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PDB: 1228 results

5CGN
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BU of 5cgn by Molmil
Structure of quasiracemic Ala-Magainin 2 with a beta amino acid substitution at position 8
Descriptor: CHLORIDE ION, D-Ala-Magainin Derivative, L-ACPC8-Ala-Magainin
Authors:Hayouka, Z, Thomas, N.C, Mortenson, D.E, Satyshur, K.A, Weisblum, B, Forest, K.T, Gellman, S.H.
Deposit date:2015-07-09
Release date:2015-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Quasiracemate Crystal Structures of Magainin 2 Derivatives Support the Functional Significance of the Phenylalanine Zipper Motif.
J.Am.Chem.Soc., 137, 2015
5CGO
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BU of 5cgo by Molmil
Structure of quasiracemic Ala-Magainin 2 with a beta amino acid substitution at position 13
Descriptor: ACPC-13 derivative of Ala-Magainin 2, D-Ala-Magainin 2
Authors:Hayouka, Z, Thomas, N.C, Mortenson, D.E, Satyshur, K.A, Weisblum, B, Forest, K.T, Gellman, S.H.
Deposit date:2015-07-09
Release date:2015-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Quasiracemate Crystal Structures of Magainin 2 Derivatives Support the Functional Significance of the Phenylalanine Zipper Motif.
J.Am.Chem.Soc., 137, 2015
5U7C
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BU of 5u7c by Molmil
Crystal structure of the lead-bound form of MerB formed from diethyllead.
Descriptor: ACETATE ION, Alkylmercury lyase, BROMIDE ION, ...
Authors:Wahba, H.M, Stevenson, M, Mansour, A, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2016-12-12
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage.
J. Am. Chem. Soc., 139, 2017
5U82
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BU of 5u82 by Molmil
Crystal structure of a MerB-triethyltin complex
Descriptor: ACETATE ION, Alkylmercury lyase, BROMIDE ION, ...
Authors:Wahba, H.M, Stevenson, M, Mansour, A, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2016-12-13
Release date:2017-01-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage.
J. Am. Chem. Soc., 139, 2017
5UI4
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BU of 5ui4 by Molmil
Structure of NME1 covalently conjugated to imidazole fluorosulfate
Descriptor: 4-[4-(3-methoxyphenyl)-1-(prop-2-yn-1-yl)-1H-imidazol-5-yl]phenyl sulfurofluoridate, Nucleoside diphosphate kinase A
Authors:Mortenson, D.E, Brighty, G.J, Wilson, I.A, Kelly, J.W.
Deposit date:2017-01-12
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:"Inverse Drug Discovery" Strategy To Identify Proteins That Are Targeted by Latent Electrophiles As Exemplified by Aryl Fluorosulfates.
J. Am. Chem. Soc., 140, 2018
5CRO
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BU of 5cro by Molmil
REFINED STRUCTURE OF CRO REPRESSOR PROTEIN FROM BACTERIOPHAGE LAMBDA
Descriptor: CRO REPRESSOR PROTEIN, PHOSPHATE ION
Authors:Ohlendorf, D.H, Tronrud, D.E, Matthews, B.W.
Deposit date:1998-04-17
Release date:1998-06-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refined structure of Cro repressor protein from bacteriophage lambda suggests both flexibility and plasticity.
J.Mol.Biol., 280, 1998
5UT3
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BU of 5ut3 by Molmil
JAK2 JH2 in complex with IKK-2 Inhibitor VI
Descriptor: 5-PHENYL-2-UREIDOTHIOPHENE-3-CARBOXAMIDE, ACETATE ION, GLYCEROL, ...
Authors:Puleo, D.E, Schlessinger, J.
Deposit date:2017-02-14
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Identification and Characterization of JAK2 Pseudokinase Domain Small Molecule Binders.
ACS Med Chem Lett, 8, 2017
5DSF
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BU of 5dsf by Molmil
Crystal structure of the mercury-bound form of MerB mutant D99S
Descriptor: Alkylmercury lyase, BROMIDE ION, MERCURY (II) ION
Authors:Wahba, H.M, Lecoq, L, Stevenson, M, Mansour, A, Cappadocia, L, Lafrance-Vanasse, J, Wilkinson, K.J, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2015-09-17
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity.
