Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1201 results

4HAN
DownloadVisualize
BU of 4han by Molmil
Crystal structure of Galectin 8 with NDP52 peptide
Descriptor: Calcium-binding and coiled-coil domain-containing protein 2, DI(HYDROXYETHYL)ETHER, Galectin-8, ...
Authors:Kim, B.-W, Hong, S.B, Kim, J.H, Kwon, D.H, Song, H.K.
Deposit date:2012-09-27
Release date:2013-03-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Structural basis for recognition of autophagic receptor NDP52 by the sugar receptor galectin-8.
Nat Commun, 4, 2013
2VBC
DownloadVisualize
BU of 2vbc by Molmil
Crystal structure of the NS3 protease-helicase from Dengue virus
Descriptor: DENGUE 4 NS3 FULL-LENGTH PROTEIN, PARTIAL POLYPROTEIN FOR NS2A AND NS2B, TYPE 4 PROTOTYPE DV4 H241
Authors:Luo, D.H, Xu, T, Hunke, C, Gruber, G, Vasudevan, S.G, Lescar, J.
Deposit date:2007-09-10
Release date:2007-10-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal Structure of the Ns3 Protease-Helicase from Dengue Virus.
J.Virol., 82, 2008
4GIQ
DownloadVisualize
BU of 4giq by Molmil
Crystal Structure of mouse RANK bound to RANKL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, SODIUM ION, ...
Authors:Nelson, C.A, Wang, M.W.-H, Fremont, D.H.
Deposit date:2012-08-08
Release date:2012-10-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:RANKL Employs Distinct Binding Modes to Engage RANK and the Osteoprotegerin Decoy Receptor.
Structure, 20, 2012
7EZM
DownloadVisualize
BU of 7ezm by Molmil
Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gq complex
Descriptor: Cholecystokinin receptor type A, Cholecystokinin-8, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Liu, Q.F, Yang, D.H, Zhuang, Y.W, Croll, T.I, Cai, X.Q, Duan, J, Dai, A.T, Yin, W.C, Ye, C.Y, Zhou, F.L, Wu, B.L, Zhao, Q, Xu, H.E, Wang, M.W, Jiang, Y.
Deposit date:2021-06-01
Release date:2021-08-25
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Ligand recognition and G-protein coupling selectivity of cholecystokinin A receptor
Nat.Chem.Biol., 17, 2021
7EZH
DownloadVisualize
BU of 7ezh by Molmil
Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gi complex
Descriptor: Cholecystokinin receptor type A, Cholecystokinin-8, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Liu, Q.F, Yang, D.H, Zhuang, Y.W, Croll, T.I, Cai, X.Q, Duan, J, Dai, A.T, Yin, W.C, Ye, C.Y, Zhou, F.L, Wu, B.L, Zhao, Q, Xu, H.E, Wang, M.W, Jiang, Y.
Deposit date:2021-06-01
Release date:2021-08-25
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Ligand recognition and G-protein coupling selectivity of cholecystokinin A receptor
Nat.Chem.Biol., 17, 2021
7EZK
DownloadVisualize
BU of 7ezk by Molmil
Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gs complex
Descriptor: Chimera of Guanine nucleotide-binding protein G(i) subunit alpha-1 and Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, Cholecystokinin receptor type A, Cholecystokinin-8, ...
Authors:Liu, Q.F, Yang, D.H, Zhuang, Y.W, Croll, T.I, Cai, X.Q, Duan, J, Dai, A.T, Yin, W.C, Ye, C.Y, Zhou, F.L, Wu, B.L, Zhao, Q, Xu, H.E, Wang, M.W, Jiang, Y.
Deposit date:2021-06-01
Release date:2021-08-25
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Ligand recognition and G-protein coupling selectivity of cholecystokinin A receptor
Nat.Chem.Biol., 17, 2021
4GQX
DownloadVisualize
BU of 4gqx by Molmil
Crystal structure of EIIA(NTR) from Burkholderia pseudomallei
Descriptor: PTS IIA-like nitrogen-regulatory protein PtsN
Authors:Kim, M.-S, Shin, D.H.
