6F9G

Ligand binding domain of P. putida KT2440 polyamine chemorecpetors McpU in complex putrescine.

Summary for 6F9G

DescriptorMethyl-accepting chemotaxis protein McpU, 1,4-DIAMINOBUTANE, GLYCEROL, ... (5 entities in total)
Functional Keywordsligand binding domain, signaling protein, chemotactic transducer
Biological sourcePseudomonas putida KT2440
Total number of polymer chains5
Total molecular weight174683.53
Authors
Gavira, J.A.,Conejero-Muriel, M.T.,Ortega, A.,Martin-Mora, D.,Corral-Lugo, A.,Morel, B.,Krell, T. (deposition date: 2017-12-14, release date: 2018-03-28, Last modification date: 2018-06-13)
Primary citation
Gavira, J.A.,Ortega, A.,Martin-Mora, D.,Conejero-Muriel, M.T.,Corral-Lugo, A.,Morel, B.,Matilla, M.A.,Krell, T.
Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida.
J. Mol. Biol., 430:1950-1963, 2018
PubMed: 29758259 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2018.05.008
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.388 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.23470.2%2.7%3.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6f9g
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Molmil generated image of 6f9g
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Molmil generated image of 6f9g
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More Biological unit images

Molmil generated image of 6f9g
no rotation
Molmil generated image of 6f9g
rotated about x axis by 90°
Molmil generated image of 6f9g
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6f9g.pdb5.gz [94.27 KB])
Coordinate files for Biological unit (6f9g.pdb4.gz [94.97 KB])
Coordinate files for Biological unit (6f9g.pdb3.gz [94.51 KB])
Coordinate files for Biological unit (6f9g.pdb2.gz [93.75 KB])
Coordinate files for Biological unit (6f9g.pdb1.gz [93.98 KB])