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PDB: 3016 results

1R1N
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BU of 1r1n by Molmil
Tri-nuclear oxo-iron clusters in the ferric binding protein from N. gonorrhoeae
Descriptor: Ferric-iron Binding Protein, OXO-IRON CLUSTER 1, OXO-IRON CLUSTER 2, ...
Authors:Zhu, H, Alexeev, D, Hunter, D.J, Campopiano, D.J, Sadler, P.J.
Deposit date:2003-09-24
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Oxo-iron clusters in a bacterial iron-trafficking protein: new roles for a conserved motif.
Biochem.J., 376, 2003
1H03
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BU of 1h03 by Molmil
Human CD55 domains 3 & 4
Descriptor: COMPLEMENT DECAY-ACCELERATING FACTOR
Authors:Williams, P, Chaudhry, Y, Goodfellow, I, Billington, J, Spiller, B, Evans, D.J, Lea, S.M.
Deposit date:2002-06-11
Release date:2003-03-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mapping Cd55 Function. The Structure of Two Pathogen-Binding Domains at 1.7 A
J.Biol.Chem., 278, 2003
2X9H
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BU of 2x9h by Molmil
CRYSTAL STRUCTURE OF MYOSIN-2 MOTOR DOMAIN IN COMPLEX WITH ADP- METAVANADATE AND PENTACHLOROCARBAZOLE
Descriptor: 2,3,4,6,8-PENTACHLORO-9H-CARBAZOL-1-OL, ADP METAVANADATE, MAGNESIUM ION, ...
Authors:Selvadurai, J, Kirst, J, Knoelker, H.J, Manstein, D.J.
Deposit date:2010-03-19
Release date:2011-05-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Myosin-2 Motor Domain in Complex with Adp-Metavanadate and Pentachlorocarbazole
To be Published
1W8C
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BU of 1w8c by Molmil
CO-CRYSTAL STRUCTURE OF 6-CYCLOHEXYLMETHOXY-8-ISOPROPYL-9H-PURIN-2- YLAMINE AND MONOMERIC CDK2
Descriptor: 6-(CYCLOHEXYLMETHOXY)-8-ISOPROPYL-9H-PURIN-2-AMINE, CELL DIVISION PROTEIN KINASE 2
Authors:Pratt, D.J, Endicott, J.A, Noble, M.E.M.
Deposit date:2004-09-20
Release date:2006-08-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:8-Substituted O6-Cyclohexylmethylguanine Cdk2 Inhibitors; Using Structure-Based Inhibitor Design to Optimise an Alternative Binding Mode.
J.Med.Chem., 57, 2014
1MWN
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BU of 1mwn by Molmil
Solution NMR structure of S100B bound to the high-affinity target peptide TRTK-12
Descriptor: CALCIUM ION, F-actin capping protein alpha-1 subunit, S-100 protein, ...
Authors:Inman, K.G, Yang, R, Rustandi, R.R, Miller, K.E, Baldisseri, D.M, Weber, D.J.
Deposit date:2002-09-30
Release date:2002-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR structure of S100B bound to the high-affinity target peptide TRTK-12
J.Mol.Biol., 324, 2002
8P0L
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BU of 8p0l by Molmil
Crystal structure of human O-GlcNAcase in complex with an S-linked CKII peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, Protein O-GlcNAcase, ...
Authors:Males, A, Davies, G.J, Calvelo, M, Alteen, M.G, Vocadlo, D.J, Rovira, C.
Deposit date:2023-05-10
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human O -GlcNAcase Uses a Preactivated Boat-skew Substrate Conformation for Catalysis. Evidence from X-ray Crystallography and QM/MM Metadynamics.
Acs Catalysis, 13, 2023
1PIV
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BU of 1piv by Molmil
BINDING OF THE ANTIVIRAL DRUG WIN51711 TO THE SABIN STRAIN OF TYPE 3 POLIOVIRUS: STRUCTURAL COMPARISON WITH DRUG BINDING IN RHINOVIRUS 14
Descriptor: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, MYRISTIC ACID, POLIOVIRUS TYPE 3 (SUBUNIT VP1), ...
Authors:Hiremath, C.N, Grant, R.A, Filman, D.J, Hogle, J.M.
Deposit date:1995-02-02
Release date:1995-06-03
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Binding of the antiviral drug WIN51711 to the sabin strain of type 3 poliovirus: structural comparison with drug binding in rhinovirus 14.
Acta Crystallogr.,Sect.D, 51, 1995
1BU3
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BU of 1bu3 by Molmil
REFINED CRYSTAL STRUCTURE OF CALCIUM-BOUND SILVER HAKE (PI 4.2) PARVALBUMIN AT 1.65 A.
