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PDB: 53012 件

8CRS
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CryoEM Structure of nitrogenase MoFe-protein in detergent
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CHAPSO, FE (III) ION, ...
著者Warmack, R.A, Rees, D.C.
登録日2022-05-11
公開日2023-03-08
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.04 Å)
主引用文献Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
5LDD
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BU of 5ldd by Molmil
Crystal structure of the heterodimeric GEF Mon1-Ccz1 in complex with Ypt7
分子名称: Ccz1, Mon1, Rab small monomeric GTPase-like protein, ...
著者Kiontke, S, Kuemmel, D.
登録日2016-06-24
公開日2017-01-18
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.496 Å)
主引用文献Architecture and mechanism of the late endosomal Rab7-like Ypt7 guanine nucleotide exchange factor complex Mon1-Ccz1.
Nat Commun, 8, 2017
7AV7
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BU of 7av7 by Molmil
Crystal structure of S-nitrosylated nitrosoglutathione reductase(GSNOR)from Chlamydomonas reinhardtii, in complex with NAD+
分子名称: CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, S-(hydroxymethyl)glutathione dehydrogenase, ...
著者Fermani, S, Zaffagnini, M, Falini, G, Lemaire, S.D.
登録日2020-11-04
公開日2020-12-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional insights into nitrosoglutathione reductase from Chlamydomonas reinhardtii.
Redox Biol, 38, 2020
8SY3
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Copper Complex of Peanut USP-type BURP Domain Peptide Cyclase
分子名称: BURP domain-containing protein, COPPER (II) ION
著者Mydy, L.S, Kersten, R.D, Smith, J.L.
登録日2023-05-24
公開日2024-02-14
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献An intramolecular macrocyclase in plant ribosomal peptide biosynthesis.
Nat.Chem.Biol., 20, 2024
8EV1
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Dual Modulators
分子名称: (3aR,4S,9bS)-4-(4-hydroxyphenyl)-2,3,3a,4,5,9b-hexahydro-1H-cyclopenta[c]quinoline-8-sulfonamide, (3aS,4R,9bR)-4-(4-hydroxyphenyl)-2,3,3a,4,5,9b-hexahydro-1H-cyclopenta[c]quinoline-8-sulfonamide, Estrogen Receptor, ...
著者Tinivella, A, Nwachukwu, J.C, Angeli, A, Foschi, F, Benatti, A.L, Pinzi, L, Izard, T, Ferraroni, M, Rangarajan, E.S, Christodoulou, M, Passarella, D, Supuran, C, Nettles, K.W, Rastelli, G.
登録日2022-10-19
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Design, synthesis, biological evaluation and crystal structure determination of dual modulators of carbonic anhydrases and estrogen receptors.
Eur.J.Med.Chem., 246, 2022
6F9G
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Ligand binding domain of P. putida KT2440 polyamine chemorecpetors McpU in complex putrescine.
分子名称: 1,4-DIAMINOBUTANE, ACETATE ION, GLYCEROL, ...
著者Gavira, J.A, Conejero-Muriel, M.T, Ortega, A, Martin-Mora, D, Corral-Lugo, A, Morel, B, Krell, T.
登録日2017-12-14
公開日2018-03-28
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (2.388 Å)
主引用文献Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida.
J. Mol. Biol., 430, 2018
4XVS
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BU of 4xvs by Molmil
Crystal structure of HIV-1 donor 45 d45-01dG5 coreE gp120 with antibody 45-VRC01.H01+07.O-863513/45-VRC01.L01+07.O-110653 (VRC07_1995)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 45-VRC01.H01+07.O-863513/45-VRC01.L01+07.O-110653 Light chain, Donor 45 01dG5 coreE gp120, ...
著者Joyce, M.G, Mascola, J.R, Kwong, P.D.
登録日2015-01-27
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Maturation and Diversity of the VRC01-Antibody Lineage over 15 Years of Chronic HIV-1 Infection.
Cell, 161, 2015
8EV2
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Dual Modulators
分子名称: (3aS,4R,9bR)-4-(2-chloro-4-hydroxyphenyl)-2,3,3a,4,5,9b-hexahydro-1H-cyclopenta[c]quinoline-8-sulfonamide, (3~{a}~{R},4~{S},9~{b}~{S})-4-(2-chloranyl-4-oxidanyl-phenyl)-2,3,3~{a},4,5,9~{b}-hexahydro-1~{H}-cyclopenta[c]quinoline-8-sulfonamide, Estrogen receptor, ...
