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PDB: 22297 件

3DL3
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Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98 .
分子名称: Tellurite resistance protein B
著者Kuzin, A.P, Su, M, Seetharaman, J, Wang, D, Mao, L, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-26
公開日2008-08-26
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98.
To be Published
8AJZ
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Serial femtosecond crystallography structure of CO bound ba3- type cytochrome c oxidase at 2 milliseconds after irradiation by a 532 nm laser
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON MONOXIDE, COPPER (II) ION, ...
著者Safari, C, Ghosh, S, Andersson, R, Johannesson, J, Donoso, A.V, Bath, P, Bosman, R, Dahl, P, Nango, E, Tanaka, R, Zoric, D, Svensson, E, Nakane, T, Iwata, S, Neutze, R, Branden, G.
登録日2022-07-29
公開日2023-08-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Time-resolved serial crystallography to track the dynamics of carbon monoxide in the active site of cytochrome c oxidase.
Sci Adv, 9, 2023
5U8S
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Structure of eukaryotic CMG helicase at a replication fork
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, DNA (26-MER), ...
著者Li, H, Li, B, Georgescu, R, Yuan, Z, Santos, R, Sun, J, Zhang, D, Yurieva, O, O'Donnell, M.E.
登録日2016-12-14
公開日2017-01-25
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (6.101 Å)
主引用文献Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UA8
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Ocellatin-F1, solution structure in SDS micelle by NMR spectroscopy
分子名称: Ocellatin-F1
著者Gusmao, K.A.G, dos Santos, D.M, Santos, V.M, Pilo-Veloso, D, de Lima, M.E, Resende, J.M.
登録日2016-12-19
公開日2017-03-29
最終更新日2018-04-18
実験手法SOLUTION NMR
主引用文献NMR structures in different membrane environments of three ocellatin peptides isolated from Leptodactylus labyrinthicus.
Peptides, 103, 2018
3DID
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Crystal structure of the F87M/L110M mutant of human transthyretin at pH 4.6 soaked
分子名称: ACETATE ION, GLYCEROL, Transthyretin, ...
著者Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R.
登録日2008-06-20
公開日2008-07-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition.
J.Biol.Chem., 285, 2010
2K68
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NMR solution structure of modified DNA containing imidazole nucleosides at neutral pH
分子名称: DNA (5'-D(*DTP*DTP*DAP*DAP*DTP*DTP*DTP*(D33)P*(D33)P*(D33)P*DAP*DAP*DAP*DTP*DTP*DAP*DA)-3')
著者Johannsen, S, Boehme, D, Duepre, N, Mueller, J, Sigel, R.K.O.
登録日2008-07-04
公開日2009-07-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure at different pHs of a DNA hairpin containing artificial nucleotides
To be Published
5UBE
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Crystal structure of the N-terminal domain (domain 1) of RctB
分子名称: RctB replication initiator protein
著者Orlova, N, Ivashkiv, O, Waldor, M.K, Jeruzalmi, D.
登録日2016-12-20
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The replication initiator of the cholera pathogen's second chromosome shows structural similarity to plasmid initiators.
Nucleic Acids Res., 45, 2017
3ZR7
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Structural basis for agonism and antagonism for a set of chemically related progesterone receptor modulators
分子名称: 2-CHLORO-N-[[4-(3,5-DIMETHYLISOXAZOL-4-YL)PHENYL]METHYL]-1,4-DIMETHYL-1H-PYRAZOLE-4-SULFONAMIDE, GLYCEROL, PROGESTERONE RECEPTOR, ...
著者Lusher, S.J, Raaijmakers, H.C.A, Vu-Pham, D, Dechering, K, Wai Lam, T, Brown, A.R, Hamilton, N.M, Nimz, O, Azevedo, R, McGuire, R, Oubrie, A, de Vlieg, J.
登録日2011-06-15
公開日2011-08-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for agonism and antagonism for a set of chemically related progesterone receptor modulators.
J. Biol. Chem., 286, 2011
5UBQ
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BU of 5ubq by Molmil
Cryo-EM structure of ciliary microtubule doublet
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Ichikawa, M, Liu, D, Kastritis, P.L, Basu, K, Bui, K.H.
