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PDB: 22202 results

7UVI
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BU of 7uvi by Molmil
Pfs230 domain 1 bound by RUPA-55 Fab
Descriptor: Gametocyte surface protein P230, RUPA-55 Fab heavy chain, RUPA-55 Fab light chain
Authors:Ivanochko, D, Newton, J, Julien, J.P.
Deposit date:2022-05-02
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Potent transmission-blocking monoclonal antibodies from naturally exposed individuals target a conserved epitope on Plasmodium falciparum Pfs230.
Immunity, 56, 2023
3SGS
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BU of 3sgs by Molmil
Amyloid-related segment of alphaB-crystallin residues 95-100
Descriptor: Alpha-crystallin B chain
Authors:Laganowsky, A, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2011-06-15
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Atomic view of a toxic amyloid small oligomer.
Science, 335, 2012
6QMN
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BU of 6qmn by Molmil
Crystal structure of a Ribonuclease A-Onconase chimera
Descriptor: PHOSPHATE ION, Ribonuclease pancreatic
Authors:Esposito, L, Vitagliano, L, Ruggiero, A, Picone, D, Leone, S, Donnarumma, F.
Deposit date:2019-02-07
Release date:2019-05-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure, stability and aggregation propensity of a Ribonuclease A-Onconase chimera.
Int.J.Biol.Macromol., 133, 2019
4TWC
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BU of 4twc by Molmil
2-Benzamido-N-(1H-benzo[d]imidazol-2-yl)thiazole-4- carboxamide derivatives as potent inhibitors of CK1d/e
Descriptor: 2-{[2-(trifluoromethoxy)benzoyl]amino}-N-[6-(trifluoromethyl)-1H-benzimidazol-2-yl]-1,3-thiazole-4-carboxamide, Casein kinase I isoform delta, DIMETHYL SULFOXIDE, ...
Authors:Bischof, J, Leban, L, Zaja, M, Grothey, A, Radunsky, B, Othersen, O, Strobl, S, Vitt, D, Knippschild, U.
Deposit date:2014-06-30
Release date:2014-10-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:2-Benzamido-N-(1H-benzo[d]imidazol-2-yl)thiazole-4-carboxamide derivatives as potent inhibitors of CK1d/e.
Amino Acids, 43, 2012
4TWK
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BU of 4twk by Molmil
Crystal structure of human two pore domain potassium ion channel TREK1 (K2P2.1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Octyl Glucose Neopentyl Glycol, ...
Authors:Pike, A.C.W, Dong, Y.Y, Tessitore, A, Goubin, S, Strain-Damerell, C, Mukhopadhyay, S, Kupinska, K, Wang, D, Chalk, R, Berridge, G, Grieben, M, Shrestha, L, Ang, J.H, Mackenzie, A, Quigley, A, Bushell, S.R, Shintre, C.A, Faust, B, Chu, A, Dong, L, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Burgess-Brown, N.A, Carpenter, E.P.
Deposit date:2014-06-30
Release date:2014-08-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human two pore domain potassium ion channel TREK1 (K2P2.1)
To Be Published
7UVS
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BU of 7uvs by Molmil
Pfs230 domain 1 bound by LMIV230-02 Fab
Descriptor: Gametocyte surface protein P230, LMIV230-02 Fab heavy chain, LMIV230-02 Fab light chain, ...
Authors:Ivanochko, D, Julien, J.P.
Deposit date:2022-05-02
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Potent transmission-blocking monoclonal antibodies from naturally exposed individuals target a conserved epitope on Plasmodium falciparum Pfs230.
Immunity, 56, 2023
7UW2
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BU of 7uw2 by Molmil
Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB116 and coactivator peptide GRIP-1
Descriptor: (2E,4E,6Z,8E)-8-{3-[(2S)-butan-2-yl]-2-(3-methylbutyl)cyclohex-2-en-1-ylidene}-3,7-dimethylocta-2,4,6-trienoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Chattopadhyay, D, Yang, Z, Atigadda, V.
Deposit date:2022-05-02
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Conformationally Defined Rexinoids for the Prevention of Inflammation and Nonmelanoma Skin Cancers.
J.Med.Chem., 65, 2022
7UW4
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BU of 7uw4 by Molmil
Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB113 and coactivator peptide GRIP-1
Descriptor: (2E,4E,6Z,8E)-3,7-dimethyl-8-[2-(3-methylbutyl)-3-propylcyclohex-2-en-1-ylidene]octa-2,4,6-trienoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Chattopadhyay, D, Yang, Z, Atigadda, V.
