Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52974 件

6MKH
DownloadVisualize
BU of 6mkh by Molmil
Crystal structure of pencillin binding protein 4 (PBP4) from Enterococcus faecalis in the imipenem-bound form
分子名称: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, PHOSPHATE ION, pencillin binding protein 4 (PBP4)
著者D'Andrea, E.D, Moon, T.M, Peti, W, Page, R.
登録日2018-09-25
公開日2018-10-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
6MKI
DownloadVisualize
BU of 6mki by Molmil
Crystal structure of penicillin-binding protein 4 (PBP4) from Enterococcus faecalis in the ceftaroline-bound form
分子名称: Ceftaroline, bound form, GLYCEROL, ...
著者D'Andrea, E.D, Moon, T.M, Peti, W, Page, R.
登録日2018-09-25
公開日2018-10-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.984 Å)
主引用文献The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
7MPZ
DownloadVisualize
BU of 7mpz by Molmil
HNH Nuclease Domain from G. stearothermophilus Cas9
分子名称: CRISPR-associated endonuclease Cas9
著者D'Ordine, A.M, Belato, H.B, Lisi, G.P, Jogl, G.
登録日2021-05-05
公開日2021-12-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural and dynamic insights into the HNH nuclease of divergent Cas9 species.
J.Struct.Biol., 214, 2021
1XCV
DownloadVisualize
BU of 1xcv by Molmil
Crystal Structure Of (H79AC102D)Dtxr complexed with Nickel(II)
分子名称: Diphtheria toxin repressor mutant, NICKEL (II) ION
著者D'aquino, J.A, Ringe, D.
登録日2004-09-03
公開日2005-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanism of metal ion activation of the diphtheria toxin repressor DtxR.
Proc.Natl.Acad.Sci.USA, 102, 2005
3GLX
DownloadVisualize
BU of 3glx by Molmil
Crystal Structure Analysis of the DtxR(E175K) complexed with Ni(II)
分子名称: Diphtheria toxin repressor, NICKEL (II) ION, PHOSPHATE ION
著者D'Aquino, J.A, Denninger, A, Moulin, A, D'Aquino, K.E, Ringe, D.
登録日2009-03-12
公開日2009-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Decreased sensitivity to changes in the concentration of metal ions as the basis for the hyperactivity of DtxR(E175K).
J.Mol.Biol., 390, 2009
2QO8
DownloadVisualize
BU of 2qo8 by Molmil
Crystal structure of the complex of hcaii with an indane-sulfonamide inhibitor
分子名称: Carbonic anhydrase 2, GLYCEROL, MERCURIBENZOIC ACID, ...
著者D'Ambrosio, K, De Simone, G.
登録日2007-07-20
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Carbonic Anhydrase Inhibitors: Binding of Indanesulfonamides to the Human Isoform II.
Chemmedchem, 3, 2007
2QQA
DownloadVisualize
BU of 2qqa by Molmil
Crystal Structure of DtxR(E9A C102D) Complexed with Nickel(II)
分子名称: Diphtheria toxin repressor, NICKEL (II) ION, PHOSPHATE ION
著者D'Aquino, J.A, Lattimer, J.R, Denninger, A, D'Aquino, K.E, Ringe, D.
登録日2007-07-26
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Role of the N-Terminal Helix in the Metal Ion-Induced Activation of the Diphtheria Toxin Repressor DtxR.
Biochemistry, 46, 2007
6MFQ
DownloadVisualize
BU of 6mfq by Molmil
Crystal structure of a PMS2 variant
分子名称: Mismatch repair endonuclease PMS2
著者D'Arcy, B.M, Prakash, A.
登録日2018-09-11
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Biochemical and structural characterization of two variants of uncertain significance in the PMS2 gene.
Hum. Mutat., 40, 2019
3LB9
DownloadVisualize
BU of 3lb9 by Molmil
Crystal structure of the B. circulans cpA123 circular permutant
分子名称: Endo-1,4-beta-xylanase
著者D'Angelo, I, Reitinger, S, Ludwiczek, M, Strynadka, N, Withers, S.G, Mcintosh, L.P.
登録日2010-01-08
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Circular permutation of Bacillus circulans xylanase: a kinetic and structural study.
