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PDB: 22172 results

4GU5
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Structure of Full-length Drosophila Cryptochrome
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
Authors:Zoltowski, B.D, Vaidya, A.T, Top, D, Widom, J, Young, M.W, Levy, C, Jones, A.R, Scrutton, N.S, Leys, D, Crane, B.R.
Deposit date:2012-08-29
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Updated structure of Drosophila cryptochrome.
Nature, 495, 2013
2FCA
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The structure of BsTrmB
Descriptor: POTASSIUM ION, tRNA (guanine-N(7)-)-methyltransferase
Authors:Zegers, I, Van Vliet, F, Bujnicki, J, Kosinski, J, Gigot, D, Droogmans, L.
Deposit date:2005-12-12
Release date:2006-08-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Bacillus subtilis TrmB, the tRNA (m7G46) methyltransferase.
Nucleic Acids Res., 34, 2006
2FH6
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BU of 2fh6 by Molmil
Crystal Structure Analysis of Klebsiella pneumoniae pullulanase complexed with glucose
Descriptor: Alpha-dextrin endo-1,6-alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose
Authors:Mikami, B, Iwamoto, H, Katsuya, Y, Yoon, H.-J, Demirkan-Sarikaya, E, Malle, D.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2022-03-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
2FCJ
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Structure of small TOPRIM domain protein from Bacillus stearothermophilus.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Rezacova, P, Chen, Y, Borek, D, Collart, F, Joachimiak, A, Otwinowski, Z, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-12
Release date:2006-01-24
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus.
Proteins, 70, 2008
2FD9
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BU of 2fd9 by Molmil
X-ray Crystal Structure of Chemically Synthesized Crambin-{alpha}carboxamide
Descriptor: Crambin
Authors:Bang, D, Tereshko, V, Kossiakoff, A.A, Kent, S.B.
Deposit date:2005-12-13
Release date:2007-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Role of a salt bridge in the model protein crambin explored by chemical protein synthesis: X-ray structure of a unique protein analogue, [V15A]crambin-alpha-carboxamide.
Mol Biosyst, 5, 2009
2FIP
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Phage phi29 transcription regulator p4
Descriptor: Late genes activator
Authors:Badia, D, Camacho, A, Perez-Lago, L, Escandon, C, Salas, M, Coll, M.
Deposit date:2005-12-30
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of phage phi29 transcription regulator p4-DNA complex reveals an N-hook motif for DNA
Mol.Cell, 22, 2006
2FGU
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BU of 2fgu by Molmil
X-ray crystal structure of HIV-1 Protease T80S variant in complex with the inhibitor saquinavir used to explore the role of invariant Thr80 in HIV-1 protease structure, function, and viral infectivity.
Descriptor: (2S)-2-amino-3-phenylpropane-1,1-diol, 2-METHYL-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID, ASPARAGINE, ...
Authors:Foulkes, J.E, Prabu-Jeyabalan, M, Cooper, D, Schiffer, C.A.
Deposit date:2005-12-22
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of invariant Thr80 in human immunodeficiency virus type 1 protease structure, function, and viral infectivity.
J.Virol., 80, 2006
1LVC
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BU of 1lvc by Molmil
Crystal structure of the adenylyl cyclase domain of anthrax edema factor (EF) in complex with calmodulin and 2' deoxy, 3' anthraniloyl ATP
Descriptor: 3'ANTHRANILOYL-2'-DEOXY-ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, YTTERBIUM (III) ION, ...
Authors:Shen, Y, Lee, Y.-S, Soelaiman, S, Bergson, P, Lu, D, Chen, A, Beckingham, K, Grabarek, Z, Mrksich, M, Tang, W.-J.
Deposit date:2002-05-28
Release date:2002-12-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Physiological calcium concentrations regulate calmodulin binding and catalysis of adenylyl cyclase exotoxins
Embo J., 21, 2002
2D3Z
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X-ray crystal structure of hepatitis C virus RNA-dependent RNA polymerase in complex with non-nucleoside analogue inhibitor
Descriptor: 5-(4-FLUOROPHENYL)-3-{[(4-METHYLPHENYL)SULFONYL]AMINO}THIOPHENE-2-CARBOXYLIC ACID, polyprotein
Authors:Biswal, B.K, Wang, M, Cherney, M.M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Bedard, J, James, M.N.G.