Biochemistry, 55, 2016
5DW7
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BU of 5dw7 by Molmil
Crystal structure of the unliganded geosmin synthase N-terminal domain from Streptomyces coelicolor
Descriptor: Germacradienol/geosmin synthase
Authors:Lombardi, P.M, Harris, G.G, Pemberton, T.A, Matsui, T, Weiss, T.M, Cole, K.E, Koksal, M, Murphy, F.V, Vedula, L.S, Chou, W.K, Cane, D.E, Christianson, D.W.
Deposit date:2015-09-22
Release date:2015-11-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with alpha alpha Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence.
Biochemistry, 54, 2015
5ED0
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BU of 5ed0 by Molmil
Structure of the Shigella flexneri VapC mutant D7N
Descriptor: tRNA(fMet)-specific endonuclease VapC
Authors:Xu, K, Dedic, E, Brodersen, D.E.
Deposit date:2015-10-20
Release date:2016-02-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri.
Proteins, 84, 2016
5DZ2
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BU of 5dz2 by Molmil
Geosmin synthase from Streptomyces coelicolor N-terminal domain complexed with three Mg2+ ions and alendronic acid
Descriptor: ALENDRONATE, Germacradienol/geosmin synthase, MAGNESIUM ION
Authors:Harris, G.G, Lombardi, P.M, Pemberton, T.A, Matsui, T, Weiss, T.M, Cole, K.E, Koksal, M, Murphy, F.V, Vedula, L.S, Chou, W.K.W, Cane, D.E, Christianson, D.W.
Deposit date:2015-09-25
Release date:2015-12-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.111 Å)
Cite:Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with alpha alpha Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence.
Biochemistry, 54, 2015
5ECY
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BU of 5ecy by Molmil
Structure of the Shigella flexneri VapC mutant D98N crystal form 2
Descriptor: tRNA(fMet)-specific endonuclease VapC
Authors:Xu, K, Dedic, E, Brodersen, D.E.
Deposit date:2015-10-20
Release date:2016-10-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis on the active site architecture of an activated VapC toxin from Shigella flexneri
to be published
5D84
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BU of 5d84 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnA bound to PLP
Descriptor: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, Probable siderophore biosynthesis protein SbnA
Authors:Grigg, J.C, Kobylarz, M.J, Liu, Y, Lee, M.S.F, Heinrichs, D.E, Murphy, M.E.P.
Deposit date:2015-08-15
Release date:2016-02-03
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis.
Biochemistry, 55, 2016
5TZL
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BU of 5tzl by Molmil
Structure of transthyretin in complex with the kinetic stabilizer 201
Descriptor: 4-(7-chloro-1,3-benzoxazol-2-yl)-2,6-diiodophenol, Transthyretin
Authors:Connelly, S, Mortenson, D.E, Choi, S, Wilson, I.A, Powers, E.T, Kelly, J.W, Johnson, S.M.
Deposit date:2016-11-21
Release date:2017-06-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Semi-quantitative models for identifying potent and selective transthyretin amyloidogenesis inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
5U88
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BU of 5u88 by Molmil
Crystal structure of a MerB-triimethyllead complex.
Descriptor: ACETATE ION, Alkylmercury lyase, Trimethyllead bromide
Authors:Wahba, H.M, Stevenson, M, Mansour, A, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2016-12-14
Release date:2017-01-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage.
J. Am. Chem. Soc., 139, 2017
5U7B
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BU of 5u7b by Molmil
Crystal structure of a the tin-bound form of MerB formed from Diethyltin.
Descriptor: ACETATE ION, Alkylmercury lyase, BROMIDE ION, ...
Authors:Wahba, H.M, Stevenson, M, Mansour, A, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2016-12-12
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage.
J. Am. Chem. Soc., 139, 2017
5ECW
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BU of 5ecw by Molmil
Structure of the Shigella flexneri VapC mutant D7A
Descriptor: tRNA(fMet)-specific endonuclease VapC
Authors:Xu, K, Dedic, E, Brodersen, D.E.