登録日2016-12-21
公開日2017-05-10
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Subnanometre-resolution structure of the doublet microtubule reveals new classes of microtubule-associated proteins.
Nat Commun, 8, 2017
2KAP
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Solution structure of DLC1-SAM
分子名称: Rho GTPase-activating protein 7
著者Yang, S, Yang, D.
登録日2008-11-12
公開日2009-10-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Characterization of DLC1-SAM equilibrium unfolding at the amino acid residue level
Biochemistry, 48, 2009
2K7Y
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Solution fold of HIV-1 Virus protein U cytoplasmic domain in the presence of DPC micelles
分子名称: Protein Vpu
著者Wittlich, M, Koenig, B.W, Willbold, D.
登録日2008-08-28
公開日2009-11-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structural characterization of HIV-1 virus protein U cytoplasmic domain in the presence of dodecylphosphatidylcholine micelles
Febs J., 276, 2009
3ZUA
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A C39-like domain
分子名称: ALPHA-HEMOLYSIN TRANSLOCATION ATP-BINDING PROTEIN HLYB
著者Lecher, J, Schwarz, C.K.W, Stoldt, M, Smits, S.S.H, Willbold, D, Schmitt, L.
登録日2011-07-18
公開日2012-08-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An Rtx Transporter Tethers its Unfolded Substrate During Secretion Via a Unique N-Terminal Domain.
Structure, 20, 2012
5TOO
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BU of 5too by Molmil
Crystal structure of alkaline phosphatase PafA T79S, N100A, K162A, R164A mutant
分子名称: Alkaline phosphatase PafA, CHLORIDE ION, ZINC ION
著者Lyubimov, A.Y, Sunden, F, AlSadhan, I, Herschlag, D.
登録日2016-10-18
公開日2017-11-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Differential catalytic promiscuity of the alkaline phosphatase superfamily bimetallo core reveals mechanistic features underlying enzyme evolution.
J. Biol. Chem., 292, 2017
8ALU
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Crystal structure of the teichoic acid binding domain of SlpA, S-layer protein from Lactobacillus acidophilus (aa. 314-444)
分子名称: PHOSPHATE ION, S-layer protein
著者Eder, M, Dordic, A, Sagmeister, T, Vejzovic, D, Pavkov-Keller, T.
登録日2022-08-01
公開日2023-08-16
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献The molecular architecture of Lactobacillus S-layer: Assembly and attachment to teichoic acids.
Proc.Natl.Acad.Sci.USA, 121, 2024
2K5H
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BU of 2k5h by Molmil
Solution NMR structure of protein encoded by MTH693 from Methanobacterium thermoautotrophicum: Northeast Structural Genomics Consortium target tt824a
分子名称: Conserved protein
著者Wu, Y, Singarapu, K, Semesi, A, Sukumaran, D, Yee, A, Garcia, M, Arrowsmith, C, Szyperski, T, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-27
公開日2008-08-19
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of protein encoded by MTH693 from Methanobacterium thermoautotrophicum: Northeast Structural Genomics Consortium target tt824a
To be Published
2KEL
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BU of 2kel by Molmil
Structure of the transcription regulator SvtR from the hyperthermophilic archaeal virus SIRV1
分子名称: Uncharacterized protein 56B
著者Guilliere, F, Kessler, A, Peixeiro, N, Sezonov, G, Prangishvili, D, Delepierre, M, Guijarro, J.I.
登録日2009-01-30
公開日2009-06-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure, function, and targets of the transcriptional regulator SvtR from the hyperthermophilic archaeal virus SIRV1.
J.Biol.Chem., 284, 2009
3DTD
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BU of 3dtd by Molmil
Crystal structure of invasion associated protein b from bartonella henselae
分子名称: GLYCEROL, Invasion-associated protein B
著者Patskovsky, Y, Ozyurt, S, Freeman, J, Slocombe, A, Groshong, C, Koss, J, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-07-14
公開日2008-09-09
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of Invasion Associated Protein B from Bartonella Henselae.
