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PDB: 53878 results

6U9G
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BU of 6u9g by Molmil
Structure of Francisella PdpA-VgrG Complex, half-lidded
Descriptor: PdpA, VgrG
Authors:Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y, Zhou, Z.H, Horwitz, M.A.
Deposit date:2019-09-08
Release date:2019-10-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
6OKT
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BU of 6okt by Molmil
CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-04-15
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
7QU9
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BU of 7qu9 by Molmil
Structure of aminodeoxychorismate synthase component 1 (PabB) from Bacillus subtilis spizizenii.
Descriptor: Anthranilate synthase component I family protein, GLYCEROL, TRYPTOPHAN
Authors:Rooms, L.D, Race, P.R, Back, C.B, Burton, N.B, Willis, C.L, Stach, J.E.M, Duke, P.W, Hawkins, C.
Deposit date:2022-01-17
Release date:2023-01-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structure of aminodeoxychorismate synthase component 1 (PabB) from Bacillus subtilis spizizenii.
To Be Published
1D17
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BU of 1d17 by Molmil
DNA-NOGALAMYCIN INTERACTIONS
Descriptor: DNA (5'-D(*(5CM)P*GP*TP*AP*(5CM)P*G)-3'), NOGALAMYCIN
Authors:Egli, M, Williams, L.D, Frederick, C.A, Rich, A.
Deposit date:1990-08-08
Release date:1991-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA-nogalamycin interactions.
Biochemistry, 30, 1991
3IED
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BU of 3ied by Molmil
Crystal structure of N-terminal domain of Plasmodium falciparum Hsp90 (PF14_0417) in complex with AMPPN
Descriptor: AMP PHOSPHORAMIDATE, Heat shock protein
Authors:Pizarro, J.C, Wernimont, A.K, Lew, J, Hutchinson, A, Artz, J.D, Amaya, M.F, Plotnikova, O, Vedadi, M, Kozieradzki, I, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Botchkarev, A, Hui, R, Hills, T, Structural Genomics Consortium (SGC)
Deposit date:2009-07-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of N-terminal domain of Plasmodium falciparum Hsp90 (PF14_0417) in complex with AMPPN
TO BE PUBLISHED
6XS4
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BU of 6xs4 by Molmil
Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Formate C-acetyltransferase
Authors:Valleau, D, Evdokimova, E, Stogios, P.J, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-14
Release date:2020-08-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae.
To Be Published
8FU2
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BU of 8fu2 by Molmil
Crystal structure of T151G CAO1 in complex with piceatannol
Descriptor: BENZOIC ACID, Carotenoid oxygenase, FE (II) ION, ...
Authors:Kiser, P.D.
Deposit date:2023-01-16
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of T151G CAO1 in complex with piceatannol
To Be Published
8FU5
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BU of 8fu5 by Molmil
Crystal structure of Fe-CAO1 in complex with piceatannol
Descriptor: BENZOIC ACID, Carotenoid oxygenase, FE (II) ION, ...
Authors:Kiser, P.D.
Deposit date:2023-01-16
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of Fe-CAO1 in complex with piceatannol
To Be Published
3IJF
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BU of 3ijf by Molmil
Crystal structure of cytidine deaminase from Mycobacterium tuberculosis
Descriptor: Cytidine deaminase, ZINC ION
Authors:De Azevedo Jr, W.F, Basso, L.A, Santos, D.S.
Deposit date:2009-08-04
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural and functional analyses of Mycobacterium tuberculosis Rv3315c-encoded metal-dependent homotetrameric cytidine deaminase.
J.Struct.Biol., 169, 2010
5IAR
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BU of 5iar by Molmil
Caspase 3 V266W
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ACE-ASP-GLU-VAL-ASK, Caspase-3, ...
Authors:Maciag, J.J, Mackenzie, S.H, Tucker, M.B, Schipper, J.L, Swartz, P.D, Clark, A.C.
Deposit date:2016-02-21
Release date:2016-10-26
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection.
Proc.Natl.Acad.Sci.USA, 113, 2016
6TYM
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BU of 6tym by Molmil
KEAP1 Kelch domain in complex with Compound 9
Descriptor: (3S)-3-[2-(benzenecarbonyl)-5-methyl-1,2,3,4-tetrahydroisoquinolin-7-yl]-3-(1-ethyl-4-methyl-1H-benzotriazol-5-yl)propanoic acid, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Marcotte, D.J.
Deposit date:2019-08-09
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.422 Å)
Cite:Design, synthesis and identification of novel, orally bioavailable non-covalent Nrf2 activators.
Bioorg.Med.Chem.Lett., 30, 2020
6XWP
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BU of 6xwp by Molmil
Structure of glutamate transporter homologue GltTk in unsaturated conditions - outward-outward-inward configuration
Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
8GAP
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BU of 8gap by Molmil
Structure of LARP7 protein p65-telomerase RNA complex in telomerase
Descriptor: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ...
Authors:Wang, Y, He, Y, Wang, Y, Yang, Y, Singh, M, Eichhorn, C.D, Zhou, Z.H, Feigon, J.
Deposit date:2023-02-23
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of LARP7 Protein p65-telomerase RNA Complex in Telomerase Revealed by Cryo-EM and NMR.
J.Mol.Biol., 435, 2023
3OV5
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BU of 3ov5 by Molmil
Atomic structure of the Xanthomonas citri VirB7 globular domain.
Descriptor: ISOPROPYL ALCOHOL, Uncharacterized protein
Authors:Souza, D.P, Farah, C.S.