著者Tinivella, A, Nwachukwu, J.C, Angeli, A, Foschi, F, Benatti, A.L, Pinzi, L, Izard, T, Ferraroni, M, Rangarajan, E.S, Christodoulou, M, Passarella, D, Supuran, C, Nettles, K.W, Rastelli, G.
登録日2022-10-19
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Design, synthesis, biological evaluation and crystal structure determination of dual modulators of carbonic anhydrases and estrogen receptors.
Eur.J.Med.Chem., 246, 2022
7KEJ
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BDBV-289 bound to EBOV GPdMuc Makona
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab heavy chain (HC) BDBV-289, Antibody Fab light chain (LC) BDBV-289, ...
著者Murin, C.D, Ward, A.B.
登録日2020-10-11
公開日2021-06-23
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Convergence of a common solution for broad ebolavirus neutralization by glycan cap-directed human antibodies.
Cell Rep, 35, 2021
6OPS
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BU of 6ops by Molmil
HIV-1 Protease NL4-3 WT in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease NL4-3
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Leidner, F, Nachum, G.S, Nalivaika, E.A, Bolon, D.N.A, KurtYilmaz, N, Schiffer, C.A.
登録日2019-04-25
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.
Acs Chem.Biol., 14, 2019
6OPW
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HIV-1 Protease NL4-3 I13V, G16E, V32I, L33F, K45I, M46I, A71V, V82F, I84V Mutant in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease NL4-3, SULFATE ION
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Leidner, F, Nachum, G.S, Nalivaika, E.A, Bolon, D.N.A, KurtYilmaz, N, Schiffer, C.A.
登録日2019-04-25
公開日2019-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.
Acs Chem.Biol., 14, 2019
8GLO
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BU of 8glo by Molmil
Haemophilus parainfluenzae Holo HphA
分子名称: CHLORIDE ION, HEME B/C, Hemophilin
著者Shin, H.E, Ng, D, Moraes, T.F.
登録日2023-03-22
公開日2024-03-27
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.937 Å)
主引用文献Prevalence of Slam-dependent hemophilins in Gram-negative bacteria.
J.Bacteriol., 206, 2024
6MI3
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BU of 6mi3 by Molmil
Structure of NEMO(51-112) with N- and C-terminal coiled-coil adaptors.
分子名称: NF-kB ESSENTIAL MODULATOR,NF-kappa-B essential modulator,NF-kB ESSENTIAL MODULATOR
著者Pellegrini, M, Barczewski, A.H, Mierke, D.F, Ragusa, M.J.
登録日2018-09-19
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.783 Å)
主引用文献The IKK-binding domain of NEMO is an irregular coiled coil with a dynamic binding interface.
Sci Rep, 9, 2019
6OV0
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BU of 6ov0 by Molmil
Crystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6
分子名称: RNA (5'-R(*AP*AP*AP*(A23))-3'), Uncharacterized protein
著者Jia, N, Patel, D.J.
登録日2019-05-06
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献CRISPR-Cas III-A Csm6 CARF Domain Is a Ring Nuclease Triggering Stepwise cA4Cleavage with ApA>p Formation Terminating RNase Activity.
Mol.Cell, 75, 2019
6EW7
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BU of 6ew7 by Molmil
Crystal structure of the BCL6 BTB domain in complex with anilinopyrimidine ligand
分子名称: 2-chloranyl-4-[[5-chloranyl-4-[(4-fluorophenyl)amino]pyrimidin-2-yl]amino]benzoic acid, B-cell lymphoma 6 protein, CHLORIDE ION
著者Robb, G, Ferguson, A, Hargreaves, D.
登録日2017-11-03
公開日2018-10-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of a Novel B-Cell Lymphoma 6 (BCL6) PROTAC To Provide Insight into Small Molecule Targeting of BCL6.
ACS Chem. Biol., 13, 2018
6UW1
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BU of 6uw1 by Molmil
The crystal structure of FbiA from Mycobacterium Smegmatis, Fo bound form
分子名称: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, CALCIUM ION, Phosphoenolpyruvate transferase
著者Grinter, R, Gillett, D, Cordero, P.R.F, Greening, C.