Descriptor: CALCIUM ION, CALCIUM-BINDING PROTEIN
Authors:Richardson, R.C, Nelson, D.J, Royer, W.E, Harrington, D.J.
Deposit date:1998-08-30
Release date:1999-08-10
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-Ray crystal structure and molecular dynamics simulations of silver hake parvalbumin (Isoform B).
Protein Sci., 9, 2000
8J67
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BU of 8j67 by Molmil
Crystal structure of Toxoplasma gondii M2AP
Descriptor: MIC2-associated protein
Authors:Wang, F.F, Zhang, D.J, Zhang, S, Springer, T.A, Song, G.J.
Deposit date:2023-04-24
Release date:2023-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural insights into MIC2 recognition by MIC2-associated protein in Toxoplasma gondii.
Commun Biol, 6, 2023
8J64
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BU of 8j64 by Molmil
Crystal structure of Toxoplasma gondii MIC2-M2AP complex
Descriptor: MIC2-associated protein, Micronemal protein MIC2
Authors:Zhang, S, Wang, F.F, Zhang, D.J, Song, G.J, Springer, T.A.
Deposit date:2023-04-24
Release date:2023-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into MIC2 recognition by MIC2-associated protein in Toxoplasma gondii.
Commun Biol, 6, 2023
8OQ2
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BU of 8oq2 by Molmil
Binding of NADP to a formate dehydrogenase from Starkeya novella.
Descriptor: AZIDE ION, Formate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Partipilo, M, Whittaker, J.J, Pontillo, N, Guskov, A, Slotboom, D.J.
Deposit date:2023-04-10
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Binding of NADP to a formate dehydrogenase from Starkeya novella.
To Be Published
8OVV
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BU of 8ovv by Molmil
Tagless BtuM in complex with hydroxycobalamin
Descriptor: COBALAMIN, Cobalamin ABC transporter, nonyl beta-D-glucopyranoside
Authors:Martinez-Felices, J.M, Slotboom, D.J.
Deposit date:2023-04-26
Release date:2024-04-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure of the Thiobacillus denitrificans cobalamin transporter BtuM in complex with cyanocobalamin
To Be Published
1R9I
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BU of 1r9i by Molmil
NMR Solution Structure of PIIIA toxin, NMR, 20 structures
Descriptor: Mu-conotoxin PIIIA
Authors:Nielsen, K.J, Watson, M, Adams, D.J, Hammarstrom, A.K, Gage, P.W, Hill, J.M, Craik, D.J, Thomas, L, Adams, D, Alewood, P.F, Lewis, R.J.
Deposit date:2003-10-30
Release date:2003-11-18
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Solution structure of mu-conotoxin PIIIA, a preferential inhibitor of persistent tetrodotoxin-sensitive sodium channels
J.Biol.Chem., 277, 2002
1IEO
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BU of 1ieo by Molmil
SOLUTION STRUCTURE OF MRIB-NH2
Descriptor: PROTEIN MRIB-NH2
Authors:Sharpe, I.A, Gehrmann, J, Loughnan, M.L, Thomas, L, Adams, D.A, Atkins, A, Palant, E, Craik, D.J, Adams, D.J, Alewood, P.F, Lewis, R.J.
Deposit date:2001-04-10
Release date:2002-04-03
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Two new classes of conopeptides inhibit the alpha1-adrenoceptor and noradrenaline transporter.
Nat.Neurosci., 4, 2001
1OJW
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BU of 1ojw by Molmil
Decay accelerating factor (CD55): the structure of an intact human complement regulator.
Descriptor: COMPLEMENT DECAY-ACCELERATING FACTOR, GLYCEROL, SULFATE ION
Authors:Lukacik, P, Roversi, P, White, J, Esser, D, Smith, G.P, Billington, J, Williams, P.A, Rudd, P.M, Wormald, M.R, Crispin, M.D.M, Radcliffe, C.M, Dwek, C.M, Evans, D.J, Morgan, B.P, Smith, R.A.G, Lea, S.M.
Deposit date:2003-07-16
Release date:2004-01-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Complement Regulation at the Molecular Level: The Structure of Decay-Accelerating Factor
Proc.Natl.Acad.Sci.USA, 101, 2004
8OS2
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BU of 8os2 by Molmil
Structure of the human LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain in an unliganded state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Lymphatic vessel endothelial hyaluronic acid receptor 1
Authors:Ni, T, Bannerji, S, Jackson, D.J, Gilbert, R.J.C.