Biochemistry, 49, 2010
2ZYQ
DownloadVisualize
BU of 2zyq by Molmil
Crystal structure of the HsaC extradiol dioxygenase from M. tuberculosis
分子名称: D(-)-TARTARIC ACID, FE (II) ION, PROBABLE BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE BPHC
著者D'Angelo, I, Yam, K.C, Eltis, L.D, Strynadka, N.
登録日2009-01-28
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Studies of a ring-cleaving dioxygenase illuminate the role of cholesterol metabolism in the pathogenesis of Mycobacterium tuberculosis.
Plos Pathog., 5, 2009
2ZI8
DownloadVisualize
BU of 2zi8 by Molmil
Crystal structure of the HsaC extradiol dioxygenase from M. tuberculosis in complex with 3,4-dihydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione (DHSA)
分子名称: 3,4-dihydroxy-9,10-secoandrosta-1(10),2,4-triene-9,17-dione, FE (II) ION, PROBABLE BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE BPHC
著者D'Angelo, I, Yam, K.C, Eltis, L.D, Strynadka, N.
登録日2008-02-13
公開日2009-02-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Studies of a ring-cleaving dioxygenase illuminate the role of cholesterol metabolism in the pathogenesis of Mycobacterium tuberculosis.
Plos Pathog., 5, 2009
3EFJ
DownloadVisualize
BU of 3efj by Molmil
Structure of c-Met with pyrimidone inhibitor 7
分子名称: 2-benzyl-5-{4-[(6,7-dimethoxyquinolin-4-yl)oxy]-3-fluorophenyl}-3-methylpyrimidin-4(3H)-one, Hepatocyte growth factor receptor
著者D'Angelo, N, Bellon, S, Whittington, D.
登録日2008-09-09
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Design, synthesis, and biological evaluation of potent c-Met inhibitors.
J.Med.Chem., 51, 2008
3KN6
DownloadVisualize
BU of 3kn6 by Molmil
Crystal structure of the C-terminal kinase domain of MSK1
分子名称: Ribosomal protein S6 kinase alpha-5
著者D'Angelo, I, Malakhova, M, Dong, Z.
登録日2009-11-12
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the active form of the C-terminal kinase domain of mitogen- and stress-activated protein kinase 1.
J.Mol.Biol., 399, 2010
3KN5
DownloadVisualize
BU of 3kn5 by Molmil
Crystal structure of the C-terminal kinase domain of msk1 in complex with AMP-PNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ribosomal protein S6 kinase alpha-5
著者D'Angelo, I, Malakhova, M, Dong, Z.
登録日2009-11-12
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the active form of the C-terminal kinase domain of mitogen- and stress-activated protein kinase 1.
J.Mol.Biol., 399, 2010
2QQ9
DownloadVisualize
BU of 2qq9 by Molmil
Crystal Structure of DtxR(D6A C102D) Complexed with Nickel(II)
分子名称: Diphtheria toxin repressor, NICKEL (II) ION, PHOSPHATE ION
著者D'Aquino, J.A, Lattimer, J.R, Denninger, A, D'Aquino, K.E, Ringe, D.
登録日2007-07-26
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Role of the N-Terminal Helix in the Metal Ion-Induced Activation of the Diphtheria Toxin Repressor DtxR.
Biochemistry, 46, 2007
2QQB
DownloadVisualize
BU of 2qqb by Molmil
Crystal Structure of DtxR(M10A C102D) Complexed with Nickel(II)
分子名称: Diphtheria toxin repressor, NICKEL (II) ION, PHOSPHATE ION
著者D'Aquino, J.A, Lattimer, J.R, Denninger, A, D'Aquino, K.E, Ringe, D.
登録日2007-07-26
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Role of the N-Terminal Helix in the Metal Ion-Induced Activation of the Diphtheria Toxin Repressor DtxR.
Biochemistry, 46, 2007
1P92
DownloadVisualize
BU of 1p92 by Molmil
Crystal Structure of (H79A)DtxR
分子名称: BETA-MERCAPTOETHANOL, Diphtheria toxin repressor
著者D'Aquino, J.A, Ringe, D.
登録日2003-05-08
公開日2004-05-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Determinants of the SRC homology domain 3-like fold.