Deposit date:2022-05-02
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformationally Defined Rexinoids for the Prevention of Inflammation and Nonmelanoma Skin Cancers.
J.Med.Chem., 65, 2022
6QSL
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BU of 6qsl by Molmil
mTFP* closed conformation: I197C-Y200H-Y204H mutant for enhanced metal binding
Descriptor: GFP-like fluorescent chromoprotein cFP484
Authors:Fischer, J, Renn, D, Arold, T.A, Groll, M.
Deposit date:2019-02-21
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Robust and Versatile Host Protein for the Design and Evaluation of Artificial Metal Centers
Acs Catalysis, 2019
6QP8
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BU of 6qp8 by Molmil
Drosophila Semaphorin 2b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRATE ANION, ...
Authors:Robinson, R.A, Rozbesky, D, Harlos, K, Siebold, C, Jones, E.Y.
Deposit date:2019-02-13
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Diversity of oligomerization in Drosophila semaphorins suggests a mechanism of functional fine-tuning.
Nat Commun, 10, 2019
7TZJ
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BU of 7tzj by Molmil
SARS CoV-2 PLpro in complex with inhibitor 3k
Descriptor: DIMETHYL SULFOXIDE, N-[(3-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide, Papain-like protease, ...
Authors:Calleja, D.J, Klemm, T, Lechtenberg, B.C, Kuchel, N.W, Lessene, G, Komander, D.
Deposit date:2022-02-15
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Insights Into Drug Repurposing, as Well as Specificity and Compound Properties of Piperidine-Based SARS-CoV-2 PLpro Inhibitors.
Front Chem, 10, 2022
1XVQ
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BU of 1xvq by Molmil
Crystal structure of thiol peroxidase from Mycobacterium tuberculosis
Descriptor: AMMONIUM ION, YTTRIUM (III) ION, thiol peroxidase
Authors:Rho, B.S, Pedelacq, J.D, Hung, L.W, Holton, J.M, Vigil, D, Kim, S.I, Park, M.S, Terwilliger, T.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-10-28
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Functional and Structural Characterization of a Thiol Peroxidase from Mycobacterium tuberculosis.
J.Mol.Biol., 361, 2006
7TXZ
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BU of 7txz by Molmil
Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the distal region)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, Z.Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2022-02-10
Release date:2022-03-09
Last modified:2022-04-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Architecture and antigenicity of the Nipah virus attachment glycoprotein.
Science, 375, 2022
7TY0
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BU of 7ty0 by Molmil
Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the stalk region)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, Z.Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2022-02-10
Release date:2022-03-09
Last modified:2022-04-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Architecture and antigenicity of the Nipah virus attachment glycoprotein.
Science, 375, 2022
6QYO
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BU of 6qyo by Molmil
Structure of MBP-Mcl-1 in complex with compound 18a
Descriptor: (2~{R})-2-[5-[3-chloranyl-2-methyl-4-[2-(4-methylpiperazin-1-yl)ethoxy]phenyl]-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid, Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Dokurno, P, Szlavik, Z, Ondi, L, Csekei, M, Paczal, A, Szabo, Z.B, Radics, G, Murray, J, Davidson, J, Chen, I, Davis, B, Hubbard, R.E, Pedder, C, Surgenor, A.E, Smith, J, Robertson, A, LeToumelin-Braizat, G, Cauquil, N, Zarka, M, Demarles, D, Perron-Sierra, F, Geneste, O, Kotschy, A.
Deposit date:2019-03-09
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Guided Discovery of a Selective Mcl-1 Inhibitor with Cellular Activity.
J.Med.Chem., 62, 2019
6QT9
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BU of 6qt9 by Molmil
Cryo-EM structure of SH1 full particle.
Descriptor: ORF 24, ORF 25, ORF 31, ...
Authors:De Colibus, L, Roine, E, Walter, T.S, Ilca, S.L, Wang, X, Wang, N, Roseman, A.M, Bamford, D, Huiskonen, J.T, Stuart, D.I.
Deposit date:2019-02-22
Release date:2019-04-10
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Assembly of complex viruses exemplified by a halophilic euryarchaeal virus.