Deposit date:2012-08-24
Release date:2013-03-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:New molecular interaction of IIA(Ntr) and HPr from Burkholderia pseudomallei identified by X-ray crystallography and docking studies
Proteins, 81, 2013
4EMG
DownloadVisualize
BU of 4emg by Molmil
Crystal structure of SpLsm3
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012
2QRI
DownloadVisualize
BU of 2qri by Molmil
Crystal structure of a single chain trimer composed of the MHC I heavy chain H-2Kb WT, beta-2microglobulin, and ovalbumin-derived peptide.
Descriptor: H-2 class I histocompatibility antigen K-B alpha chain, Beta-2 microglobulin, ovalbumin-derived peptide
Authors:Mitaksov, V.E, Fremont, D.H.
Deposit date:2007-07-28
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural engineering of pMHC reagents for T cell vaccines and diagnostics.
Chem.Biol., 14, 2007
7EWJ
DownloadVisualize
BU of 7ewj by Molmil
Toxin-antitoxin complex from Staphylococcus aureus
Descriptor: Endoribonuclease MazF, GLYCEROL, PemI inhibitor, ...
Authors:Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
Deposit date:2021-05-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
7EWI
DownloadVisualize
BU of 7ewi by Molmil
Toxin protein from Staphylococcus aureus
Descriptor: Endoribonuclease MazF, GLYCEROL, PHOSPHATE ION
Authors:Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
Deposit date:2021-05-25
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
7FIN
DownloadVisualize
BU of 7fin by Molmil
Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GIPR-Gs complex
Descriptor: CHOLESTEROL, GAMMA-L-GLUTAMIC ACID, Gastric inhibitory polypeptide receptor,human glucose-dependent insulinotropic polypeptide receptor, ...
Authors:Zhao, F.h, Zhou, Q.T, Cong, Z.T, Hang, K.N, Zou, X.Y, Zhang, C, Chen, Y, Dai, A.T, Liang, A.Y, Ming, Q.Q, Wang, M, Chen, L.N, Xu, P.Y, Chang, R.L, Feng, W.B, Xia, T, Zhang, Y, Wu, B.L, Yang, D.H, Zhao, L.H, Xu, H.E, Wang, M.W.
Deposit date:2021-07-31
Release date:2022-02-23
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into multiplexed pharmacological actions of tirzepatide and peptide 20 at the GIP, GLP-1 or glucagon receptors.
Nat Commun, 13, 2022
7FIY
DownloadVisualize
BU of 7fiy by Molmil
Cryo-EM structure of the tirzepatide-bound human GIPR-Gs complex
Descriptor: CHOLESTEROL, Gastric inhibitory polypeptide receptor,Gastric inhibitory polypeptide receptor,human glucose-dependent insulinotropic polypeptide receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, F.H, Zhou, Q.T, Cong, Z.T, Hang, K.N, Zou, X.Y, Zhang, C, Chen, Y, Dai, A.T, Liang, A.Y, Ming, Q.Q, Wang, M, Chen, L.N, Xu, P.Y, Chang, R.L, Feng, W.B, Xia, T, Zhang, Y, Wu, B.L, Yang, D.H, Zhao, L.H, Xu, H.E, Wang, M.W.
Deposit date:2021-08-01
Release date:2022-03-02
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into multiplexed pharmacological actions of tirzepatide and peptide 20 at the GIP, GLP-1 or glucagon receptors.