Deposit date:2015-10-20
Release date:2016-02-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri.
Proteins, 84, 2016
5U79
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BU of 5u79 by Molmil
Crystal structure of a complex formed between MerB and Dimethyltin
Descriptor: ACETATE ION, Alkylmercury lyase, BROMIDE ION, ...
Authors:Wahba, H.M, Stevenson, M, Mansour, A, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2016-12-12
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.604 Å)
Cite:Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage.
J. Am. Chem. Soc., 139, 2017
5D87
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BU of 5d87 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnA Y152F/S185G variant
Descriptor: MAGNESIUM ION, POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Kobylarz, M.J, Grigg, J.C, Liu, Y, Lee, M.S.F, Heinrichs, D.E, Murphy, M.E.P.
Deposit date:2015-08-15
Release date:2016-02-03
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis.
Biochemistry, 55, 2016
5UT1
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BU of 5ut1 by Molmil
JAK2 JH2 in complex with BI-D1870
Descriptor: (7S)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-5,7-dimethyl-8-(3-methylbutyl)-7,8-dihydropteridin-6(5H)-one, GLYCEROL, Tyrosine-protein kinase JAK2
Authors:Puleo, D.E, Schlessinger, J.
Deposit date:2017-02-14
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Identification and Characterization of JAK2 Pseudokinase Domain Small Molecule Binders.
ACS Med Chem Lett, 8, 2017
5UT6
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BU of 5ut6 by Molmil
JAK2 JH2 in complex with a diaminopyrimidine
Descriptor: 4-({4-amino-6-[3-(hydroxymethyl)-1H-pyrazol-1-yl]pyrimidin-2-yl}amino)benzonitrile, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Puleo, D.E, Schlessinger, J.
Deposit date:2017-02-14
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.645 Å)
Cite:JAK2 JH2 Fluorescence Polarization Assay and Crystal Structures for Complexes with Three Small Molecules.
ACS Med Chem Lett, 8, 2017
5USZ
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BU of 5usz by Molmil
JAK2 JH2 in complex with JNJ-7706621
Descriptor: 4-({5-amino-1-[(2,6-difluorophenyl)carbonyl]-1H-1,2,4-triazol-3-yl}amino)benzenesulfonamide, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Puleo, D.E, Schlessinger, J.
Deposit date:2017-02-14
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Identification and Characterization of JAK2 Pseudokinase Domain Small Molecule Binders.
ACS Med Chem Lett, 8, 2017
5UT4
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BU of 5ut4 by Molmil
JAK2 JH2 in complex with NVP-BSK805
Descriptor: 8-[3,5-difluoro-4-(morpholin-4-ylmethyl)phenyl]-2-(1-piperidin-4-yl-1H-pyrazol-4-yl)quinoxaline, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Puleo, D.E, Schlessinger, J.
Deposit date:2017-02-14
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:JAK2 JH2 Fluorescence Polarization Assay and Crystal Structures for Complexes with Three Small Molecules.
ACS Med Chem Lett, 8, 2017
5D85
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BU of 5d85 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnA bound to aminoacrylate intermediate
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, CITRATE ANION, GLYCEROL, ...
Authors:Kobylarz, M.J, Grigg, J.C, Liu, Y, Lee, M.S.F, Heinrichs, D.E, Murphy, M.E.P.
Deposit date:2015-08-15
Release date:2016-02-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis.
Biochemistry, 55, 2016
5UT2
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BU of 5ut2 by Molmil
JAK2 JH2 in complex with PRT062607
Descriptor: 2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-{[3-(2H-1,2,3-triazol-2-yl)phenyl]amino}pyrimidine-5-carboxamide, ACETATE ION, GLYCEROL, ...
Authors:Puleo, D.E, Schlessinger, J.
Deposit date:2017-02-14
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Identification and Characterization of JAK2 Pseudokinase Domain Small Molecule Binders.
ACS Med Chem Lett, 8, 2017

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