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PDB: 3048 results

2NQJ
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Crystal structure of Escherichia coli endonuclease IV (Endo IV) E261Q mutant bound to damaged DNA
Descriptor: 5'-D(*CP*GP*TP*CP*GP*TP*CP*GP*GP*GP*GP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*CP*CP*(3DR)P*CP*GP*AP*CP*GP*AP*CP*G)-3', Endonuclease 4, ...
Authors:Garcin-Hosfield, E.D, Hosfield, D.J, Tainer, J.A.
Deposit date:2006-10-31
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:DNA apurinic-apyrimidinic site binding and excision by endonuclease IV.
Nat.Struct.Mol.Biol., 15, 2008
2NQ9
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High resolution crystal structure of Escherichia coli endonuclease IV (Endo IV) Y72A mutant bound to damaged DNA
Descriptor: 5'-D(*AP*TP*AP*TP*CP*T)-3', 5'-D(*AP*TP*CP*TP*GP*AP*AP*GP*TP*AP*T)-3', 5'-D(P*(3DR)P*AP*GP*AP*T)-3', ...
Authors:Garcin-Hosfield, E.D, Hosfield, D.J, Tainer, J.A.
Deposit date:2006-10-30
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:DNA apurinic-apyrimidinic site binding and excision by endonuclease IV.
Nat.Struct.Mol.Biol., 15, 2008
2MPM
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Structural Basis of Receptor Sulfotyrosine Recognition by a CC Chemokine: the N-terminal Region of CCR3 Bound to CCL11/Eotaxin-1
Descriptor: CCR3, Eotaxin
Authors:Millard, C.J, Ludeman, J.P, Canals, M, Bridgford, J.L, Hinds, M.G, Clayton, D.J, Christopoulos, A, Payne, R.J, Stone, M.J.
Deposit date:2014-05-26
Release date:2014-12-10
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Structural Basis of Receptor Sulfotyrosine Recognition by a CC Chemokine: The N-Terminal Region of CCR3 Bound to CCL11/Eotaxin-1.
Structure, 22, 2014
2N09
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NMR structure of a short hydrophobic 11mer peptide in DMSO-d6/H2O (1:3) solution
Descriptor: Short hydrophobic peptide with cyclic constraints
Authors:Hoang, H.N, Song, K, Hill, T.A, Derksen, D.R, Edmonds, D.J, Kok, W.M, Limberakis, C, Liras, S, Loria, P.M, Mascitti, V, Mathiowetz, A.M, Mitchell, J.M, Piotrowski, D.W, Price, D.A, Stanton, R.V, Suen, J.Y, Withka, J.M, Griffith, D.A, Fairlie, D.P.
Deposit date:2015-03-04
Release date:2015-04-15
Last modified:2015-05-27
Method:SOLUTION NMR
Cite:Short Hydrophobic Peptides with Cyclic Constraints Are Potent Glucagon-like Peptide-1 Receptor (GLP-1R) Agonists.
J.Med.Chem., 58, 2015
2N2Q
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NMR solution structure of HsAFP1
Descriptor: Defensin-like protein 1
Authors:Harvey, P.J, Craik, D.J, Vriens, K.
Deposit date:2015-05-11
Release date:2015-07-22
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Synergistic Activity of the Plant Defensin HsAFP1 and Caspofungin against Candida albicans Biofilms and Planktonic Cultures.
Plos One, 10, 2015
2NQH
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High Resolution crystal structure of Escherichia coli endonuclease IV (Endo IV) E261Q mutant
Descriptor: Endonuclease 4, PHOSPHATE ION, ZINC ION
Authors:Garcin-Hosfield, E.D, Hosfield, D.J, Tainer, J.A.
Deposit date:2006-10-31
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:DNA apurinic-apyrimidinic site binding and excision by endonuclease IV.