登録日2019-11-04
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Cellular and Structural Basis of Synthesis of the Unique Intermediate Dehydro-F420-0 in Mycobacteria.
mSystems, 5, 2020
6MJC
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BU of 6mjc by Molmil
Structure of Candida glabrata Csm1:Dsn1(43-67DD) complex
分子名称: Kinetochore-associated protein DSN1, Monopolin complex subunit CSM1
著者Singh, N, Corbett, K.D.
登録日2018-09-20
公開日2018-11-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The molecular basis of monopolin recruitment to the kinetochore.
Chromosoma, 128, 2019
5J8D
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BU of 5j8d by Molmil
Structure of nitroreductase from E. cloacae complexed with nicotinic acid adenine dinucleotide
分子名称: FLAVIN MONONUCLEOTIDE, NICOTINIC ACID ADENINE DINUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
著者Haynes, C.A, Koder, R.L, Miller, A.F, Rodgers, D.W.
登録日2016-04-07
公開日2017-05-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism-Informed Refinement Reveals Altered Substrate-Binding Mode for Catalytically Competent Nitroreductase.
Structure, 25, 2017
8F1B
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BU of 8f1b by Molmil
Structure of zinc-bound ZrgA deletion 124-184 from Vibrio cholerae
分子名称: TRIETHYLENE GLYCOL, ZINC ION, Zinc-binding protein
著者Valencia, D.W, Yukl, E.T.
登録日2022-11-04
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structure and Function of the Zinc Binding Protein ZrgA from Vibrio cholerae.
Int J Mol Sci, 24, 2022
8EZW
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BU of 8ezw by Molmil
Structure of Apo ZrgA deletion 124-184 from Vibrio cholerae
分子名称: TRIETHYLENE GLYCOL, Zinc-binding protein
著者Valencia, D.W, Yukl, E.T.
登録日2022-11-01
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and Function of the Zinc Binding Protein ZrgA from Vibrio cholerae.
Int J Mol Sci, 24, 2022
6MQT
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BU of 6mqt by Molmil
HRAS G12S in complex with GDP
分子名称: GTPase HRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Bera, A.K, Westover, K.D.
登録日2018-10-10
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献HRAS G12S in complex with GDP
To Be Published
8EKH
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BU of 8ekh by Molmil
I-2 Y35N H35N (unbound) Fab from CH65-CH67 lineage
分子名称: I-2 Fab heavy chain, I-2 Fab light chain
著者Maurer, D.P, Schmidt, A.G.
登録日2022-09-21
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody.
Elife, 12, 2023
6F3J
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BU of 6f3j by Molmil
The crystal structure of Glycogen Phosphorylase in complex with 10a
分子名称: 4-[4-[5-[(2~{S},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]-4~{H}-1,2,4-triazol-3-yl]phenyl]benzoic acid, Glycogen phosphorylase, muscle form, ...
著者Kyriakis, E, Stamati, E.C.V, Stravodimos, G.A, Skamnaki, V.T, Leonidas, D.D.
登録日2017-11-28
公開日2018-02-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A multidisciplinary study of 3-( beta-d-glucopyranosyl)-5-substituted-1,2,4-triazole derivatives as glycogen phosphorylase inhibitors: Computation, synthesis, crystallography and kinetics reveal new potent inhibitors.
Eur J Med Chem, 147, 2018
8EOA
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BU of 8eoa by Molmil
Cryo-EM structure of human HSP90B-AIPL1 complex
分子名称: Aryl-hydrocarbon-interacting protein-like 1, Heat shock protein HSP 90-beta, MAGNESIUM ION, ...
著者Srivastava, D, Artemyev, N.O.
登録日2022-10-02
公開日2023-01-25
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Unique interface and dynamics of the complex of HSP90 with a specialized cochaperone AIPL1.
Structure, 31, 2023
6UQE
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BU of 6uqe by Molmil
ClpA/ClpP Disengaged State bound to RepA-GFP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease proteolytic subunit, ...
著者Lopez, K.L, Rizo, A.R, Southworth, D.R.
登録日2019-10-18
公開日2020-04-22
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Conformational plasticity of the ClpAP AAA+ protease couples protein unfolding and proteolysis.
Nat.Struct.Mol.Biol., 27, 2020

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