Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22297 results

8CTU
DownloadVisualize
BU of 8ctu by Molmil
Crystal structure of a K+ selective NaK mutant (NaK2K) at Room temperature
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
7AAB
DownloadVisualize
BU of 7aab by Molmil
Crystal structure of the catalytic domain of human PARP1 in complex with inhibitor EB-47
Descriptor: 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide, Poly [ADP-ribose] polymerase 1, SULFATE ION
Authors:Schimpl, M, Ogden, T.E.H, Yang, J.-C, Easton, L.E, Underwood, E, Rawlins, P.B, Johannes, J.W, Embrey, K.J, Neuhaus, D.
Deposit date:2020-09-04
Release date:2021-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dynamics of the HD regulatory subdomain of PARP-1; substrate access and allostery in PARP activation and inhibition.
Nucleic Acids Res., 49, 2021
8D78
DownloadVisualize
BU of 8d78 by Molmil
Crystal structure of a Ba stabilized four-tetrad, parallel Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
Descriptor: BARIUM ION, DNA (5'-D(*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN
Authors:Chen, E.V, Beseiso, D, Yatsunyk, L.A.
Deposit date:2022-06-07
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published
5NAP
DownloadVisualize
BU of 5nap by Molmil
Torpedo californica acetylcholinesterase in complex with a non-chiral donepezil-like inhibitor 17
Descriptor: (2~{E})-5,6-dimethoxy-2-[[1-(phenylmethyl)piperidin-4-yl]methylidene]-3~{H}-inden-1-one, Acetylcholinesterase, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Caliandro, R, Pesaresi, A, Lamba, D.
Deposit date:2017-02-28
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Kinetic and structural studies on the interactions of Torpedo californica acetylcholinesterase with two donepezil-like rigid analogues.
J Enzyme Inhib Med Chem, 33, 2018
7ACA
DownloadVisualize
BU of 7aca by Molmil
CRYSTAL STRUCTURE OF AN ACTIVE KRAS G12D (GPPCP) DIMER IN COMPLEX WITH BI-5747
Descriptor: (3~{S})-5-oxidanyl-3-[2-[[6-[[3-[(1~{S})-6-oxidanyl-3-oxidanylidene-1,2-dihydroisoindol-1-yl]-1~{H}-indol-2-yl]methylamino]hexylamino]methyl]-1~{H}-indol-3-yl]-2,3-dihydroisoindol-1-one, 1,2-ETHANEDIOL, GTPase KRas, ...
Authors:Kessler, D.
Deposit date:2020-09-10
Release date:2020-11-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:CRYSTAL STRUCTURE OF AN ACTIVE KRAS G12D (GPPCP) DIMER IN COMPLEX WITH BI-5747
To Be Published
7A4V
DownloadVisualize
BU of 7a4v by Molmil
Crystal structure of lid-truncated ADP-bound BiP in an oligomeric state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Endoplasmic reticulum chaperone BiP, GLYCEROL, ...
Authors:Perera, L.A, Ron, D.
Deposit date:2020-08-20
Release date:2020-12-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Calcium depletion challenges endoplasmic reticulum proteostasis by destabilising BiP-substrate complexes.
Elife, 9, 2020
5NA4
DownloadVisualize
BU of 5na4 by Molmil
NADH:quinone oxidoreductase (NDH-II) from Staphylococcus aureus - E172S mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH dehydrogenase-like protein SAOUHSC_00878
Authors:Brito, J.A, Athayde, D, Sousa, F.M, Sena, F.V, Pereira, M.M, Archer, M.
Deposit date:2017-02-27
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The key role of glutamate 172 in the mechanism of type II NADH:quinone oxidoreductase of Staphylococcus aureus.
Biochim. Biophys. Acta, 1858, 2017
8DE3
DownloadVisualize
BU of 8de3 by Molmil
Native serotonin transporter in complex with 15B8 Fab antibody in the presence of cocaine
Descriptor: 15B8 Fab heavy chain variable domain, 15B8 Fab light chain variable domain, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, D, Gouaux, E.
Deposit date:2022-06-19
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Native serotonin transporter in complex with 15B8 Fab antibody in the presence of cocaine
To Be Published
8D79
DownloadVisualize
BU of 8d79 by Molmil
Crystal structure of a four-tetrad, parallel, and Na+ stabilized Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*T)-3'), N-METHYLMESOPORPHYRIN, ...
