopyranoside
Authors:Erkens, G.B, Berntsson, R.P.-A, Fulyani, F, Majsnerowska, M, Vujicic-Zagar, A, ter Beek, J, Poolman, B, Slotboom, D.J.
Deposit date:2011-04-19
Release date:2011-06-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis of modularity in ECF-type ABC transporters.
Nat.Struct.Mol.Biol., 18, 2011
3RAQ
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BU of 3raq by Molmil
Dpo4 extension ternary complex with 3'-terminal primer C base opposite the 1-methylguanine (MG1) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3Q7D
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BU of 3q7d by Molmil
Structure of (R)-naproxen bound to mCOX-2.
Descriptor: (2R)-2-(6-methoxynaphthalen-2-yl)propanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Duggan, K.C, Hermanson, D.J, Musee, J, Prusakiewicz, J.J, Scheib, J, Carter, B.D, Banerjee, S, Marnett, L.J.
Deposit date:2011-01-04
Release date:2011-11-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:(R)-Profens are substrate-selective inhibitors of endocannabinoid oxygenation by COX-2.
Nat.Chem.Biol., 7, 2011
3RB4
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BU of 3rb4 by Molmil
Dpo4 extension ternary complex with 3'-terminal primer G base opposite the 3-methylcytosine (m3c) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RM1
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BU of 3rm1 by Molmil
1.24 Angstrom X-ray structure of bovine TRTK12-Ca(2+)-S100B D63N
Descriptor: CALCIUM ION, F-actin-capping protein subunit alpha-2, Protein S100-B
Authors:Liriano, M.A, Weber, D.J.
Deposit date:2011-04-20
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published
3RAX
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BU of 3rax by Molmil
Dpo4 extension ternary complex with 3'-terminal primer T base opposite the 1-methylguanine (M1G) lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O, Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.891 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RLZ
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BU of 3rlz by Molmil
2.0 Angstrom X-ray structure of bovine Ca(2+)-S100B D63N
Descriptor: CALCIUM ION, Protein S100-B
Authors:Liriano, M.A, Weber, D.J.
Deposit date:2011-04-20
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published
3RR3
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BU of 3rr3 by Molmil
Structure of (R)-flurbiprofen bound to mCOX-2
Descriptor: (2R)-2-(3-fluoro-4-phenyl-phenyl)propanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Duggan, K.C, Hermanson, D.J, Musee, J, Prusakiewicz, J.J, Scheib, J, Carter, B.D, Banerjee, S, Oates, J.A, Marnett, L.J.
Deposit date:2011-04-28
Release date:2011-11-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.842 Å)
Cite:(R)-Profens are substrate-selective inhibitors of endocannabinoid oxygenation by COX-2.
Nat.Chem.Biol., 7, 2011
3PT6
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BU of 3pt6 by Molmil
Crystal structure of mouse DNMT1(650-1602) in complex with DNA
Descriptor: DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (cytosine-5)-methyltransferase 1, ...
Authors:Song, J, Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011

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数据于2024-08-28公开中

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