Deposit date:2005-10-04
Release date:2006-08-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Non-nucleoside Inhibitors Binding to Hepatitis C Virus NS5B Polymerase Reveal a Novel Mechanism of Inhibition
J.Mol.Biol., 361, 2006
4JXI
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Directed evolution and rational design of a de novo designed esterase toward improved catalysis. Northeast Structural Genomics Consortium (NESG) Target OR184
Descriptor: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, BROMIDE ION, GLYCEROL, ...
Authors:Kuzin, A, Smith, M.D, Richter, F, Lew, S, Seetharaman, R, Bryan, C, Lech, Z, Kiss, G, Moretti, R, Maglaqui, M, Xiao, R, Kohan, E, Smith, M, Everett, J.K, Nguyen, R, Pande, V, Hilvert, D, Kornhaber, G, Baker, D, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-03-28
Release date:2013-05-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Directed evolution and rational design of a de novo designed esterase toward improved catalysis. Northeast Structural Genomics Consortium (NESG) Target OR184
To be Published
2D31
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BU of 2d31 by Molmil
Crystal structure of disulfide-linked HLA-G dimer
Descriptor: 9-mer peptide from Histone H2A, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Shiroishi, M, Kuroki, K, Ose, T, Rasubala, L, Shiratori, I, Arase, H, Tsumoto, K, Kumagai, I, Kohda, D, Maenaka, K.
Deposit date:2005-09-23
Release date:2006-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Efficient Leukocyte Ig-like Receptor Signaling and Crystal Structure of Disulfide-linked HLA-G Dimer
J.Biol.Chem., 281, 2006
4JBC
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BU of 4jbc by Molmil
Crystal Structure of the computationally designed serine hydrolase 3mmj_2, Northeast Structural Genomics Consortium (NESG) Target OR318
Descriptor: PHOSPHATE ION, designed serine hydrolase 3mmj_2
Authors:Kuzin, A, Lew, S, Rajagopalan, S, Seetharaman, J, Maglaqui, M, Xiao, R, Lee, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Baker, D, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-02-19
Release date:2013-03-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Crystal Structure of the computationally designed serine hydrolase 3mmj_2, Northeast Structural Genomics Consortium (NESG) Target OR318
To be Published
2D1L
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BU of 2d1l by Molmil
Structure of F-actin binding domain IMD of MIM (Missing In Metastasis)
Descriptor: Metastasis suppressor protein 1
Authors:Lee, S.H, Kerff, F, Chereau, D, Ferron, F, Dominguez, R.
Deposit date:2005-08-27
Release date:2006-09-12
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for the actin-binding function of missing-in-metastasis
Structure, 15, 2007
2D4G
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BU of 2d4g by Molmil
Structure of YjcG protein, a putative 2'-5' RNA ligase from Bacillus subtilis
Descriptor: hypothetical protein BSU11850
Authors:Li, D, Liang, Y.H, Su, X.D.
Deposit date:2005-10-19
Release date:2006-10-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of B. subtilis YjcG characterizing the YjcG-like group of 2H phosphoesterase superfamily.
Proteins, 72, 2008
2D3V
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Crystal Structure of Leukocyte Ig-like Receptor A5 (LILRA5/LIR9/ILT11)
Descriptor: leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1
Authors:Shiroishi, M, Kajikawa, M, Kuroki, K, Ose, T, Kohda, D, Maenaka, K.
Deposit date:2005-10-03
Release date:2006-06-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the human monocyte-activating receptor,
J.Biol.Chem., 281, 2006
2D6C
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BU of 2d6c by Molmil
Crystal structure of myoglobin reconstituted with iron porphycene
Descriptor: IMIDAZOLE, Myoglobin, PORPHYCENE CONTAINING FE
Authors:Hayashi, T, Murata, D, Makino, M, Sugimoto, H, Matsuo, T, Sato, H, Shiro, Y, Hisaeda, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-11-11
Release date:2006-10-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure and peroxidase activity of myoglobin reconstituted with iron porphycene
Inorg.Chem., 45, 2006
4J4Z
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BU of 4j4z by Molmil
Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Designed serine hydrolase variant OSH55.4_H1.2, ...
