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PDB: 53012 results

6CXA
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BU of 6cxa by Molmil
Structure of alpha-GSA[20,6P] bound by CD1d and in complex with the Va14Vb8.2 TCR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin, ...
Authors:Wang, J, Zajonc, D.
Deposit date:2018-04-02
Release date:2019-04-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
8UE9
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BU of 8ue9 by Molmil
Structure of TREK-1CG*:CAT335
Descriptor: CADMIUM ION, HEXADECANE, N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)PALMITAMIDE, ...
Authors:Mondal, A, Lee, H, Minor, D.L.
Deposit date:2023-09-29
Release date:2024-06-26
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Trek-1(S131C mutant) with ML335
To Be Published
6GJ5
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BU of 6gj5 by Molmil
CRYSTAL STRUCTURE OF KRAS G12D (GPPCP) IN COMPLEX WITH 15
Descriptor: (3~{S})-3-[2-[(2~{R})-pyrrolidin-2-yl]-1~{H}-indol-3-yl]-2,3-dihydroisoindol-1-one, GTPase KRas, MAGNESIUM ION, ...
Authors:Kessler, D, Mcconnell, D.M, Mantoulidis, A.
Deposit date:2018-05-16
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Drugging an undruggable pocket on KRAS.
Proc.Natl.Acad.Sci.USA, 116, 2019
7AE3
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BU of 7ae3 by Molmil
Cryo-EM structure of human RNA Polymerase III elongation complex 3
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Girbig, M, Misiaszek, A.D, Vorlaender, M.K, Mueller, C.W.
Deposit date:2020-09-17
Release date:2021-02-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states.
Nat.Struct.Mol.Biol., 28, 2021
5IN8
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BU of 5in8 by Molmil
Crystal structure of Q151H Aspergillus terreus aristolochene synthase
Descriptor: Aristolochene synthase, GLYCEROL, MAGNESIUM ION, ...
Authors:Chen, M, Christianson, D.W.
Deposit date:2016-03-07
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
8UEC
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BU of 8uec by Molmil
Structure of TREK-1CG*:CAT335a
Descriptor: CADMIUM ION, DECANE, HEXADECANE, ...
Authors:Mondal, A, Lee, H, Minor, D.L.
Deposit date:2023-09-30
Release date:2024-06-26
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Trek-1(S131C mutant) with ML335
To Be Published
8UF6
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BU of 8uf6 by Molmil
Structure of Trek-1(K2P2.1) with ML336
Descriptor: CADMIUM ION, DECANE, DODECANE, ...
Authors:Lolicato, M, Mondal, A, Minor, D.L.
Deposit date:2023-10-03
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Trek-1(K2P2.1) with ML336
To Be Published
8FEB
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BU of 8feb by Molmil
Crystal Structure of Porphyromonas gingivalis Sialidase (PG_0352)
Descriptor: CITRATE ANION, DI(HYDROXYETHYL)ETHER, Sialidase, ...
Authors:Clark, N.D, Malkowski, M.G.
Deposit date:2022-12-06
Release date:2023-10-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Functional and structural analyses reveal that a dual domain sialidase protects bacteria from complement killing through desialylation of complement factors.
Plos Pathog., 19, 2023
7AEA
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BU of 7aea by Molmil
Cryo-EM structure of human RNA Polymerase III elongation complex 2
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Girbig, M, Misiaszek, A.D, Vorlaender, M.K, Mueller, C.W.
Deposit date:2020-09-17
Release date:2021-02-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states.
Nat.Struct.Mol.Biol., 28, 2021
7PB4
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BU of 7pb4 by Molmil
Cenp-HIK 3-protein complex
Descriptor: Centromere protein H, Centromere protein I, Centromere protein K
Authors:Bellini, D, Yatskevich, S, Muir, W.K, Barford, D.
Deposit date:2021-07-30
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
5LTW
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BU of 5ltw by Molmil
Complex of human 14-3-3 sigma CLU1 mutant with phosphorylated heat shock protein B6
Descriptor: 14-3-3 protein sigma, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Heat shock protein beta-6, ...
Authors:Sluchanko, N.N, Beelen, S, Kulikova, A.A, Weeks, S.D, Antson, A.A, Gusev, N.B, Strelkov, S.V.
Deposit date:2016-09-07
Release date:2017-02-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structural Basis for the Interaction of a Human Small Heat Shock Protein with the 14-3-3 Universal Signaling Regulator.
Structure, 25, 2017
6PUQ
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BU of 6puq by Molmil
1.56 A crystal structure of flavodoxin-like domain of Schizosaccharomyces japonicus putative tRNAPhe 4-demethylwyosine synthase Tyw1 in complex with FMN
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
Authors:Sjekloca, L, Ferre-D'Amare, A.R.
Deposit date:2019-07-18
Release date:2020-07-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Biochemical and structural characterization of the flavodoxin-like domain of the Schizosaccharomyces japonicus putative tRNAPhe 4-demethylwyosine synthase Tyw1 in complex with FMN.
MicroPubl Biol, 2022, 2022
5MQM
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BU of 5mqm by Molmil
Glycoside hydrolase BT_0986
Descriptor: CALCIUM ION, D-rhamnopyranose tetrazole, Glycosyl hydrolases family 2, ...
Authors:Basle, A, Ndeh, D, Rogowski, A, Cartmell, A, Luis, A.S, Venditto, I, Labourel, A, Gilbert, H.J.
Deposit date:2016-12-20
Release date:2017-03-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Complex pectin metabolism by gut bacteria reveals novel catalytic functions.
