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PDB: 22297 results

3OEH
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Structure of four mutant forms of yeast F1 ATPase: beta-V279F
Descriptor: ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit delta, ...
Authors:Arsenieva, D, Symersky, J, Wang, Y, Pagadala, V, Mueller, D.M.
Deposit date:2010-08-12
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of mutant forms of the yeast f1 ATPase reveal two modes of uncoupling.
J.Biol.Chem., 285, 2010
1OXC
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LecB (PA-LII) in complex with FUCOSE
Descriptor: CALCIUM ION, SULFATE ION, alpha-L-fucopyranose, ...
Authors:Loris, R, Tielker, D, Jaeger, K.-E, Wyns, L.
Deposit date:2003-04-02
Release date:2003-09-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Basis of Carbohydrate Recognition by the Lectin LecB from Pseudomonas aeruginosa
J.MOL.BIOL., 331, 2003
1OWT
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BU of 1owt by Molmil
Structure of the Alzheimer's disease amyloid precursor protein copper binding domain
Descriptor: Amyloid beta A4 protein
Authors:Barnham, K.J, McKinstry, W.J, Multhaup, G, Galatis, D, Morton, C.J, Curtain, C.C, Williamson, N.A, White, A.R, Hinds, M.G, Norton, R.S, Beyreuther, K, Masters, C.L, Parker, M.W, Cappai, R.
Deposit date:2003-03-30
Release date:2003-05-13
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of the Alzheimer's Disease Amyloid Precursor Protein Copper Binding Domain. A REGULATOR OF NEURONAL COPPER HOMEOSTASIS.
J.Biol.Chem., 278, 2003
2X31
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BU of 2x31 by Molmil
Modelling of the complex between subunits BchI and BchD of magnesium chelatase based on single-particle cryo-EM reconstruction at 7.5 ang
Descriptor: MAGNESIUM-CHELATASE 38 KDA SUBUNIT, MAGNESIUM-CHELATASE 60 KDA SUBUNIT
Authors:Lunqvist, J, Elmlund, H, Peterson Wulff, R, Berglund, L, Elmlund, D, Emanuelsson, C, Hebert, H, Willows, R.D, Hansson, M, Lindahl, M, Al-Karadaghi, S.
Deposit date:2010-01-19
Release date:2010-11-10
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:ATP-Induced Conformational Dynamics in the Aaa+ Motor Unit of Magnesium Chelatase.
Structure, 18, 2010
2WIS
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BU of 2wis by Molmil
Fluorescent protein KillerRed in the bleached state
Descriptor: KILLERRED, SODIUM ION
Authors:Carpentier, P, Violot, S, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-15
Release date:2009-08-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis for the Phototoxicity of the Fluorescent Protein Killerred.
FEBS Lett., 583, 2009
3NUV
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BU of 3nuv by Molmil
Crystal structure of ketosteroid isomerase D38ND99N from Pseudomonas testosteroni (tKSI) with 4-Androstene-3,17-dione Bound
Descriptor: 4-ANDROSTENE-3-17-DIONE, SULFATE ION, Steroid Delta-isomerase
Authors:Gonzalez, A, Tsai, Y, Schwans, J, Sunden, F, Herschlag, D.
Deposit date:2010-07-07
Release date:2011-11-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal Structure of Ketosteroid Isomerase D38ND99N from Pseudomonas testosteroni (tKSI) with 4-Androstene-3,17-dione Bound
TO BE PUBLISHED
3NVJ
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Crystal structure of the C143A/C166A mutant of Ero1p
Descriptor: 1-ETHYL-PYRROLIDINE-2,5-DIONE, CADMIUM ION, Endoplasmic oxidoreductin-1, ...
Authors:Fass, D, Vonshak, O.
Deposit date:2010-07-08
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Steps in reductive activation of the disulfide-generating enzyme Ero1p
Protein Sci., 19, 2010
8Q5N
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Apo form of restriction endonuclease NhoI.
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Restriction endonuclease (NhoI)
Authors:Rafalski, D, Krakowska, A, Bochtler, M.
Deposit date:2023-08-09
Release date:2024-07-17
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural analysis of the BisI family of modification dependent restriction endonucleases.
Nucleic Acids Res., 2024
1PJ6
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BU of 1pj6 by Molmil
Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with folic acid
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FOLIC ACID, N,N-dimethylglycine oxidase, ...