Authors:Chen, E.V, Beseiso, D, Yatsunyk, L.A.
Deposit date:2022-06-07
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published
5NBY
DownloadVisualize
BU of 5nby by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, FLAVIN MONONUCLEOTIDE
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2017-03-02
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
3UIP
DownloadVisualize
BU of 3uip by Molmil
Complex between human RanGAP1-SUMO1, UBC9 and the IR1 domain from RanBP2 containing IR2 Motif II
Descriptor: E3 SUMO-protein ligase RanBP2, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
Authors:Gareau, J.R, Reverter, D, Lima, C.D.
Deposit date:2011-11-05
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Determinants of small ubiquitin-like modifier 1 (SUMO1) protein specificity, E3 ligase, and SUMO-RanGAP1 binding activities of nucleoporin RanBP2.
J.Biol.Chem., 287, 2012
8CU1
DownloadVisualize
BU of 8cu1 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 500ns, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
5NRG
DownloadVisualize
BU of 5nrg by Molmil
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S ribosomal RNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Yonath, A, Matzov, D, Eyal, Z, Ben Hamou, R, Zimmerman, E, Rozenberg, H, Bashan, A, Fridman, M.
Deposit date:2017-04-23
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.442 Å)
Cite:Structural insights of lincosamides targeting the ribosome of Staphylococcus aureus.
Nucleic Acids Res., 45, 2017
8CU3
DownloadVisualize
BU of 8cu3 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 200ns, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
7BUP
DownloadVisualize
BU of 7bup by Molmil
Crystal structure of PCNA from pathogenic yeast Candida albicans
Descriptor: Proliferating cell nuclear antigen
Authors:sundaram, R, Vasudevan, D.
Deposit date:2020-04-07
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analyses of PCNA from the fungal pathogen Candida albicans identify three regions with species-specific conformations.
Febs Lett., 595, 2021
8CU2
DownloadVisualize
BU of 8cu2 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 100ns, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CU4
DownloadVisualize
BU of 8cu4 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 1us, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
7BCM
DownloadVisualize
BU of 7bcm by Molmil
The DDR1 Kinase Domain Bound To SR302
Descriptor: Epithelial discoidin domain-containing receptor 1, ~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-[[(3~{S})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]imidazo[1,2-a]pyridine-3-carboxamide
Authors:Mathea, S, Chatterjee, D, Preuss, F, Roehm, S, Joerger, A, Knapp, S.
Deposit date:2020-12-20
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe.
J.Med.Chem., 64, 2021
7BDZ
DownloadVisualize
BU of 7bdz by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (1)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
Authors:Loreto, D, Merlino, A, Ferraro, G.
Deposit date:2020-12-22
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BEC
DownloadVisualize
BU of 7bec by Molmil
Unusual structural features in the adduct of dirhodium tetraacetate with lysozyme (5)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
Authors:Loreto, D, Ferraro, G, Merlino, A.
Deposit date:2020-12-23
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BEB
DownloadVisualize
BU of 7beb by Molmil
Unusual structural features in the adduct of dirhodium tetraacetate with lysozyme (4)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
Authors:Loreto, D, Ferraro, G, Merlino, A.
Deposit date:2020-12-23
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BE2
DownloadVisualize
BU of 7be2 by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (6)
Descriptor: ACETATE ION, GLYCEROL, Lysozyme, ...
Authors:Loreto, D, Merlino, A, Ferraro, G.
Deposit date:2020-12-22
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BE1
DownloadVisualize
BU of 7be1 by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (3)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
Authors:Loreto, D, Merlino, A, Ferraro, G.
Deposit date:2020-12-22
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BE0
DownloadVisualize
BU of 7be0 by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (2)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
Authors:Loreto, D, Merlino, A, Ferraro, G.
Deposit date:2020-12-22
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
8CRD
DownloadVisualize
BU of 8crd by Molmil
Aspergillus niger ferulic acid decarboxylase (Fdc) T40C-S315C (DB1) variant in complex with prenylated flavin hydroxylated at the C1 prime position
Descriptor: Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Roberts, G.W, Leys, D.
Deposit date:2023-03-08
Release date:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Aspergillus niger ferulic acid decarboxylase (Fdc) T40C-S315C (DB1) variant in complex with prenylated flavin hydroxylated at the C1 prime position
To Be Published

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon