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PDB: 52974 件

1JMW
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Propagating Conformational Changes Over Long (And Short) Distances
分子名称: methyl-accepting chemotaxis protein II
著者Koshland Jr, D.E, Yu, E.W.
登録日2001-07-20
公開日2001-08-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Propagating conformational changes over long (and short) distances in proteins.
Proc.Natl.Acad.Sci.USA, 98, 2001
4IOY
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Structure of the Spt16 Middle Domain Reveals Functional Features of the Histone Chaperone FACT
分子名称: FACT complex subunit SPT16, PHOSPHATE ION
著者Kemble, D.J, Hill, C.P.
登録日2013-01-08
公開日2013-02-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.945 Å)
主引用文献Structure of the Spt16 Middle Domain Reveals Functional Features of the Histone Chaperone FACT.
J.Biol.Chem., 288, 2013
6VVE
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Legionella pneumophila Lpg2603 kinase bound to IP6, Mn2+, and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Dot/Icm T4SS effector, INOSITOL HEXAKISPHOSPHATE, ...
著者Tomchick, D.R, Tagliabracci, V.S, Park, B.C.
登録日2020-02-17
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献ALegionellaeffector kinase is activated by host inositol hexakisphosphate.
J.Biol.Chem., 295, 2020
1SSW
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Crystal structure of phage T4 lysozyme mutant Y24A/Y25A/T26A/I27A/C54T/C97A
分子名称: BETA-MERCAPTOETHANOL, Lysozyme
著者He, M.M, Baase, W.A, Xiao, H, Heinz, D.W, Matthews, B.W.
登録日2004-03-24
公開日2004-10-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Alanine-scanning mutagenesis of the beta-sheet region of phage T4 lysozyme suggests that tertiary context has a dominant effect on beta-sheet formation
Protein Sci., 13, 2004
4IOH
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Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR258
分子名称: Tll1086 protein
著者Vorobiev, S, Su, M, Seetharaman, J, Maglaqui, M, Xiao, X, Kohan, E, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2013-01-07
公開日2013-01-30
最終更新日2013-11-20
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus.
To be Published
7ZQA
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VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
分子名称: VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR
著者Kingston, N.J, Grehan, K, Snowden, J.S, Alzahrani, J, Ranson, N.A, Rowlands, D.J, Stonehouse, N.J.
登録日2022-04-29
公開日2023-01-18
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献VelcroVax: a "Bolt-On" Vaccine Platform for Glycoprotein Display.
Msphere, 8, 2023
4R4Q
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Crystal structure of RPA70N in complex with 5-(3-((N-(4-(5-carboxyfuran-2-yl)benzyl)acetamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
分子名称: 5-[4-({acetyl[4-(5-carboxyfuran-2-yl)benzyl]amino}methyl)phenyl]-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid, Replication protein A 70 kDa DNA-binding subunit
著者Feldkamp, M.D, Waterson, A.G, Kennedy, J.P, Patrone, J.D, Pelz, N.F, Frank, A.O, Vangamudi, B, Sousa-Fagundes, E.M, Rossanese, O.W, Fesik, S.W, Chazin, W.J.
登録日2014-08-19
公開日2014-11-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Diphenylpyrazoles as replication protein a inhibitors.
ACS Med Chem Lett, 6, 2015
1JKT
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TETRAGONAL CRYSTAL FORM OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE
分子名称: DEATH-ASSOCIATED PROTEIN KINASE
著者Tereshko, V, Teplova, M, Brunzelle, J, Watterson, D.M, Egli, M.
登録日2001-07-13
公開日2002-04-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structures of the catalytic domain of human protein kinase associated with apoptosis and tumor suppression.
Nat.Struct.Biol., 8, 2001
5K1B
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Crystal structure of the UAF1/USP12 complex in F222 space group
分子名称: Ubiquitin carboxyl-terminal hydrolase 12, WD repeat-containing protein 48, ZINC ION
著者Li, H, D'Andrea, A.D, Zheng, N.
登録日2016-05-18
公開日2016-07-20
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20.
Mol.Cell, 63, 2016
1TK9
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Crystal Structure of Phosphoheptose isomerase 1
分子名称: Phosphoheptose isomerase 1
著者Rajashankar, K.R, Solorzano, V, Kniewel, R, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2004-06-08
公開日2004-06-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of two putative phosphoheptose isomerases.
Proteins, 63, 2006
6VYD
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Terpenoid Cyclase FgGS in Complex with Mg, Inorganic Pyrophosphate, and Benzyltriethylammonium cation
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2020-02-26
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Discovery of the cryptic function of terpene cyclases as aromatic prenyltransferases.
Nat Commun, 11, 2020
1TLB
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Yeast coproporphyrinogen oxidase
分子名称: Coproporphyrinogen III oxidase, SULFATE ION
著者Phillip, J.D, Whitby, F.G, Warby, C.A, Labbe, P, Yang, C, Pflugrath, J.W, Ferrara, J.D, Robinson, H, Kushner, J.P, Hill, C.P.
登録日2004-06-09
公開日2004-07-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the oxygen-dependent coproporphyrinogen oxidase (Hem13p) of Saccharomyces cerevisiae
J.Biol.Chem., 279, 2004
5KEV
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Vibrio parahaemolyticus VtrA/VtrC complex
分子名称: SULFATE ION, VtrA Protein, VtrC Protein
著者Tomchick, D.R, Orth, K, Rivera-Cancel, G.
登録日2016-06-10
公開日2016-07-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Bile salt receptor complex activates a pathogenic type III secretion system.
Elife, 5, 2016
7B4J
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Thermostable omega transaminase PjTA-R6 variant W58M/F86L/R417L engineered for asymmetric synthesis of enantiopure bulky amines
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aspartate aminotransferase family protein, SUCCINIC ACID
著者Capra, N, Rozeboom, H.J, Thunnissen, A.M.W.H, Janssen, D.B.
登録日2020-12-02
公開日2021-09-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Computational Redesign of an omega-Transaminase from Pseudomonas jessenii for Asymmetric Synthesis of Enantiopure Bulky Amines.
Acs Catalysis, 11, 2021
1T2B
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Crystal Structure of cytochrome P450cin complexed with its substrate 1,8-cineole
分子名称: 1,3,3-TRIMETHYL-2-OXABICYCLO[2.2.2]OCTANE, P450cin, PROTOPORPHYRIN IX CONTAINING FE
著者Meharenna, Y.T, Li, H, Hawkes, D.B, Pearson, A.G, De Voss, J, Poulos, T.L.
登録日2004-04-20
公開日2005-04-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of P450cin in a complex with its substrate, 1,8-cineole, a close structural homologue to D-camphor, the substrate for P450cam
Biochemistry, 43, 2004
1T35
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN YVDD- A PUTATIVE LYSINE DECARBOXYLASE
分子名称: HYPOTHETICAL PROTEIN YVDD, Putative Lysine Decarboxylase, SULFATE ION
著者Rajashankar, K.R, Kniewel, R, Solorzano, V, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2004-04-23
公開日2004-05-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Crystal Structure of a Hypothetical Protein Yvdd - Putative Lysine Decarboxylase
To be Published
3EDZ
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Crystal structure of catalytic domain of TACE with hydroxamate inhibitor
分子名称: ADAM 17, CITRIC ACID, N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-3-methyl-L-valyl-N-(2-aminoethyl)-L-alaninamide, ...
著者Mazzola, R.D, Zhu, Z, Sinning, L, McKittrick, B, Lavey, B, Spitler, J, Kozlowski, J, Neng-Yang, S, Zhou, G, Guo, Z, Orth, P, Madison, V, Sun, J, Lundell, D, Niu, X.
登録日2008-09-03
公開日2008-09-23
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of novel hydroxamates as highly potent tumor necrosis factor-alpha converting enzyme inhibitors. Part II: optimization of the S3' pocket.
Bioorg.Med.Chem.Lett., 18, 2008
4IC0
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Crystal Structure of PAI-1 in Complex with Gallate
分子名称: 3,4,5-trihydroxybenzoic acid, Plasminogen activator inhibitor 1
著者Hong, Z.B, Lin, Z.H, Gong, L.H, Huang, M.D.
登録日2012-12-09
公開日2013-12-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal Structure of PAI-1 in Complex with Gallate
To be Published
7B4I
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Thermostable omega transaminase PjTA-R6 variant W58G engineered for asymmetric synthesis of enantiopure bulky amines
分子名称: Aspartate aminotransferase family protein, PYRIDOXAL-5'-PHOSPHATE, SUCCINIC ACID
著者Capra, N, Rozeboom, H.J, Thunnissen, A.M.W.H, Janssen, D.B.
登録日2020-12-02
公開日2021-09-01
最終更新日2021-09-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Computational Redesign of an omega-Transaminase from Pseudomonas jessenii for Asymmetric Synthesis of Enantiopure Bulky Amines.
Acs Catalysis, 11, 2021
6W1Z
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ClpAP Engaged1 State bound to RepA-GFP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ...
著者Lopez, K.L, Rizo, A.N, Tse, E, Lin, J, Scull, N.W, Thwin, A.C, Lucius, A.L, Shorter, J, Southworth, D.R.
登録日2020-03-04
公開日2020-05-06
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Conformational plasticity of the ClpAP AAA+ protease couples protein unfolding and proteolysis.
Nat.Struct.Mol.Biol., 27, 2020
6IGQ
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Crystal structure of inactive state of S9 peptidase from Deinococcus radiodurans R1 (PMSF treated)
分子名称: Acyl-peptide hydrolase, putative, GLYCEROL, ...
著者Yadav, P, Goyal, V.D, Kumar, A, Makde, R.D.
登録日2018-09-25
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
6W26
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Terpenoid Cyclase FgGS in Complex with Mg, Inorganic Pyrophosphate, and Imidazole
分子名称: 1,2-ETHANEDIOL, GLYCEROL, IMIDAZOLE, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2020-03-05
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of the cryptic function of terpene cyclases as aromatic prenyltransferases.
Nat Commun, 11, 2020
6W3G
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Rd1NTF2_04 with long sheet
分子名称: Rd1NTF2_04
著者Bick, M.J, Basanta, B, Sankaran, B, Baker, D.
登録日2020-03-09
公開日2020-04-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献An enumerative algorithm for de novo design of proteins with diverse pocket structures.
Proc.Natl.Acad.Sci.USA, 117, 2020
1JYT
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Solution structure of olfactory marker protein from rat
分子名称: Olfactory Marker Protein
著者Baldisseri, D.M, Margolis, J.W, Weber, D.J, Koo, J.H, Margolis, F.M.
登録日2001-09-13
公開日2001-10-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Olfactory marker protein (OMP) exhibits a beta-clam fold in solution: implications for target peptide interaction and olfactory signal transduction.
J.Mol.Biol., 319, 2002
8A9B
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Single Particle cryo-EM of the empty lipid binding protein P116 (MPN213) from Mycoplasma pneumoniae at 4 Angstrom resolution
分子名称: Lipid binding protein P116 (MPN213)
著者Sprankel, L, Vizarraga, D.
登録日2022-06-28
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Essential protein P116 extracts cholesterol and other indispensable lipids for Mycoplasmas.
Nat.Struct.Mol.Biol., 30, 2023

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