Nat Commun, 10, 2019
6QP9
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BU of 6qp9 by Molmil
Drosophila Semaphorin 1a, extracellular domains 1-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Semaphorin-1A
Authors:Rozbesky, D, Robinson, R.A, Harlos, K, Siebold, C, Jones, E.Y.
Deposit date:2019-02-13
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Diversity of oligomerization in Drosophila semaphorins suggests a mechanism of functional fine-tuning.
Nat Commun, 10, 2019
6RJN
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BU of 6rjn by Molmil
Crystal structure of a Fungal Catalase at 2.3 Angstroms
Descriptor: CHLORIDE ION, Catalase, DI(HYDROXYETHYL)ETHER, ...
Authors:Gomez, S, Navas-Yuste, S, Payne, A.M, Rivera, W, Lopez-Estepa, M, Brangbour, C, Fulla, D, Juanhuix, J, Fernandez, F.J, Vega, M.C.
Deposit date:2019-04-28
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Peroxisomal catalases from the yeasts Pichia pastoris and Kluyveromyces lactis as models for oxidative damage in higher eukaryotes.
Free Radic. Biol. Med., 141, 2019
6QPQ
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BU of 6qpq by Molmil
The structure of the cohesin head module elucidates the mechanism of ring opening
Descriptor: Sister chromatid cohesion protein 1, Structural maintenance of chromosomes protein,Structural maintenance of chromosomes protein
Authors:Li, Y, Muir, K.W, Panne, D.
Deposit date:2019-02-14
Release date:2020-02-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of the cohesin ATPase elucidates the mechanism of SMC-kleisin ring opening.
Nat.Struct.Mol.Biol., 27, 2020
4U00
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BU of 4u00 by Molmil
Crystal structure of TTHA1159 in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Amino acid ABC transporter, ATP-binding protein, ...
Authors:Karthiga Devi, S, Chichili, V.P.R, Velmurugan, D, Sivaraman, J.
Deposit date:2014-07-11
Release date:2015-05-13
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the hydrolysis of ATP by a nucleotide binding subunit of an amino acid ABC transporter from Thermus thermophilus
J.Struct.Biol., 190, 2015
1XMK
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BU of 1xmk by Molmil
The Crystal structure of the Zb domain from the RNA editing enzyme ADAR1
Descriptor: CADMIUM ION, CHLORIDE ION, Double-stranded RNA-specific adenosine deaminase, ...
Authors:Athanasiadis, A, Placido, D, Maas, S, Brown II, B.A, Lowenhaupt, K, Rich, A.
Deposit date:2004-10-03
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:The Crystal Structure of the Z[beta] Domain of the RNA-editing Enzyme ADAR1 Reveals Distinct Conserved Surfaces Among Z-domains.
J.Mol.Biol., 351, 2005
6QSS
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BU of 6qss by Molmil
Crystal Structure of Ignicoccus islandicus malate dehydrogenase co-crystallized with 10 mM Tb-Xo4
Descriptor: CHLORIDE ION, Malate dehydrogenase, TERBIUM(III) ION, ...
Authors:Roche, J, Girard, E, Madern, D.
Deposit date:2019-02-21
Release date:2019-07-17
Last modified:2024-01-24
Method:SOLUTION SCATTERING (1.892 Å), X-RAY DIFFRACTION
Cite:The archaeal LDH-like malate dehydrogenase from Ignicoccus islandicus displays dual substrate recognition, hidden allostery and a non-canonical tetrameric oligomeric organization.
J.Struct.Biol., 208, 2019
6QTI
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BU of 6qti by Molmil
Structure of ovine transhydrogenase in the presence of NADP+ in a "double face-down" conformation
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DODECANE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2019-02-25
Release date:2019-08-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and mechanism of mitochondrial proton-translocating transhydrogenase.
Nature, 573, 2019
1XXJ
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BU of 1xxj by Molmil
Urate oxidase from aspergillus flavus complexed with 5-amino 6-nitro uracil
Descriptor: 5-AMINO-6-NITROPYRIMIDINE-2,4(1H,3H)-DIONE, BENZENE, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-11-05
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
6QUH
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BU of 6quh by Molmil
GHK tagged GFP variant crystal form II at 1.34A wavelength
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, COPPER (II) ION, ...
Authors:Huyton, T, Gorlich, D.
Deposit date:2019-02-27
Release date:2020-05-27
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 76, 2020

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