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PDB: 53526 results

6WZO
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BU of 6wzo by Molmil
Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P1 form
Descriptor: Nucleoprotein
Authors:Ye, Q, Corbett, K.D.
Deposit date:2020-05-14
Release date:2020-05-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein.
Protein Sci., 29, 2020
6NTN
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BU of 6ntn by Molmil
Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by A-230 in Complex with the Reactivator, HI-6
Descriptor: (S)-N-[(1E)-1-(diethylamino)ethylidene]-P-methylphosphonamidic fluoride, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bester, S.M, Guelta, M.A, Height, J.J, Pegan, S.D.
Deposit date:2019-01-29
Release date:2020-07-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Insights into inhibition of human acetylcholinesterase by Novichok, A-series Nerve Agents
To Be Published
8CMF
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BU of 8cmf by Molmil
Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 nsp3 epitope (orf1ab)1350-1364
Descriptor: 1,2-ETHANEDIOL, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:MacLachlan, B.J, Mason, G.H, Sourfield, D.O, Godkin, A.J, Rizkallah, P.J.
Deposit date:2023-02-19
Release date:2023-07-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural definition of HLA class II-presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4 + T cell immunity.
Cell Rep, 42, 2023
6YU3
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BU of 6yu3 by Molmil
Crystal structure of MhsT in complex with L-phenylalanine
Descriptor: DODECYL-BETA-D-MALTOSIDE, GLYCEROL, PHENYLALANINE, ...
Authors:Focht, D, Neumann, C, Lyons, J, Eguskiza Bilbao, A, Blunck, R, Malinauskaite, L, Schwarz, I.O, Javitch, J.A, Quick, M, Nissen, P.
Deposit date:2020-04-25
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A non-helical region in transmembrane helix 6 of hydrophobic amino acid transporter MhsT mediates substrate recognition.
Embo J., 40, 2021
8CMI
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BU of 8cmi by Molmil
Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 Omicron (BA.1) Spike peptide S761-775
Descriptor: 1,2-ETHANEDIOL, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:MacLachlan, B.J, Mason, G.H, Sourfield, D.O, Godkin, A.J, Rizkallah, P.J.
Deposit date:2023-02-19
Release date:2023-07-26
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural definition of HLA class II-presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4 + T cell immunity.
Cell Rep, 42, 2023
6YWO
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BU of 6ywo by Molmil
CutA in complex with A3 RNA
Descriptor: CHLORIDE ION, CutA, MAGNESIUM ION, ...
Authors:Malik, D, Kobylecki, K, Krawczyk, P, Poznanski, J, Jakielaszek, A, Napiorkowska, A, Dziembowski, A, Tomecki, R, Nowotny, M.
Deposit date:2020-04-29
Release date:2020-08-05
Last modified:2020-09-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of CutA, RNA nucleotidyl transferase with an unusual preference for cytosine.
Nucleic Acids Res., 48, 2020
8CME
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BU of 8cme by Molmil
Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 Membrane peptide M176-190
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HLA class II histocompatibility antigen, ...
Authors:MacLachlan, B.J, Mason, G.H, Sourfield, D.O, Godkin, A.J, Rizkallah, P.J.
Deposit date:2023-02-19
Release date:2023-07-26
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural definition of HLA class II-presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4 + T cell immunity.
Cell Rep, 42, 2023
8SKB
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BU of 8skb by Molmil
Crystal Structure of GDP-mannose 3,5 epimerase de Myrciaria dubia in complex with NAD
Descriptor: GDP-mannose 3,5 epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C.
Deposit date:2023-04-19
Release date:2024-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural insights into the Smirnoff-Wheeler pathway for vitamin C production in the Amazon fruit camu-camu.
J.Exp.Bot., 75, 2024
8CMD
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BU of 8cmd by Molmil
Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 Spike peptide S761-775
Descriptor: 1,2-ETHANEDIOL, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:MacLachlan, B.J, Mason, G.H, Sourfield, D.O, Godkin, A.J, Rizkallah, P.J.
Deposit date:2023-02-19
Release date:2023-07-26
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural definition of HLA class II-presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4 + T cell immunity.
Cell Rep, 42, 2023
6GTS
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BU of 6gts by Molmil
Structure of the AtaT-AtaR complex bound DNA
Descriptor: Acetyltransferase, DNA, DUF1778 domain-containing protein
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2018-06-19
Release date:2019-03-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.357 Å)
Cite:Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
4U2Y
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BU of 4u2y by Molmil
Sco GlgEI-V279S in Complex with Reaction Intermediate Azasugar
Descriptor: (2R,3R,4R,5R)-4-hydroxy-2,5-bis(hydroxymethyl)pyrrolidin-3-yl alpha-D-glucopyranoside, Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1
Authors:Ronning, D.R, Lindenberger, J.J.
Deposit date:2014-07-18
Release date:2015-08-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.483 Å)
Cite:Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors.
Sci Rep, 5, 2015
8USU
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BU of 8usu by Molmil
Crystal Structure of L-galactose 1-dehydrogenase of Myrciaria dubia in complex with NAD
Descriptor: L-galactose dehydrogenase isoform X1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C.
Deposit date:2023-10-30
Release date:2024-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structural insights into the Smirnoff-Wheeler pathway for vitamin C production in the Amazon fruit camu-camu.