Authors:Kuzin, A.P, Lew, S, Rajagopalan, S, Maglaqui, M, Xiao, R, Lee, D, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-02-07
Release date:2013-03-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301
To be Published
2F3W
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BU of 2f3w by Molmil
solution structure of 1-110 fragment of staphylococcal nuclease in 2M TMAO
Descriptor: Thermonuclease
Authors:Liu, D, Xie, T, Feng, Y, Shan, L, Ye, K, Wang, J.
Deposit date:2005-11-22
Release date:2006-12-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
2F8H
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BU of 2f8h by Molmil
Structure of acetylcitrulline deacetylase from Xanthomonas campestris in metal-free form
Descriptor: aectylcitrulline deacetylase
Authors:Shi, D, Yu, X, Roth, L, Allewell, N.M, Tuchman, M.
Deposit date:2005-12-02
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of a novel N-acetyl-L-citrulline deacetylase from Xanthomonas campestris
Biophys.Chem., 126, 2007
2F8V
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BU of 2f8v by Molmil
Structure of full length telethonin in complex with the N-terminus of titin
Descriptor: N2B-Titin Isoform, SULFATE ION, Telethonin
Authors:Pinotsis, N, Petoukhov, M, Lange, S, Svergun, D, Zou, P, Gautel, M, Wilmanns, M.
Deposit date:2005-12-04
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Evidence for a dimeric assembly of two titin/telethonin complexes induced by the telethonin C-terminus.
J.Struct.Biol., 155, 2006
2FEQ
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BU of 2feq by Molmil
orally active thrombin inhibitors
Descriptor: Decapeptide Hirudin Analogue, N-(CARBOXYMETHYL)-3-CYCLOHEXYL-D-ALANYL-N-({4-[(E)-AMINO(IMINO)METHYL]-1,3-THIAZOL-2-YL}METHYL)-L-PROLINAMIDE, Thrombin heavy chain, ...
Authors:Mack, H, Baucke, D, Hornberger, W, Lange, U.E.W, Hoeffken, H.W.
Deposit date:2005-12-16
Release date:2006-08-08
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Orally active thrombin inhibitors. Part 1: optimization of the P1-moiety
Bioorg.Med.Chem.Lett., 16, 2006
2FGH
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ATP bound gelsolin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, gelsolin
Authors:Ma, Q, Robinson, R.C, Burtnick, L.D, Urosev, D.
Deposit date:2005-12-22
Release date:2006-04-18
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of gelsolin bound to ATP
J.Mol.Biol., 357, 2006
2FH2
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C-terminal half of gelsolin soaked in EGTA at pH 4.5
Descriptor: CALCIUM ION, Gelsolin
Authors:Chumnarnsilpa, S, Loonchanta, A, Xue, B, Choe, H, Urosev, D, Wang, H, Burtnick, L.D, Robinson, R.C.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Calcium ion exchange in crystalline gelsolin
J.Mol.Biol., 357, 2006
2FCM
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BU of 2fcm by Molmil
X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin with a Cubic Space Group
Descriptor: ACETATE ION, CADMIUM ION, Ubiquitin
Authors:Bang, D, Gribenko, A.V, Tereshko, V, Kossiakoff, A.A, Kent, S.B, Makhatadze, G.I.
Deposit date:2005-12-12
Release date:2006-01-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dissecting the energetics of protein alpha-helix C-cap termination through chemical protein synthesis.
Nat.Chem.Biol., 2, 2006
2ERY
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BU of 2ery by Molmil
The crystal structure of the Ras related protein RRas2 (RRAS2) in the GDP bound state
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein R-Ras2
Authors:Salah, E, Schoch, G, Turnbull, A, Papagrigoriou, E, Soundararajan, M, Burgess, N, Elkins, J, Gileadi, C, Gileadi, O, von Delft, F, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2005-10-25
Release date:2005-11-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of the Ras related protein RRas2 (RRAS2) in the GDP bound state
To be Published

222415

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