Authors:Leys, D, Basran, J, Scrutton, N.S.
Deposit date:2003-06-01
Release date:2003-10-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Channelling and formation of 'active' formaldehyde in dimethylglycine oxidase.
Embo J., 22, 2003
3O00
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BU of 3o00 by Molmil
Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD-C244S
Descriptor: Cell invasion protein sipD, NICKEL (II) ION
Authors:Chatterjee, S, Zhong, D, Nordhues, B.A, Battaile, K.P, Lovell, S, DeGuzman, R.N.
Deposit date:2010-07-18
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The crystal structures of the Salmonella type III secretion system tip protein SipD in complex with deoxycholate and chenodeoxycholate.
Protein Sci., 20, 2011
8Q5O
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N-terminal domain of restriction endonuclease Eco15I with tetra-methylated target DNA.
Descriptor: CALCIUM ION, DNA (5'-D(*CP*TP*GP*(5CM)P*TP*GP*(5CM)P*TP*C)-3'), DNA (5'-D(*GP*AP*GP*(5CM)P*AP*GP*(5CM)P*AP*G)-3'), ...
Authors:Rafalski, D, Krakowska, K, Bochtler, M.
Deposit date:2023-08-09
Release date:2024-07-17
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural analysis of the BisI family of modification dependent restriction endonucleases.
Nucleic Acids Res., 2024
2W8F
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BU of 2w8f by Molmil
Aplysia californica AChBP bound to in silico compound 31
Descriptor: (3-EXO)-3-(10,11-DIHYDRO-5H-DIBENZO[A,D][7]ANNULEN-5-YLOXY)-8,8-DIMETHYL-8-AZONIABICYCLO[3.2.1]OCTANE, SOLUBLE ACETYLCHOLINE RECEPTOR
Authors:Ulens, C, Akdemir, A, Jongejan, A, van Elk, R, Edink, E, Bertrand, S, Perrakis, A, Leurs, R, Smit, A.B, Sixma, T.K, Bertrand, D, de Esch, I.J.
Deposit date:2009-01-16
Release date:2009-04-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Use of Acetylcholine Binding Protein in the Search for Novel Alpha7 Nicotinic Receptor Ligands. In Silico Docking, Pharmacological Screening, and X- Ray Analysis.
J.Med.Chem., 52, 2009
8Q5M
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BU of 8q5m by Molmil
N-terminal domain of restriction endonuclease Eco15I in the absence of DNA.
Descriptor: Restriction endonuclease (Eco15I)
Authors:Rafalski, D, Krakowska, K, Bochtler, M.
Deposit date:2023-08-09
Release date:2024-07-17
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural analysis of the BisI family of modification dependent restriction endonucleases.
Nucleic Acids Res., 2024
8PVR
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BU of 8pvr by Molmil
Cryo-EM structure of horse Nhe9 bound to PI(3,5)P2
Descriptor: (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoate, Sodium/hydrogen exchanger 9
Authors:Kokane, S, Meier, P, Gulati, A, Delemotte, L, Drew, D.
Deposit date:2023-07-18
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:PIP2 mediated oligomerization of the endosomal sodium/proton exchanger NHE9
To Be Published
1PIP
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BU of 1pip by Molmil
CRYSTAL STRUCTURE OF PAPAIN-SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE COMPLEX AT 1.7 ANGSTROMS RESOLUTION: NONCOVALENT BINDING MODE OF A COMMON SEQUENCE OF ENDOGENOUS THIOL PROTEASE INHIBITORS
Descriptor: Papain, SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE
Authors:Yamamoto, A, Tomoo, K, Doi, M, Ohishi, H, Inoue, M, Ishida, T, Yamamoto, D, Tsuboi, S, Okamoto, H, Okada, Y.
Deposit date:1992-10-03
Release date:1993-10-31
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of papain-succinyl-Gln-Val-Val-Ala-Ala-p-nitroanilide complex at 1.7-A resolution: noncovalent binding mode of a common sequence of endogenous thiol protease inhibitors.
Biochemistry, 31, 1992
2W02
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BU of 2w02 by Molmil
Co-complex Structure of Achromobactin Synthetase Protein D (AcsD) with ATP from Pectobacterium Chrysanthemi
Descriptor: ACSD, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Schmelz, S, McMahon, S.A, Kadi, N, Song, L, Oves-Costales, D, Oke, M, Liu, H, Johnson, K.A, Carter, L, White, M.F, Challis, G.L, Naismith, J.H.
