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PDB: 22172 件

7ZDT
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BU of 7zdt by Molmil
Occ(apo/return) conformation of CydDC mutant (E500Q.C) in ATP(CydC) bound state (Dataset-18)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDE
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BU of 7zde by Molmil
IF(apo/as isolated) conformation of CydDC in AMP-PNP(CydD) bound state (Dataset-4)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, MAGNESIUM ION, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZEC
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BU of 7zec by Molmil
IF(heme/confined) conformation of CydDC in ATP(CydD) bound state (Dataset-15)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ...
著者Wu, D, Safarian, S.
登録日2022-03-30
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDW
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BU of 7zdw by Molmil
IF(heme/confined) conformation of CydDC mutant (E500Q.C) in AMP-PNP(CydD) bound state (Dataset-22)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, HEME B/C, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDA
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BU of 7zda by Molmil
IF(apo/asym) conformation of CydDC in ADP+Pi(CydC)/ATP(CydD) bound state (Dataset-2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDL
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BU of 7zdl by Molmil
IF(heme/coordinated) conformation of CydDC in AMP-PNP(CydC)/AMP-PNP(CydD) bound state (Dataset-8)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, HEME B/C, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZE5
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BU of 7ze5 by Molmil
Occ(apo/return) conformation of CydDC mutant (E500Q.C) in ATP(CydC)/AMP-PNP(CydD) bound state (Dataset-23)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ...
著者Wu, D, Safarian, S.
登録日2022-03-30
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
5YFM
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BU of 5yfm by Molmil
Human isocitrate dehydrogenase 1 bound with NADP
分子名称: Isocitrate dehydrogenase [NADP] cytoplasmic, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Nordlund, P, Chen, D, Jansson, A, Larsson, A.
登録日2017-09-21
公開日2017-10-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human isocitrate dehydrogenase 1 bound with NADP
To Be Published
7ZDC
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BU of 7zdc by Molmil
IF(heme/confined) conformation of CydDC in ADP(CydD) bound state (Dataset-3)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZD5
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BU of 7zd5 by Molmil
IF(apo/as isolated) conformation of CydDC (Dataset-1)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDK
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BU of 7zdk by Molmil
IF(apo/asym) conformation of CydDC in AMP-PNP(CydC)/AMP-PNP(CydD) bound state (Dataset-8)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, MAGNESIUM ION, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDU
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BU of 7zdu by Molmil
Occ(apo/return) conformation of CydDC mutant (E500Q.C) in ATP(CydC)/ATP(CydD) bound state (Dataset-19)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
1BJT
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BU of 1bjt by Molmil
TOPOISOMERASE II RESIDUES 409-1201
分子名称: TOPOISOMERASE II
著者Fass, D, Bogden, C.E, Berger, J.M.
登録日1998-06-29
公開日1999-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Quaternary changes in topoisomerase II may direct orthogonal movement of two DNA strands.
Nat.Struct.Biol., 6, 1999
5WTZ
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BU of 5wtz by Molmil
Crystal structure of C. perfringens iota-like enterotoxin CPILE-a with NAD+
分子名称: Binary enterotoxin of Clostridium perfringens component a, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Toniti, W, Yoshida, T, Tsurumura, T, Irikura, D, Tsuge, H.
登録日2016-12-15
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Crystal structure and structure-based mutagenesis of actin-specific ADP-ribosylating toxin CPILE-a as novel enterotoxin
PLoS ONE, 12, 2017
1BT6
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BU of 1bt6 by Molmil
P11 (S100A10), LIGAND OF ANNEXIN II IN COMPLEX WITH ANNEXIN II N-TERMINUS
分子名称: ANNEXIN II, S100A10
著者Rety, S, Sopkova, J, Renouard, M, Osterloh, D, Gerke, V, Russo-Marie, F, Lewit-Bentley, A.
登録日1998-09-02
公開日1999-01-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of a complex of p11 with the annexin II N-terminal peptide.