J.Bacteriol., 185, 2003
5CLU
DownloadVisualize
BU of 5clu by Molmil
THE CRYSTAL STRUCTURE OF THE COMPLEX of HCAII WITH A SACCHARINE DERIVATIVE
分子名称: (1,1-dioxido-3-oxo-1,2-benzothiazol-2(3H)-yl)acetic acid, Carbonic anhydrase 2, GLYCEROL, ...
著者D'Ambrosio, K, De Simone, G.
登録日2015-07-16
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A Combined Crystallographic and Theoretical Study Explains the Capability of Carboxylic Acids to Adopt Multiple Binding Modes in the Active Site of Carbonic Anhydrases.
Chemistry, 22, 2016
3HJP
DownloadVisualize
BU of 3hjp by Molmil
The crystal structure of Bcp4 from Sulfolobus Solfataricus
分子名称: CHLORIDE ION, Peroxiredoxin, bacterioferritin comigratory protein homolog (Bcp-4)
著者D'Ambrosio, K, De Simone, G.
登録日2009-05-22
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Exploring the catalytic mechanism of the first dimeric Bcp: functional, structural and docking analysis
To be Published
3AFE
DownloadVisualize
BU of 3afe by Molmil
Crystal structure of the HsaA monooxygenase from M.tuberculosis
分子名称: Hydroxylase, putative
著者D'Angelo, I, Lin, L.Y, Dresen, C, Tocheva, E.I, Eltis, L.D, Strynadka, N.
登録日2010-02-28
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A flavin-dependent monooxygenase from Mycobacterium tuberculosis involved in cholesterol catabolism
J.Biol.Chem., 285, 2010
3AFF
DownloadVisualize
BU of 3aff by Molmil
Crystal structure of the HsaA monooxygenase from M. tuberculosis
分子名称: Hydroxylase, putative
著者D'Angelo, I, Lin, L.Y, Dresen, C, Tocheva, E.I, Strynadka, N, Eltis, L.D.
登録日2010-02-28
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A flavin-dependent monooxygenase from Mycobacterium tuberculosis involved in cholesterol catabolism
J.Biol.Chem., 285, 2010
4G07
DownloadVisualize
BU of 4g07 by Molmil
The crystal structure of the C366S mutant of HDH from Brucella suis
分子名称: GLYCEROL, Histidinol dehydrogenase, ZINC ION
著者D'Ambrosio, K, De Simone, G.
登録日2012-07-09
公開日2013-09-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for the rational design of new anti-Brucella agents: The crystal structure of the C366S mutant of l-histidinol dehydrogenase from Brucella suis.
Biochimie, 97, 2014
4G09
DownloadVisualize
BU of 4g09 by Molmil
The crystal structure of the C366S mutant of HDH from Brucella suis in complex with a substituted benzyl ketone
分子名称: (3S)-3-amino-1-[4-(benzyloxy)phenyl]-4-(1H-imidazol-4-yl)butan-2-one, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者D'Ambrosio, K, De Simone, G.
登録日2012-07-09
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the rational design of new anti-Brucella agents: The crystal structure of the C366S mutant of l-histidinol dehydrogenase from Brucella suis.
Biochimie, 97, 2014
2ZYL
DownloadVisualize
BU of 2zyl by Molmil
Crystal structure of 3-ketosteroid-9-alpha-hydroxylase (KshA) from M. tuberculosis
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, POSSIBLE OXIDOREDUCTASE, ...
著者D'Angelo, I, Capyk, J, Strynadka, N, Eltis, L.
登録日2009-01-27
公開日2009-03-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization of 3-ketosteroid 9{alpha}-hydroxylase, a Rieske oxygenase in the cholesterol degradation pathway of Mycobacterium tuberculosis
J.Biol.Chem., 284, 2009
3THE
DownloadVisualize
BU of 3the by Molmil
Crystal structure of Co2+2-HAI (pH 8.5)
分子名称: Arginase-1, BICINE, COBALT (II) ION
著者D'Antonio, E.L, Christianson, D.W.
登録日2011-08-18
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structures of complexes with cobalt-reconstituted human arginase I.
Biochemistry, 50, 2011

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon