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PDB: 53526 results

7N7V
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BU of 7n7v by Molmil
Crystal structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes at 2 A.
Descriptor: CHLORIDE ION, FE (II) ION, Predicted hydroxylase
Authors:Han, L, Xu, W, Ma, M, Miller, M.D, Shen, B, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2021-06-11
Release date:2022-07-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes.
To Be Published
4TKU
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BU of 4tku by Molmil
Reactivated Nitrogenase MoFe-protein from A. vinelandii
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CHLORIDE ION, FE (II) ION, ...
Authors:Spatzal, T, Perez, K, Einsle, O, Howard, J.B, Rees, D.C.
Deposit date:2014-05-27
Release date:2014-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Ligand binding to the FeMo-cofactor: structures of CO-bound and reactivated nitrogenase.
Science, 345, 2014
6MUV
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BU of 6muv by Molmil
The structure of the Plasmodium falciparum 20S proteasome in complex with two PA28 activators
Descriptor: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ...
Authors:Metcalfe, R.D, Xie, S.C, Hanssen, E, Gillett, D.L, Leis, A.P, Tilley, L, Griffin, M.D.W.
Deposit date:2018-10-23
Release date:2019-08-07
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The structure of the PA28-20S proteasome complex from Plasmodium falciparum and implications for proteostasis.
Nat Microbiol, 4, 2019
6Q45
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BU of 6q45 by Molmil
F1-ATPase from Fusobacterium nucleatum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Petri, J, Nakatani, Y, Montgomery, M.G, Ferguson, S.A, Aragao, D, Leslie, A.G.W, Heikal, A, Walker, J.E, Cook, G.M.
Deposit date:2018-12-05
Release date:2019-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of F1-ATPase from the obligate anaerobe Fusobacterium nucleatum.
Open Biology, 9, 2019
6WCQ
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BU of 6wcq by Molmil
Structure of a substrate-bound DQC ubiquitin ligase
Descriptor: Cullin-1, F-box/LRR-repeat protein 17, Kelch-like ECH-associated protein 1, ...
Authors:Mena, E.L, Jevtic, P, Greber, B.J, Gee, C.L, Lew, B.G, Akopian, D, Nogales, E, Kuriyan, J, Rape, M.
Deposit date:2020-03-31
Release date:2020-08-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Structural basis for dimerization quality control.
Nature, 586, 2020
7N3Z
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BU of 7n3z by Molmil
Crystal Structure of Saccharomyces cerevisiae Apn2 Catalytic Domain
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA-(apurinic or apyrimidinic site) endonuclease 2, ...
Authors:Wojtaszek, J.L, Wallace, B.D, Williams, R.S.
Deposit date:2021-06-02
Release date:2022-09-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Molecular basis for processing of topoisomerase 1-triggered DNA damage by Apn2/APE2.
Cell Rep, 41, 2022
8OJ1
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BU of 8oj1 by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
Descriptor: Auxin response factor, CHLORIDE ION, HA7
Authors:Crespo, I, Weijers, D, Boer, D.R.
Deposit date:2023-03-23
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
To Be Published
6FQJ
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GluA2(flop) G724C ligand binding core dimer bound to ZK200775 at 2.50 Angstrom resolution
Descriptor: Glutamate receptor 2,Glutamate receptor 2, {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid
Authors:Coombs, I.D, Soto, D, Gold, M.G, Farrant, M.F, Cull-Candy, S.G.
Deposit date:2018-02-14
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.500017 Å)
Cite:Homomeric GluA2(R) AMPA receptors can conduct when desensitized.
Nat Commun, 10, 2019
5V6X
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BU of 5v6x by Molmil
Crystal structure of the tRNA binding domain of Pyrrolysyl-tRNA synthetase mutant (32A NTD) bound to tRNA(Pyl)
Descriptor: Pyrrolysine--tRNA ligase, RNA (70-MER), ZINC ION
Authors:Suzuki, T, Soll, D.
Deposit date:2017-03-17
Release date:2017-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal structures reveal an elusive functional domain of pyrrolysyl-tRNA synthetase.
Nat. Chem. Biol., 13, 2017
6ZGM
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BU of 6zgm by Molmil
Crystal Structure of the VIM-2 Acquired Metallo-beta-Lactamase in Complex with the thiazolecarboxylate inhibitor ANT2681
Descriptor: 5-[[4-(carbamimidamidocarbamoylamino)-3,5-bis(fluoranyl)phenyl]sulfonylamino]-1,3-thiazole-4-carboxylic acid, ACETATE ION, Metallo-beta-lactamase VIM-2-like protein, ...
Authors:Docquier, J.D, Pozzi, C, Marcoccia, F, De Luca, F, Benvenuti, M, Mangani, S.
Deposit date:2020-06-19
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:ANT2681: SAR Studies Leading to the Identification of a Metallo-beta-lactamase Inhibitor with Potential for Clinical Use in Combination with Meropenem for the Treatment of Infections Caused by NDM-ProducingEnterobacteriaceae.
Acs Infect Dis., 6, 2020
8P4Q
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BU of 8p4q by Molmil
Structure of the IMP dehydrogenase related protein GUAB3 from Synechocystis PCC 6803
Descriptor: IMP dehydrogenase subunit, INOSINIC ACID, XANTHOSINE-5'-MONOPHOSPHATE
Authors:Hernandez-Gomez, A, Fernandez-Justel, D, Buey, R.M.
Deposit date:2023-05-23
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:GuaB3, an overlooked enzyme in cyanobacteria's toolbox that sheds light on IMP dehydrogenase evolution.
Structure, 31, 2023
3MVR
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BU of 3mvr by Molmil
Crystal Structure of cytochrome P450 2B4-H226Y in a closed conformation
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2010-05-04
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Plasticity of Cytochrome P450 2B4 as Investigated by Hydrogen-Deuterium Exchange Mass Spectrometry and X-ray Crystallography.
J.Biol.Chem., 285, 2010
6Q5P
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BU of 6q5p by Molmil
Crystal structure of a CC-Hex mutant that forms a parallel six-helix coiled coil CC-Hex*-II
Descriptor: CC-Hex*-II, GLYCEROL, PHOSPHATE ION
Authors:Rhys, G.G, Wood, C.W, Beesley, J.L, Brady, R.L, Woolfson, D.N.
Deposit date:2018-12-09
Release date:2019-05-22
Last modified:2019-06-19
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Navigating the Structural Landscape of De Novo alpha-Helical Bundles.
J.Am.Chem.Soc., 141, 2019
6WUE
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BU of 6wue by Molmil
Tetragonal crystal form of SbtB from Synechocystis PCC6803
Descriptor: ISOPROPYL ALCOHOL, Membrane-associated protein slr1513, SODIUM ION
Authors:Bu, G, Simmons, C.R, Nielsen, D.R, Nannenga, B.L.
Deposit date:2020-05-04
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tetragonal crystal form of the cyanobacterial bicarbonate-transporter regulator SbtB from Synechocystis sp. PCC 6803.
Acta Crystallogr.,Sect.F, 76, 2020
5M0I
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BU of 5m0i by Molmil
Crystal structure of the nuclear complex with She2p and the ASH1 mRNA E3-localization element
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ASH1-E3 element, ...
Authors:Edelmann, F.T, Janowski, R, Niessing, D.
Deposit date:2016-10-05
Release date:2017-01-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex.
Nat. Struct. Mol. Biol., 24, 2017
4ZAA
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BU of 4zaa by Molmil
Structure of A. niger Fdc1 in complex with 4-vinyl guaiacol
Descriptor: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, 2-Methoxy-4-vinylphenol, ...
Authors:Payne, K.A.P, Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.242 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
5KKQ
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BU of 5kkq by Molmil
Homo sapiens CCCTC-binding factor (CTCF) ZnF3-7 and DNA complex structure
Descriptor: DNA (5'-D(*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*GP*GP*CP*GP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*CP*CP*CP*CP*CP*TP*GP*CP*TP*GP*GP*C)-3'), Transcriptional repressor CTCF, ...