Nat.Struct.Mol.Biol., 15, 2008
2N5G
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BU of 2n5g by Molmil
NMR structure of KorA, a plasmid-encoded, global transcription regulator KorA
Descriptor: TrfB transcriptional repressor protein
Authors:Rajasekar, K.V, Lovering, A.L, Dancea, F.V, Scott, D.J, Harris, S, Bingle, L.E, Roessle, M, Thomas, C.M, Hyde, E.I, White, S.A.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Flexibility of KorA, a plasmid-encoded, global transcription regulator, in the presence and the absence of its operator.
Nucleic Acids Res., 44, 2016
2N5I
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PltL-pyrrolyl
Descriptor: (3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(1H-pyrrol-2-ylcarbonyl)amino]ethyl}amino)propyl]amino}butyl dihydrogen phosphate, Peptidyl carrier protein PltL
Authors:Jaremko, M.J, Lee, D.J, Burkart, M.D.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
J.Am.Chem.Soc., 137, 2015
2M2Q
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Solution structure of MCh-1: A novel inhibitor cystine knot peptide from Momordica charantia
Descriptor: Inhibitor cystine knot peptide MCh-1
Authors:He, W, Chan, L, Clark, R.J, Tang, J, Zeng, G, Franco, O.L, Cantacessi, C, Craik, D.J, Daly, N.L, Tan, N.
Deposit date:2013-01-01
Release date:2013-11-06
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Novel Inhibitor Cystine Knot Peptides from Momordica charantia.
Plos One, 8, 2013
2MGO
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NMR solution structure of oxytocin
Descriptor: Oxytocin
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2013-11-01
Release date:2014-10-22
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Oxytocic plant cyclotides as templates for peptide G protein-coupled receptor ligand design.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MN1
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Solution Structure of kalata B1[W23WW]
Descriptor: kalata B1[W23WW]
Authors:Henriques, S.T, Huang, Y.H, Chaousis, S, Wang, C.K, Craik, D.J.
Deposit date:2014-03-26
Release date:2015-05-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Anticancer and toxic properties of cyclotides are dependent on phosphatidylethanolamine phospholipid targeting.
Chembiochem, 15, 2014
2M2Y
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Solution structure of the antimicrobial peptide Btd-2[3,4]
Descriptor: BTD-2[3,4]
Authors:Conibear, A.C, Rosengren, K, Daly, N.L, Troiera Henriques, S, Craik, D.J.
Deposit date:2013-01-03
Release date:2013-02-27
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:The cyclic cystine ladder in theta-defensins is important for structure and stability, but not antibacterial activity.
J.Biol.Chem., 288, 2013
2M13
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BU of 2m13 by Molmil
The ZZ domain of cytoplasmic polyadenylation element binding protein 1 (CPEB1)
Descriptor: Cytoplasmic polyadenylation element-binding protein 1, ZINC ION
Authors:Lee, B.M, Merkel, D.J, Wells, S.B, Hilburn, B.C, Elazzouzi, F, Perez-Alvarado, G.C.
Deposit date:2012-11-14
Release date:2013-04-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The C-Terminal Region of Cytoplasmic Polyadenylation Element Binding Protein Is a ZZ Domain with Potential for Protein-Protein Interactions.
J.Mol.Biol., 425, 2013
2LYE
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BU of 2lye by Molmil
High resolution NMR solution structure of a symmetrical theta-defensin, BTD-2
Descriptor: BTD-2
Authors:Conibear, A.C, Rosengren, K, Harvey, P.J, Craik, D.J.
Deposit date:2012-09-18
Release date:2012-11-28
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Structural characterization of the cyclic cystine ladder motif of theta-defensins.
Biochemistry, 51, 2012
2O4C
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BU of 2o4c by Molmil
Crystal Structure of D-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
Descriptor: Erythronate-4-phosphate dehydrogenase, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Ha, J.Y, Lee, J.H, Kim, K.H, Kim, D.J, Lee, H.H, Kim, H.K, Yoon, H.J, Suh, S.W.
Deposit date:2006-12-04
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of d-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
J.Mol.Biol., 366, 2007
2KF5
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BU of 2kf5 by Molmil
Barnase bound to d(CGAC), low pressure
Descriptor: Ribonuclease
Authors:Williamson, M.P, Wilton, D.J.