Nat.Struct.Biol., 6, 1999
5WMW
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BU of 5wmw by Molmil
Structural Insights into Substrate and Inhibitor Binding Sites in Human Indoleamine 2,3-Dioxygenase 1
分子名称: CYANIDE ION, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Lewis-Ballester, A, Yeh, S.R, Pham, K.N, Batabyal, D, Karkashon, S, Bonanno, J.B, Poulos, T.L.
登録日2017-07-31
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Structural insights into substrate and inhibitor binding sites in human indoleamine 2,3-dioxygenase 1.
Nat Commun, 8, 2017
2LZ5
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BU of 2lz5 by Molmil
Solution structure of a Novel Alpha-Conotoxin TxIB
分子名称: Conotoxin_TxIB
著者Luo, S, Zhangsun, D, Wu, Y, Zhu, X, Hu, Y, McIntyre, M, Christensen, S, Akcan, M, Craik, D, McIntosh, J.
登録日2012-09-23
公開日2012-12-05
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Characterization of a novel alpha-conotoxin from conus textile that selectively targets alpha6/alpha3beta2beta3 nicotinic acetylcholine receptors.
J.Biol.Chem., 288, 2013
8CLO
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BU of 8clo by Molmil
Zearalenone lactonase from Streptomyces coelicoflavus
分子名称: 1,2-ETHANEDIOL, Hydrolase
著者Puehringer, D, Grishkovskaya, I, Mlynek, G, Kostan, J.
登録日2023-02-17
公開日2024-02-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Bacterial Lactonases ZenA with Noncanonical Structural Features Hydrolyze the Mycotoxin Zearalenone.
Acs Catalysis, 14, 2024
5WW8
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BU of 5ww8 by Molmil
Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 480 iron atoms per dodecamer
分子名称: CHLORIDE ION, FE (II) ION, FE (III) ION, ...
著者Williams, S.M, Chatterji, D.
登録日2016-12-31
公開日2017-08-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
5A1S
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BU of 5a1s by Molmil
Crystal structure of the sodium-dependent citrate symporter SeCitS form Salmonella enterica.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, CITRATE ANION, ...
著者Woehlert, D, Groetzinger, M.J, Kuhlbrandt, W, Yildiz, O.
登録日2015-05-05
公開日2016-02-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism of Na(+)-dependent citrate transport from the structure of an asymmetrical CitS dimer.
Elife, 4, 2015
1BK4
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BU of 1bk4 by Molmil
CRYSTAL STRUCTURE OF RABBIT LIVER FRUCTOSE-1,6-BISPHOSPHATASE AT 2.3 ANGSTROM RESOLUTION
分子名称: MAGNESIUM ION, PROTEIN (FRUCTOSE-1,6-BISPHOSPHATASE), SULFATE ION
著者Ghosh, D, Weeks, C.M, Erman, M, Roszak, A.W, Kaiser, R, Jornvall, H.
登録日1998-07-14
公開日1998-07-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of rabbit liver fructose 1,6-bisphosphatase at 2.3 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BX0
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BU of 1bx0 by Molmil
Ferredoxin:nadp+ oxidoreductase (ferredoxin reductase) mutant e312l
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, PROTEIN (FERREDOXIN:NADP+ OXIDOREDUCTASE), ...
著者Aliverti, A, Deng, Z, Ravasi, D, Piubelli, L, Karplus, P.A, Zanetti, G.
登録日1998-10-10
公開日1998-10-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Probing the function of the invariant glutamyl residue 312 in spinach ferredoxin-NADP+ reductase.
J.Biol.Chem., 273, 1998
8CLV
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BU of 8clv by Molmil
Zearalenone lactonase of Rhodococcus erythropolis in complex with hydrolyzed zearalenone
分子名称: 2,4-dihydroxy-6-[(1E,10S)-10-hydroxy-6-oxoundec-1-en-1-yl]benzoic acid, Zearalenone lactonase
著者Puehringer, D.
登録日2023-02-17
公開日2024-02-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Bacterial Lactonases ZenA with Noncanonical Structural Features Hydrolyze the Mycotoxin Zearalenone.
Acs Catalysis, 14, 2024
1BQU
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BU of 1bqu by Molmil
CYTOKYNE-BINDING REGION OF GP130
分子名称: GLYCEROL, PROTEIN (GP130), SULFATE ION
著者Bravo, J, Staunton, D, Heath, J.K, Jones, E.Y.
登録日1998-08-18
公開日1998-08-26
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a cytokine-binding region of gp130.
EMBO J., 17, 1998
5W57
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BU of 5w57 by Molmil
Structure of Holo AztC
分子名称: Periplasmic solute binding protein, ZINC ION
著者Avalos, D, Yukl, E.T.
登録日2017-06-14
公開日2017-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanisms of zinc binding to the solute-binding protein AztC and transfer from the metallochaperone AztD.
J. Biol. Chem., 292, 2017

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件を2024-07-10に公開中

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