Deposit date:2023-04-17
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A novel sliding interaction with hyaluronan underlies the mode of action of LYVE-1, the receptor for leucocyte entry and trafficking in the lymphatics
To be published
1RMK
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BU of 1rmk by Molmil
Solution structure of conotoxin MrVIB
Descriptor: Mu-O-conotoxin MrVIB
Authors:Daly, N.L, Ekberg, J.A, Thomas, L, Adams, D.J, Lewis, R.J, Craik, D.J.
Deposit date:2003-11-28
Release date:2004-09-07
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structures of muO-conotoxins from Conus marmoreus. Inhibitors of tetrodotoxin (TTX)-sensitive and TTX-resistant sodium channels in mammalian sensory neurons
J.Biol.Chem., 279, 2004
4DFR
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BU of 4dfr by Molmil
CRYSTAL STRUCTURES OF ESCHERICHIA COLI AND LACTOBACILLUS CASEI DIHYDROFOLATE REDUCTASE REFINED AT 1.7 ANGSTROMS RESOLUTION. I. GENERAL FEATURES AND BINDING OF METHOTREXATE
Descriptor: CALCIUM ION, CHLORIDE ION, DIHYDROFOLATE REDUCTASE, ...
Authors:Filman, D.J, Matthews, D.A, Bolin, J.T, Kraut, J.
Deposit date:1982-06-25
Release date:1982-10-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 A resolution. I. General features and binding of methotrexate.
J.Biol.Chem., 257, 1982
4DC8
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BU of 4dc8 by Molmil
Crystal Structure of Myoglobin Unexposed to Excessive SONICC Imaging Laser Dose.
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Becker, M, Mulichak, A.M, Kissick, D.J, Fischetti, R.F, Keefe, L.J, Simpson, D.J.
Deposit date:2012-01-17
Release date:2013-01-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Towards protein-crystal centering using second-harmonic generation (SHG) microscopy.
Acta Crystallogr.,Sect.D, 69, 2013
1TLL
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BU of 1tll by Molmil
CRYSTAL STRUCTURE OF RAT NEURONAL NITRIC-OXIDE SYNTHASE REDUCTASE MODULE AT 2.3 A RESOLUTION.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Garcin, E.D, Bruns, C.M, Lloyd, S.J, Hosfield, D.J, Tiso, M, Gachhui, R, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2004-06-09
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for isozyme-specific regulation of electron transfer in nitric-oxide synthase
J.Biol.Chem., 279, 2004
2OYT
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BU of 2oyt by Molmil
Crystal Structure of UNG2/DNA(TM)
Descriptor: DNA strand1, DNA strand2, Uracil-DNA glycosylase
Authors:Bianchet, M.A, Krosky, D.J, Stivers, J.T, Amzel, L.M.
Deposit date:2007-02-22
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Enzymatic capture of an extrahelical thymine in the search for uracil in DNA.
Nature, 449, 2007
7QZ1
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BU of 7qz1 by Molmil
Formate dehydrogenase from Starkeya novella
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Pontillo, N, Slotboom, D.J, Guskov, A.
Deposit date:2022-01-30
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and structural insight into the chemical resistance and cofactor specificity of the formate dehydrogenase from Starkeya novella.
Febs J., 290, 2023
8PV0
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BU of 8pv0 by Molmil
Crystal structure of tropomyosin (Cdc8) cables, Conformers 2 and 3
Descriptor: Tropomyosin
Authors:Reinke, P.Y.A, Zahn, M, Fedorov, R, Manstein, D.J.
Deposit date:2023-07-17
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Atomic structure of tropomyosin cables
To Be Published
2PF5
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BU of 2pf5 by Molmil
Crystal Structure of the Human TSG-6 Link Module
Descriptor: NONAETHYLENE GLYCOL, SULFATE ION, Tumor necrosis factor-inducible protein TSG-6
Authors:Higman, V.A, Mahoney, D.J, Noble, M.E.M, Day, A.J.
Deposit date:2007-04-04
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Plasticity of the TSG-6 HA-binding loop and mobility in the TSG-6-HA complex revealed by NMR and X-ray crystallography
J.Mol.Biol., 371, 2007
8PUZ
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BU of 8puz by Molmil
Crystal structure of tropomyosin (Cdc8) cables, Conformer 1
Descriptor: Tropomyosin
Authors:Reinke, P.Y.A, Zahn, M, Fedorov, R, Manstein, D.J.
Deposit date:2023-07-17
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Atomic structure of cdc8 tropomyosin cables
To Be Published

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