Nature, 544, 2017
7BE9
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BU of 7be9 by Molmil
Kashmir bee virus empty particle at acidic pH
Descriptor: Structural polyprotein
Authors:Mukhamedova, L, Plevka, P, Fuzik, T, Hrebik, D.
Deposit date:2021-01-06
Release date:2021-03-10
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Virion structure and in vitro genome release mechanism of dicistrovirus Kashmir bee virus.
J.Virol., 95, 2021
7O5H
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BU of 7o5h by Molmil
Ribosomal methyltransferase KsgA bound to small ribosomal subunit
Descriptor: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Stephan, N.C, Ries, A.B, Boehringer, D, Ban, N.
Deposit date:2021-04-08
Release date:2021-06-16
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of successive adenosine modifications by the conserved ribosomal methyltransferase KsgA.
Nucleic Acids Res., 49, 2021
5EFI
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BU of 5efi by Molmil
Crystal structure of mouse CD1d in complex with the p99p lipopeptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Girardi, E, Wang, J, Zajonc, D.M.
Deposit date:2015-10-23
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of an alpha-Helical Peptide and Lipopeptide Bound to the Nonclassical Major Histocompatibility Complex (MHC) Class I Molecule CD1d.
J.Biol.Chem., 291, 2016
6SU6
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BU of 6su6 by Molmil
Complex between a UDP-glucosyltransferase from Polygonum tinctorium capable of glucosylating indoxyl and UDP-glucose
Descriptor: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Fredslund, F, Teze, D, Svensson, B, Adams, P.D, Welner, D.H.
Deposit date:2019-09-13
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:O-/N-/S-Specificity in Glycosyltransferase Catalysis: From Mechanistic Understanding to Engineering
Acs Catalysis, 11, 2021
6W32
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BU of 6w32 by Molmil
Crystal structure of Sfh5
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Phosphatidylinositol transfer protein SFH5
Authors:Gulten, G, Khan, D, Aggarwal, A, Krieger, I, Sacchettini, J.C, Bankaitis, V.A.
Deposit date:2020-03-08
Release date:2020-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Sec14-like phosphatidylinositol transfer protein paralog defines a novel class of heme-binding proteins.
Elife, 9, 2020
4X7D
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BU of 4x7d by Molmil
Crystal structure of 2012 NSW GII.4 P domain in complex with Nano-85
Descriptor: 1,2-ETHANEDIOL, Nano-85 Nanobody, VP1
Authors:Koromyslova, A.D, Hansman, G.S.
Deposit date:2014-12-09
Release date:2014-12-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Nanobody binding to a conserved epitope promotes norovirus particle disassembly.
J.Virol., 89, 2015
8ERW
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BU of 8erw by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
Descriptor: C2HR4_8r
Authors:Bick, M.J, Parmeggiani, F, Bethel, N.P, Sankaran, B, Baker, D.
Deposit date:2022-10-12
Release date:2023-08-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
7TXD
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BU of 7txd by Molmil
Cryo-EM structure of BG505 SOSIP HIV-1 Env trimer in complex with CD4 receptor (D1D2) and broadly neutralizing darpin bnD.9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Broadly neutralizing darpin bnd.9, ...
Authors:Cerutti, G, Gorman, J, Kwong, P.D, Shapiro, L.
Deposit date:2022-02-08
Release date:2023-04-12
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Trapping the HIV-1 V3 loop in a helical conformation enables broad neutralization.
Nat.Struct.Mol.Biol., 30, 2023
6O36
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BU of 6o36 by Molmil
Crystal structure of human KRAS P34R mutant in complex with GNP
Descriptor: GTPase KRas, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Bera, A.K, Westover, K.D.
Deposit date:2019-02-26
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:GTP hydrolysis is modulated by Arg34 in the RASopathy-associated KRASP34R.
Birth Defects Res, 112, 2020
6NHL
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BU of 6nhl by Molmil
Crystal structure of QueE from Escherichia coli
Descriptor: 7-carboxy-7-deazaguanine synthase, DI(HYDROXYETHYL)ETHER, FE (III) ION, ...
Authors:Grell, T.A.J, Bell, B.N, Nguyen, C, Dowling, D.P, Drennan, C.L.
Deposit date:2018-12-23
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Crystal structure of AdoMet radical enzyme 7-carboxy-7-deazaguanine synthase from Escherichia coli suggests how modifications near [4Fe-4S] cluster engender flavodoxin specificity.
Protein Sci., 28, 2019
6W83
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BU of 6w83 by Molmil
K2P2.1 (TREK-1), 100 mM K+
Descriptor: CADMIUM ION, DECANE, DODECANE, ...
Authors:Lolicato, M, Minor, D.L.
Deposit date:2020-03-20
Release date:2021-01-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.901 Å)
Cite:K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020
6W87
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BU of 6w87 by Molmil
K2P2.1 (TREK-1):ML335 complex, 50 mM K+
Descriptor: CADMIUM ION, DECANE, DODECANE, ...
Authors:Lolicato, M, Minor, D.L.
Deposit date:2020-03-20
Release date:2021-01-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:K 2P channel C-type gating involves asymmetric selectivity filter order-disorder transitions.
Sci Adv, 6, 2020

223166

數據於2024-07-31公開中

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