Deposit date:2009-02-11
Release date:2009-12-08
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Pressure-dependent structure changes in barnase on ligand binding reveal intermediate rate fluctuations.
Biophys.J., 97, 2009
2KF7
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BU of 2kf7 by Molmil
Structure of a two-G-tetrad basket-type intramolecular G-quadruplex formed by human telomeric repeats in K+ solution (with G7-to-BRG substitution)
Descriptor: HUMAN TELOMERE DNA
Authors:Lim, K.W, Amrane, S, Bouaziz, S, Xu, W, Mu, Y, Patel, D.J, Luu, K.N, Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
2KRA
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Solution structure of Bv8
Descriptor: Prokineticin Bv8
Authors:Daly, N.L, Craik, D.J, Mobli, M.
Deposit date:2009-12-14
Release date:2010-08-11
Last modified:2014-04-23
Method:SOLUTION NMR
Cite:Chemical synthesis and structure of the prokineticin Bv8
CHEMBIOCHEM, 11, 2010
2O0I
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crystal structure of the R185A mutant of the N-terminal domain of the Group B Streptococcus Alpha C protein
Descriptor: C protein alpha-antigen
Authors:Hogle, J.M, Filman, D.J, Baron, M.J, Madoff, L.C, Iglesias, A.
Deposit date:2006-11-27
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Identification of a glycosaminoglycan binding region of the alpha C protein that mediates entry of group B streptococci into host cells.
J.Biol.Chem., 282, 2007
2OE6
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BU of 2oe6 by Molmil
2.4A X-ray crystal structure of unliganded RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang
Descriptor: RNA (5'-R(*CP*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*C)-3'), RNA (5'-R(*GP*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*C)-3')
Authors:Hermann, T, Tereshko, V, Skripkin, E, Patel, D.J.
Deposit date:2006-12-28
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007
2KF8
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Structure of a two-G-tetrad basket-type intramolecular G-quadruplex formed by human telomeric repeats in K+ solution
Descriptor: HUMAN TELOMERE DNA
Authors:Lim, K.W, Amrane, S, Bouaziz, S, Xu, W, Mu, Y, Patel, D.J, Luu, K.N, Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
2KGI
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Solution structure of JARID1A C-terminal PHD finger in complex with H3(1-9)K4me3
Descriptor: H3(1-9)K4me3, Histone demethylase JARID1A, ZINC ION
Authors:Song, J, Wang, Z, Patel, D.J.
Deposit date:2009-03-12
Release date:2009-05-05
Last modified:2020-02-26
Method:SOLUTION NMR
Cite:Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger.
Nature, 459, 2009
2KBM
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Ca-S100A1 interacting with TRTK12
Descriptor: CALCIUM ION, F-actin-capping protein subunit alpha-2, Protein S100-A1
Authors:Wright, N.T, Varney, K.M, Cannon, B.R, Morgan, M, Weber, D.J.
Deposit date:2008-12-02
Release date:2009-02-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of Ca-S100A1-TRTK12
To be Published
2OGB
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BU of 2ogb by Molmil
Crystal structure of the C-terminal domain of mouse Nrdp1
Descriptor: GLYCEROL, RING finger protein 41, THIOCYANATE ION
Authors:Bouyain, S, Leahy, D.J.
Deposit date:2007-01-05
Release date:2007-01-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-based mutagenesis of the substrate-recognition domain of Nrdp1/FLRF identifies the binding site for the receptor tyrosine kinase ErbB3.
Protein Sci., 16, 2007
2LXV
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Dimeric pil-e g-quadruplex dna from neisseria gonorrhoeae, NMR 11 structures
Descriptor: 5'-D(*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*GP*GP
Authors:Kuryavyi, V, Patel, D.J.
Deposit date:2012-08-31
Release date:2012-11-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes.
Structure, 20, 2012

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数据于2024-11-06公开中

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