Deposit date:2008-08-08
Release date:2009-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:AcsD catalyzes enantioselective citrate desymmetrization in siderophore biosynthesis.
Nat. Chem. Biol., 5, 2009
3NNF
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BU of 3nnf by Molmil
Halogenase domain from CurA module with Fe, chloride, and alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, CurA, ...
Authors:Khare, D, Smith, J.L.
Deposit date:2010-06-23
Release date:2010-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Conformational switch triggered by alpha-ketoglutarate in a halogenase of curacin A biosynthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
4EAJ
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BU of 4eaj by Molmil
Co-crystal of AMPK core with AMP soaked with ATP
Descriptor: 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-2, 5'-AMP-activated protein kinase subunit gamma-1, ...
Authors:Chen, L, Wang, J, Zhang, Y.-Y, Yan, S.F, Neumann, D, Schlattner, U, Wang, Z.-X, Wu, J.-W.
Deposit date:2012-03-22
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:AMP-activated protein kinase undergoes nucleotide-dependent conformational changes
Nat.Struct.Mol.Biol., 19, 2012
2W1D
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BU of 2w1d by Molmil
Structure determination of Aurora Kinase in complex with inhibitor
Descriptor: 2-(1H-pyrazol-3-yl)-1H-benzimidazole, SERINE/THREONINE-PROTEIN KINASE 6
Authors:Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
Deposit date:2008-10-17
Release date:2009-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
1PBR
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BU of 1pbr by Molmil
STRUCTURE OF 16S RIBOSOMAL RNA, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: 16S RIBOSOMAL RNA, 2,6-diamino-2,6-dideoxy-beta-L-idopyranose-(1-3)-beta-D-ribofuranose, 2-DEOXYSTREPTAMINE, ...
Authors:Fourmy, D, Recht, M.I, Blanchard, S, Puglisi, J.D.
Deposit date:1996-09-12
Release date:1997-09-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic.
Science, 274, 1996
2W6L
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BU of 2w6l by Molmil
The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway
Descriptor: COBE, GLYCEROL, SULFATE ION
Authors:Vevodova, J, Smith, D, McGoldrick, H, Deery, E, Murzin, A.G, Warren, M.J, Wilson, K.S.
Deposit date:2008-12-18
Release date:2008-12-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The Crystal Structure at 1.7 A Resolution of Cobe, a Protein from the Cobalamin (Vitamin B12) Biosynthetic Pathway
To be Published
2W5Q
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BU of 2w5q by Molmil
Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, PROCESSED GLYCEROL PHOSPHATE LIPOTEICHOIC ACID SYNTHASE
Authors:Lu, D, Wormann, M.E, Zhang, X, Scheewind, O, Grundling, A, Freemont, P.S.
Deposit date:2008-12-11
Release date:2009-02-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas.
Proc.Natl.Acad.Sci.USA, 106, 2009
8PXB
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BU of 8pxb by Molmil
Cryo-EM structure of horse NHE9 with a extracellular loop
Descriptor: Sodium/hydrogen exchanger 9
Authors:Kokane, S, Meier, P, Matsuoka, R, Drew, D.
Deposit date:2023-07-23
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:PIP2 mediated oligomerization of the endosomal sodium/proton exchanger NHE9
To Be Published
2W1H
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BU of 2w1h by Molmil
Fragment-Based Discovery of the Pyrazol-4-yl urea (AT9283), a Multi- targeted Kinase Inhibitor with Potent Aurora Kinase Activity
Descriptor: CELL DIVISION PROTEIN KINASE 2, N-[3-(1H-BENZIMIDAZOL-2-YL)-1H-PYRAZOL-4-YL]BENZAMIDE
Authors:Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
Deposit date:2008-10-17
Release date:2009-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
1PEY
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BU of 1pey by Molmil
Crystal structure of the Response Regulator Spo0F complexed with Mn2+
Descriptor: MANGANESE (II) ION, Sporulation initiation phosphotransferase F
Authors:Mukhopadhyay, D, Sen, U, Zapf, J, Varughese, K.I.
Deposit date:2003-05-22
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Metals in the sporulation phosphorelay: manganese binding by the response regulator Spo0F.
Acta Crystallogr.,Sect.D, 60, 2004

223790

數據於2024-08-14公開中

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