Deposit date:2010-09-15
Release date:2011-06-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:A Component of the Xanthomonadaceae Type IV Secretion System Combines a VirB7 Motif with a N0 Domain Found in Outer Membrane Transport Proteins.
Plos Pathog., 7, 2011
5IMU
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BU of 5imu by Molmil
A fragment of conserved hypothetical protein Rv3899c (residues 184-410) from Mycobacterium tuberculosis
Descriptor: POTASSIUM ION, Tat (Twin-arginine translocation) pathway signal sequence containing protein
Authors:Li, D.F, Gao, Y.R, Liu, Y.Y, Bi, L.J.
Deposit date:2016-03-07
Release date:2017-03-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Rv3899c(184-410), a hypothetical protein from Mycobacterium tuberculosis
Acta Crystallogr F Struct Biol Commun, 72, 2016
6XXZ
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BU of 6xxz by Molmil
Crystal structure of a de novo designed parallel four-helix coiled coil, 2-EK-4
Descriptor: 2-EK-4, PROPANOIC ACID
Authors:Edgell, C.L, Savery, N.J, Woolfson, D.N.
Deposit date:2020-01-29
Release date:2020-03-18
Last modified:2020-03-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:RobustDe Novo-Designed Homotetrameric Coiled Coils.
Biochemistry, 59, 2020
6I00
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BU of 6i00 by Molmil
Cryo-EM informed directed evolution of Nitrilase 4 leads to a change in quaternary structure.
Descriptor: Bifunctional nitrilase/nitrile hydratase NIT4
Authors:Mulelu, A.E, Woodward, J.D.
Deposit date:2018-10-24
Release date:2019-07-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM and directed evolution reveal howArabidopsisnitrilase specificity is influenced by its quaternary structure.
Commun Biol, 2, 2019
8GR2
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BU of 8gr2 by Molmil
Crystal structure of the GDSL-family esterase CJ0610C from Campylobacter jejuni
Descriptor: DUF459 domain-containing protein, SULFATE ION
Authors:Ki, D.U, Song, W.S, Yoon, S.I.
Deposit date:2022-08-31
Release date:2022-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and biochemical analysis of the GDSL-family esterase CJ0610C from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 631, 2022
6L34
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BU of 6l34 by Molmil
Crystal structure of the HMG domain of human FACT complex subunit SSRP1
Descriptor: FACT complex subunit SSRP1
Authors:Li, H.Y, Hu, T.T, Dou, Y.S, Su, D.
Deposit date:2019-10-09
Release date:2020-10-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Crystal structure of the HMG domain of human FACT complex subunit SSRP1
To Be Published
3F2Z
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BU of 3f2z by Molmil
Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B
Descriptor: uncharacterized protein BF3579
Authors:Forouhar, F, Lew, S, Seetharaman, J, Janjua, H, Xiao, R, Foote, E.L, Ciccosanti, C, Lee, D, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-10-30
Release date:2008-11-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B
To be Published
4QAO
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BU of 4qao by Molmil
Lysine-ligated cytochrome c with F82H
Descriptor: Cytochrome c iso-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Amacher, J.F, Zhu, M.Q, Zhong, F, Pletneva, E.K, Madden, D.R.
Deposit date:2014-05-05
Release date:2015-08-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Understanding PDZ Affinity and Selectivity: All Residues Considered
Thesis, 2014
8A5Q
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BU of 8a5q by Molmil
Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of Chaetomium thermophilum INO80 on straight DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin related protein 4 (Arp4), ...
Authors:Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P.
Deposit date:2022-06-15
Release date:2022-12-14
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Sci Adv, 8, 2022
6TYP
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BU of 6typ by Molmil
KEAP1 Kelch domain in complex with Compound 2
Descriptor: (3S)-3-[2-(benzenecarbonyl)-1,2,3,4-tetrahydroisoquinolin-7-yl]-3-(1-ethyl-4-methyl-1H-benzotriazol-5-yl)propanoic acid, FORMIC ACID, Kelch-like ECH-associated protein 1
Authors:Marcotte, D.J.
Deposit date:2019-08-09
Release date:2020-01-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Design, synthesis and identification of novel, orally bioavailable non-covalent Nrf2 activators.
Bioorg.Med.Chem.Lett., 30, 2020
4QEW
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BU of 4qew by Molmil
Crystal structure of BRD2(BD2) mutant with ligand ET bound (METHYL (2R)- 2-[(4S)-6-(4-CHLOROPHENYL)-8-METHOXY-1-METHYL-4H-[1,2,4]TRIAZOLO[4,3-A][1, 4]BENZODIAZEPIN-4-YL]BUTANOATE)
Descriptor: Bromodomain-containing protein 2, GLYCEROL, NICKEL (II) ION, ...
Authors:Tallant, C, Baud, M, Lin-Shiao, E, Chirgadze, D.Y, Ciulli, A.
Deposit date:2014-05-19
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Chemical biology. A bump-and-hole approach to engineer controlled selectivity of BET bromodomain chemical probes.
Science, 346, 2014
6UID
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BU of 6uid by Molmil
Structure of the cytoplasmic domain of the T3SS sorting platform protein PscD from P. aeruginosa
Descriptor: EscD/YscD/HrpQ family type III secretion system inner membrane ring protein
Authors:Muthuramalingam, M, Lovell, S, Battaile, K.P, Picking, W.D.
Deposit date:2019-09-30
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Structures of SctK and SctD from Pseudomonas aeruginosa Reveal the Interface of the Type III Secretion System Basal Body and Sorting Platform.
J.Mol.Biol., 432, 2020

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