Authors:Hashimoto, H, Wang, D, Cheng, X.
Deposit date:2016-06-22
Release date:2017-05-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.744 Å)
Cite:Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.
Mol. Cell, 66, 2017
4TKV
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BU of 4tkv by Molmil
CO-bound Nitrogenase MoFe-protein from A. vinelandii
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CARBON MONOXIDE, FE (II) ION, ...
Authors:Spatzal, T, Perez, K, Einsle, O, Howard, J.B, Rees, D.C.
Deposit date:2014-05-28
Release date:2014-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ligand binding to the FeMo-cofactor: structures of CO-bound and reactivated nitrogenase.
Science, 345, 2014
5KJR
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BU of 5kjr by Molmil
Crystal structure of the ADCC-potent antibody N60-i3 Fab in complex with HIV-1 Clade A/E gp120 W69A/S115W mutant and M48U1.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, M48U1 CD4 MIMETIC PEPTIDE, ...
Authors:Tolbert, W.D, Pazgier, M.
Deposit date:2016-06-20
Release date:2016-07-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:A Highly Conserved gp120 Inner Domain Residue Modulates Env Conformation and Trimer Stability.
J.Virol., 90, 2016
8ONW
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BU of 8onw by Molmil
Crystal structure of the hetero-dimeric complex from Archaeoglobus fulgidus PRC1 and PRC2 domains
Descriptor: PRC-barrel domain-containing protein
Authors:Ciziene, D, Bellini, D, Lowe, J.Y.
Deposit date:2023-04-04
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of the hetero-dimeric complex from Archaeoglobus fulgidus PRC1 and PRC2 domains
To Be Published
8OJ2
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BU of 8oj2 by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Auxin response factor, CHLORIDE ION, ...
Authors:Crespo, I, Weijers, D, Boer, D.R.
Deposit date:2023-03-23
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7
To Be Published
8GER
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BU of 8ger by Molmil
E. eligens beta-glucuronidase bound to norquetiapine-glucuronide
Descriptor: 11-(4-beta-D-glucopyranuronosylpiperazin-1-yl)dibenzo[b,f][1,4]thiazepine, Beta-glucuronidase
Authors:Simpson, J.B, Lietzan, A.D, Redinbo, M.R.
Deposit date:2023-03-07
Release date:2024-03-20
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Gut microbial beta-glucuronidases influence endobiotic homeostasis and are modulated by diverse therapeutics.
Cell Host Microbe, 32, 2024
5NP1
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BU of 5np1 by Molmil
Open protomer of human ATM (Ataxia telangiectasia mutated)
Descriptor: Serine-protein kinase ATM
Authors:Baretic, D, Pollard, H.K, Fisher, D.I, Johnson, C.M, Santhanam, B, Truman, C.M, Kouba, T, Fersht, A.R, Phillips, C, Williams, R.L.
Deposit date:2017-04-13
Release date:2017-05-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Structures of closed and open conformations of dimeric human ATM.
Sci Adv, 3, 2017
7ZNY
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BU of 7zny by Molmil
Cryo-EM structure of the canine distemper virus tetrameric attachment glycoprotein
Descriptor: Hemagglutinin glycoprotein
Authors:Kalbermatter, D, Jeckelmann, J.-M, Wyss, M, Plattet, P, Fotiadis, D.
Deposit date:2022-04-23
Release date:2023-02-08
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structure and supramolecular organization of the canine distemper virus attachment glycoprotein.
Proc.Natl.Acad.Sci.USA, 120, 2023
7T1J
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BU of 7t1j by Molmil
Crystal structure of RUBISCO from Rhodospirillaceae bacterium BRH_c57
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
Authors:Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
Deposit date:2021-12-02
Release date:2022-09-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022

225946

數據於2024-10-09公開中

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