Nat Commun, 13, 2022
7FIM
DownloadVisualize
BU of 7fim by Molmil
Cryo-EM structure of the tirzepatide (LY3298176)-bound human GLP-1R-Gs complex
Descriptor: Glucagon-like peptide 1 receptor,Glucagon-like peptide 1 receptor,Glucagon-like peptide 1 receptor,Glucagon-like peptide 1 receptor,human glucagon like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, F.H, Zhou, Q.T, Cong, Z.T, Hang, K.N, Zou, X.Y, Zhang, C, Chen, Y, Dai, A.T, Liang, A.Y, Ming, Q.Q, Wang, M, Chen, L.N, Xu, P.Y, Chang, R.L, Feng, W.B, Xia, T, Zhang, Y, Wu, B.L, Yang, D.H, Zhao, L.H, Xu, H.E, Wang, M.W.
Deposit date:2021-07-31
Release date:2022-03-02
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into multiplexed pharmacological actions of tirzepatide and peptide 20 at the GIP, GLP-1 or glucagon receptors.
Nat Commun, 13, 2022
2VAA
DownloadVisualize
BU of 2vaa by Molmil
MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
Descriptor: BETA-2 MICROGLOBULIN, MHC CLASS I H-2KB HEAVY CHAIN, VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
Authors:Fremont, D.H, Wilson, I.A.
Deposit date:1994-11-01
Release date:1996-06-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb.
Science, 257, 1992
4G59
DownloadVisualize
BU of 4g59 by Molmil
Crystal structure of the murine cytomegalovirus MHC-I homolog m152 with ligand RAE-1 gamma
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, M152 protein, Retinoic acid early-inducible protein 1-gamma
Authors:Wang, R, Natarajan, K, Margulies, D.H.
Deposit date:2012-07-17
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural basis of mouse cytomegalovirus m152/gp40 interaction with RAE1gamma reveals a paradigm for MHC/MHC interaction in immune evasion.
Proc.Natl.Acad.Sci.USA, 109, 2012
2QRS
DownloadVisualize
BU of 2qrs by Molmil
Crystal Structure of a single chain trimer composed of the MHC I heavy chain H-2Kb Y84A, beta-2microglobulin, and ovalbumin-derived peptide.
Descriptor: H-2 class I histocompatibility antigen K-B alpha chain, Beta-2 microglobulin, ovalbumin-derived peptide
Authors:Mitaksov, V.E, Fremont, D.H.
Deposit date:2007-07-29
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural engineering of pMHC reagents for T cell vaccines and diagnostics.
Chem.Biol., 14, 2007
7FEQ
DownloadVisualize
BU of 7feq by Molmil
Cryo-EM structure of apo BsClpP at pH 6.5
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FES
DownloadVisualize
BU of 7fes by Molmil
Cryo-EM structure of apo BsClpP at pH 4.2
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FER
DownloadVisualize
BU of 7fer by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
Descriptor: ADEP1, ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FEP
DownloadVisualize
BU of 7fep by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5
Descriptor: ADEP1, ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
4EMH
DownloadVisualize
BU of 4emh by Molmil
Crystal structure of SpLsm4
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm4
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012
4EJ0
DownloadVisualize
BU of 4ej0 by Molmil
Crystal structure of ADP-L-glycero-D-manno-heptose-6-epimerase from Burkholderia thailandensis
Descriptor: ADP-L-glycero-D-manno-heptose-6-epimerase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kim, M.S, Shin, D.H.
Deposit date:2012-04-06
Release date:2013-04-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:Structure and in silico substrate-binding mode of ADP-L-glycero-D-manno-heptose 6-epimerase from Burkholderia thailandensis.
Acta Crystallogr.,Sect.D, 69, 2013
2VVE
DownloadVisualize
BU of 2vve by Molmil
Crystal structure of the stem and receptor binding domain of the spike protein P1 from bacteriophage PM2
Descriptor: CALCIUM ION, CHLORIDE ION, SPIKE PROTEIN P1
Authors:Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
Deposit date:2008-06-06
Release date:2008-09-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
2VVF
DownloadVisualize
BU of 2vvf by Molmil
Crystal structure of the major capsid protein P2 from Bacteriophage PM2
Descriptor: CALCIUM ION, MAJOR CAPSID PROTEIN P2
Authors:Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
Deposit date:2008-06-06
Release date:2008-09-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon