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PDB: 53266 件

5A56
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The structure of GH101 from Streptococcus pneumoniae TIGR4 in complex with 1-O-methyl-T-antigen
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CITRIC ACID, ...
著者Gregg, K.J, Suits, M.D.L, Deng, L, Vocadlo, D.J, Boraston, A.B.
登録日2015-06-16
公開日2015-09-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Analysis of a Family 101 Glycoside Hydrolase in Complex with Carbohydrates Reveals Insights into Its Mechanism.
J.Biol.Chem., 290, 2015
6ZDQ
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BU of 6zdq by Molmil
Structure of telomerase from Candida albicans in complexe with TWJ fragment of telomeric RNA
分子名称: RNA, Telomerase reverse transcriptase
著者Zhai, L, Rety, S, Chen, W.F, Auguin, D, Xi, X.G.
登録日2020-06-15
公開日2021-04-28
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Crystal structures of N-terminally truncated telomerase reverse transcriptase from fungi‡.
Nucleic Acids Res., 49, 2021
8TYX
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BU of 8tyx by Molmil
Structure of a bacterial Ubl-deubiquitinase complex (form 1)
分子名称: DUB(BilC) E33A Mutant, Ubl(BilA), ZINC ION
著者Ye, Q, Gong, M, Corbett, K.D.
登録日2023-08-26
公開日2024-06-12
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献A eukaryotic-like ubiquitination system in bacterial antiviral defence.
Nature, 631, 2024
6ZD1
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BU of 6zd1 by Molmil
Structure of apo telomerase from Candida Tropicalis
分子名称: Telomerase reverse transcriptase
著者Zhai, L, Rety, S, Chen, W.F, Auguin, D, Xi, X.G.
登録日2020-06-13
公開日2021-04-28
最終更新日2021-05-12
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystal structures of N-terminally truncated telomerase reverse transcriptase from fungi‡.
Nucleic Acids Res., 49, 2021
5A63
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BU of 5a63 by Molmil
Cryo-EM structure of the human gamma-secretase complex at 3.4 angstrom resolution.
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bai, X, Yan, C, Yang, G, Lu, P, Ma, D, Sun, L, Zhou, R, Scheres, S.H.W, Shi, Y.
登録日2015-06-24
公開日2015-08-05
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献An Atomic Structure of Human Gamma-Secretase
Nature, 525, 2015
6ZD6
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BU of 6zd6 by Molmil
Structure of apo telomerase from Candida Tropicalis
分子名称: Telomerase reverse transcriptase
著者Zhai, L, Rety, S, Chen, W.F, Auguin, D, Xi, X.G.
登録日2020-06-13
公開日2021-04-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Crystal structures of N-terminally truncated telomerase reverse transcriptase from fungi‡.
Nucleic Acids Res., 49, 2021
8TSO
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BU of 8tso by Molmil
KDL bound, nucleotide-free MsbA in open, outward-facing conformation
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-binding transport protein MsbA, PENTAETHYLENE GLYCOL MONODECYL ETHER
著者Yang, B, Zhang, T, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2023-08-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Native mass spectrometry captures snapshots of the MsbA transport cycle
To Be Published
8D9Z
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BU of 8d9z by Molmil
Crystal structure of Cobra alpha-neurotoxin in complex with Centi-LNX-D09 antibody
分子名称: ACETATE ION, Centi-LNX-D09 Fab heavy chain, Centi-LNX-D09 Fab light chain, ...
著者Pletnev, S, Verardi, R, Tully, E.S, Glanville, J, Kwong, P.D.
登録日2022-06-12
公開日2023-06-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Venom protection by antibody from a snakebite hyperimmune subject
To Be Published
7A0S
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BU of 7a0s by Molmil
50S Deinococcus radiodurans ribosome bounded with mycinamicin I
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Breiner, E, Eyal, Z, Matzov, D, Halfon, Y, Cimicata, G, Rozenberg, H, Zimmerman, E, Bashan, A, Yonath, A.
登録日2020-08-10
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Ribosome-binding and anti-microbial studies of the mycinamicins, 16-membered macrolide antibiotics from Micromonospora griseorubida.
Nucleic Acids Res., 49, 2021
5JJK
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BU of 5jjk by Molmil
Rho transcription termination factor bound to rA7 and 6 ADP-BeF3 molecules
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M.
登録日2016-04-24
公開日2016-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5JVG
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BU of 5jvg by Molmil
The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S ribosomal RNA, 50S ribosomal protein L11, ...
著者Krupkin, M, Wekselman, I, Matzov, D, Eyal, Z, Diskin Posner, Y, Rozenberg, H, Zimmerman, E, Bashan, A, Yonath, A.
登録日2016-05-11
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.428 Å)
主引用文献Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding.
Proc.Natl.Acad.Sci.USA, 113, 2016
5LVM
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BU of 5lvm by Molmil
Human PDK1 Kinase Domain in Complex with Adenine Bound to the ATP-Binding Site
分子名称: 3-phosphoinositide-dependent protein kinase 1, ADENINE, DITHIANE DIOL
著者Schulze, J.O, Saladino, G, Busschots, K, Neimanis, S, Suess, E, Odadzic, D, Zeuzem, S, Hindie, V, Herbrand, A.K, Lisa, M.N, Alzari, P.M, Gervasio, F.L, Biondi, R.M.
登録日2016-09-14
公開日2016-10-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Bidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase.
Cell Chem Biol, 23, 2016
6YWF
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BU of 6ywf by Molmil
Crystal structure of Paradendryphiella salina PL7A alginate lyase
分子名称: Alginate lyase (PL7)
著者Wilkens, C, Fredslund, F, Welner, D.H.
登録日2020-04-29
公開日2021-05-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Paradendryphiella salina PL7A alginate lyase
To Be Published
5CGO
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BU of 5cgo by Molmil
Structure of quasiracemic Ala-Magainin 2 with a beta amino acid substitution at position 13
分子名称: ACPC-13 derivative of Ala-Magainin 2, D-Ala-Magainin 2
著者Hayouka, Z, Thomas, N.C, Mortenson, D.E, Satyshur, K.A, Weisblum, B, Forest, K.T, Gellman, S.H.
登録日2015-07-09
公開日2015-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Quasiracemate Crystal Structures of Magainin 2 Derivatives Support the Functional Significance of the Phenylalanine Zipper Motif.
J.Am.Chem.Soc., 137, 2015
7ACJ
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BU of 7acj by Molmil
Structure of translocated trans-translation complex on E. coli stalled ribosome.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
登録日2020-09-11
公開日2021-08-18
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
6QAQ
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BU of 6qaq by Molmil
ERK2 mini-fragment binding
分子名称: Mitogen-activated protein kinase 1, SULFATE ION, thiophen-3-ylmethylazanium
著者O'Reilly, M, Cleasby, A, Davies, T.G, Hall, R, Ludlow, F, Murray, C.W, Tisi, D, Jhoti, H.
登録日2018-12-19
公開日2019-03-27
最終更新日2019-05-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design.
Drug Discov Today, 24, 2019
1BL9
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BU of 1bl9 by Molmil
CONFORMATIONAL CHANGES OCCURRING UPON REDUCTION IN NITRITE REDUCTASE FROM PSEUDOMONAS AERUGINOSA
分子名称: HEME C, HEME D, HYDROXIDE ION, ...
著者Nurizzo, D, Cambillau, C, Tegoni, M.
登録日1998-07-20
公開日1999-04-27
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Conformational changes occurring upon reduction and NO binding in nitrite reductase from Pseudomonas aeruginosa.
Biochemistry, 37, 1998
7ADF
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BU of 7adf by Molmil
SFX structure of dehaloperoxidase B in the ferric form
分子名称: Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Moreno Chicano, T, Ebrahim, A.E, Axford, D.A, Sherrell, D.A, Sugimoto, H, Tono, K, Owada, S, Worrall, J.W, Strange, R.W, Owen, R.L, Hough, M.A.
登録日2020-09-14
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献SFX structure of dehaloperoxidase B in the ferric form
to be published
7A8Q
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BU of 7a8q by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-654
分子名称: 1,2-ETHANEDIOL, 2-cycloheptyl-5-[4-methoxy-3-[[4-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]methoxy]phenyl]-4,4-dimethyl-pyrazolidin-3-one, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Singh, A.K, Blaazer, A.R, Zara, L, de Esch, I.J.P, Leurs, R, Brown, D.G.
登録日2020-08-30
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献hPDE4D2 structure with inhibitor NPD-654
To be published
8TYY
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BU of 8tyy by Molmil
Structure of a bacterial Ubl-deubiquitinase complex (form 2)
分子名称: DUB(BilC) E33A Mutant, Ubl(BilA), ZINC ION
著者Ye, Q, Gong, M, Corbett, K.D.
登録日2023-08-26
公開日2024-06-12
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A eukaryotic-like ubiquitination system in bacterial antiviral defence.
Nature, 631, 2024
7A9V
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BU of 7a9v by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-635
分子名称: 1,2-ETHANEDIOL, 1-cycloheptyl-3-[4-methoxy-3-(2-phenylethoxy)phenyl]-4,4-dimethyl-4,5-dihydro-1H-pyrazol-5-one, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Singh, A.K, Blaazer, A.R, Zara, L, de Esch, I.J.P, Leurs, R, Brown, D.G.
登録日2020-09-02
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献hPDE4D2 structure with inhibitor NPD-635
To be published
8D78
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BU of 8d78 by Molmil
Crystal structure of a Ba stabilized four-tetrad, parallel Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
分子名称: BARIUM ION, DNA (5'-D(*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN
著者Chen, E.V, Beseiso, D, Yatsunyk, L.A.
登録日2022-06-07
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published
7ABZ
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BU of 7abz by Molmil
Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
登録日2020-09-09
公開日2021-08-18
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
7ACP
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BU of 7acp by Molmil
Serial synchrotron structure of dehaloperoxidase B
分子名称: Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Moreno Chicano, T, Ebrahim, A.E, Axford, D.A, Sherrell, D.A, Worrall, J.W, Strange, R.W, Owen, R.L, Hough, M.A.
登録日2020-09-11
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献SFX structure of dehaloperoxidase B in the ferric form
to be published
5LZK
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BU of 5lzk by Molmil
Structure of the domain of unknown function DUF1669 from human FAM83B
分子名称: 1,2-ETHANEDIOL, IODIDE ION, Protein FAM83B
著者Pinkas, D.M, Bufton, J.C, Williams, E.P, Shrestha, L, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A, Structural Genomics Consortium (SGC)
登録日2016-09-29
公開日2016-10-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.575 Å)
主引用文献Structure of the domain of unknown function DUF1669 from human FAM83B
To Be Published

224572

件を2024-09-04に公開中

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