To be Published
2KKO
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BU of 2kko by Molmil
Solution NMR structure of the homodimeric winged helix-turn-helix DNA-binding domain (fragment 1-100) Mb0332 from Mycobacterium bovis, a possible ArsR-family transcriptional regulator. Northeast Structural Genomics Consortium Target MbR242E.
分子名称: POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY ARSR-FAMILY)
著者Ramelot, T.A, Cort, J.R, Wang, D, Ciccosanti, C, Jiang, M, Nair, R, Rost, B, Swapna, G, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2009-06-26
公開日2009-08-11
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of the homodimeric winged helix-turn-helix DNA-binding domain (fragment 1-100) Mb0332 from Mycobacterium bovis, a possible ArsR-family transcriptional regulator. Northeast Structural Genomics Consortium Target MbR242E.
To be Published
5UCD
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BU of 5ucd by Molmil
Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+ and Benzoate Adduct
分子名称: NAD(P)-dependent benzaldehyde dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zahniser, M.P.D, Prasad, S, Kneen, M.M, Kreinbring, C.A, Petsko, G.A, Ringe, D, McLeish, M.J.
登録日2016-12-22
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure and mechanism of benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633, a member of the Class 3 aldehyde dehydrogenase superfamily.
Protein Eng. Des. Sel., 30, 2017
4AJG
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BU of 4ajg by Molmil
Identification and structural characterization of PDE10 fragment inhibitors
分子名称: CAMP AND CAMP-INHIBITED CGMP 3', 5'-CYCLIC PHOSPHODIESTERASE 10A, MAGNESIUM ION, ...
著者Johansson, P, Albert, J.S, Spadola, L, Akerud, T, Back, E, Hillertz, P, Horsefeld, R, Scott, C, Spear, N, Tian, G, Tigerstrom, A, Aharony, D, Geschwindner, S.
登録日2012-02-16
公開日2013-03-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification and Structural Characterization of Pde10 Fragment Inhibitors
To be Published
3DRT
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BU of 3drt by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 scrambledFP-MPER scrHyb3K construct GIGAFGLLGFLAAGSKK-Ahx-K656NEQELLELDKWASLWN671
分子名称: 2F5 Fab' heavy chain, 2F5 Fab' light chain, GLYCEROL, ...
著者Julien, J.-P, Bryson, S, de la Torre, B.G, Andreu, D, Nieva, J.L, Pai, E.F.
登録日2008-07-11
公開日2009-06-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural constraints imposed by the conserved fusion peptide on the HIV-1 gp41 epitope recognized by the broadly neutralizing antibody 2F5.
J.Phys.Chem.B, 113, 2009
409D
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BU of 409d by Molmil
CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES
分子名称: RNA (5'-R(*CP*CP*CP*IP*UP*GP*GP*G)-3')
著者Pan, B, Mitra, S.N, Sun, L, Hart, D, Sundaralingam, M.
登録日1998-06-26
公開日1999-01-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an RNA octamer duplex r(CCCIUGGG)2 incorporating tandem I.U wobbles.
Nucleic Acids Res., 26, 1998
423D
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5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'
分子名称: DNA (5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'), MAGNESIUM ION
著者Rozenberg, H, Rabinovich, D, Frolow, F, Hegde, R.S, Shakked, Z.
登録日1998-09-14
公開日1999-10-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets.
Proc.Natl.Acad.Sci.USA, 95, 1998
3E0S
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BU of 3e0s by Molmil
Crystal structure of an uncharacterized protein from Chlorobium tepidum
分子名称: SULFATE ION, uncharacterized protein
著者Bonanno, J.B, Dickey, M, Bain, K.T, Powell, A, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-07-31
公開日2008-08-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure of an uncharacterized protein from Chlorobium tepidum
To be Published
5TRV
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Crystal structure of a de novo designed protein with curved beta-sheet
分子名称: DI(HYDROXYETHYL)ETHER, denovo NTF2
著者Basanta, B, Oberdorfer, G, Marcos, E, Chidyausiku, T.M, Sankaran, B, Baker, D.
登録日2016-10-27
公開日2017-01-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Principles for designing proteins with cavities formed by curved beta sheets.
Science, 355, 2017

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