J.Exp.Bot., 75, 2024
7MPS
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BU of 7mps by Molmil
Brucella melitensis NrnC with engaged loop
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NanoRNase C, SULFATE ION
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2021-05-04
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural characterization of NrnC identifies unifying features of dinucleotidases.
Elife, 10, 2021
8CNK
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BU of 8cnk by Molmil
Cryo-EM structure of retinal-free proteoopsin bound to decanoate
Descriptor: DECANOIC ACID, Green-light absorbing proteorhodopsin
Authors:Hirschi, S, Lemmin, T, Fotiadis, D.
Deposit date:2023-02-23
Release date:2024-07-03
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structural insights into the mechanism and dynamics of proteorhodopsin biogenesis and retinal scavenging.
Nat Commun, 15, 2024
7BCQ
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BU of 7bcq by Molmil
ASCT2 in the presence of the inhibitor Lc-BPE (position "up") in the outward-open conformation.
Descriptor: 4-(4-phenylphenyl)carbonyloxypyrrolidine-2-carboxylic acid, Neutral amino acid transporter B(0)
Authors:Garibsingh, R.A, Ndaru, E, Garaeva, A.A, Shi, Y, Zielewicz, L, Bonomi, M, Slotboom, D.J, Paulino, C, Grewer, C, Schlessinger, A.
Deposit date:2020-12-21
Release date:2021-09-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Rational design of ASCT2 inhibitors using an integrated experimental-computational approach.
Proc.Natl.Acad.Sci.USA, 118, 2021
8CQC
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BU of 8cqc by Molmil
Cryo-EM structure of pentameric proteorhodopsin A18L mutant
Descriptor: Green-light absorbing proteorhodopsin, RETINAL
Authors:Hirschi, S, Lemmin, T, Fotiadis, D.
Deposit date:2023-03-05
Release date:2024-07-03
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural insights into the mechanism and dynamics of proteorhodopsin biogenesis and retinal scavenging.
Nat Commun, 15, 2024
5M7S
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BU of 5m7s by Molmil
Structure of human O-GlcNAc hydrolase with bound transition state analog ThiametG
Descriptor: (3AR,5R,6S,7R,7AR)-2-(ETHYLAMINO)-5-(HYDROXYMETHYL)-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D][1,3]THIAZOLE-6,7-DIOL, Protein O-GlcNAcase
Authors:Roth, C, Chan, S, Offen, W.A, Hemsworth, G.R, Willems, L.I, King, D, Varghese, V, Britton, R, Vocadlo, D.J, Davies, G.J.
Deposit date:2016-10-28
Release date:2017-03-29
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional insight into human O-GlcNAcase.
Nat. Chem. Biol., 13, 2017
8CQD
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BU of 8cqd by Molmil
Cryo-EM structure of hexameric proteorhodopsin A18L mutant
Descriptor: Green-light absorbing proteorhodopsin, RETINAL
Authors:Hirschi, S, Lemmin, T, Fotiadis, D.
Deposit date:2023-03-05
Release date:2024-07-03
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Structural insights into the mechanism and dynamics of proteorhodopsin biogenesis and retinal scavenging.
Nat Commun, 15, 2024
7BIF
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BU of 7bif by Molmil
Crystal structure of v22WRAP-T, a 7-bladed designer protein
Descriptor: v22WRAP-T
Authors:Lee, X.Y, Mylemans, B, Laier, I, Voet, A.R.D.
Deposit date:2021-01-12
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure and stability of the designer protein WRAP-T and its permutants.
Sci Rep, 11, 2021
8FIQ
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BU of 8fiq by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: cs207AB
Authors:Bera, A.K, Leung, P.J.Y, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FVT
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BU of 8fvt by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: 3hb12
Authors:Bera, A.K, Broerman, A, Baker, D.
Deposit date:2023-01-19
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
5MQW
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BU of 5mqw by Molmil
High-speed fixed-target serial virus crystallography
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Roedig, P, Ginn, H.M, Pakendorf, T, Sutton, G, Harlos, K, Walter, T.S, Meyer, J, Fischer, P, Duman, R, Vartiainen, I, Reime, B, Warmer, M, Brewster, A.S, Young, I.D, Michels-Clark, T, Sauter, N.K, Sikorsky, M, Nelson, S, Damiani, D.S, Alonso-Mori, R, Ren, J, Fry, E.E, David, C, Stuart, D.I, Wagner, A, Meents, A.
Deposit date:2016-12-21
Release date:2017-06-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-speed fixed-target serial virus crystallography.
Nat. Methods, 14, 2017
4ZTJ
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BU of 4ztj by Molmil
Crystal Structure of the Prototype Foamy Virus Intasome with a 2-Pyridinone Aminal Inhibitor
Descriptor: (1R,2S,5R)-8'-(3-chloro-4-fluorobenzyl)-6'-hydroxy-1-(hydroxymethyl)-2'-methyl-9',10'-dihydro-2'H-spiro[bicyclo[3.1.0]hexane-2,3'-imidazo[5,1-a][2,6]naphthyridine]-1',5',7'(8'H)-trione, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ...
Authors:Klein, D.J, Patel, S.
Deposit date:2015-05-14
Release date:2015-10-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Discovery of 2-Pyridinone Aminals: A Prodrug Strategy to Advance a Second Generation of HIV-1 Integrase Strand Transfer Inhibitors.
J.Med.Chem., 58, 2015
5KZX
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BU of 5kzx by Molmil
Crystal structure of human GAA
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Deming, D.T, Garman, S.C.
Deposit date:2016-07-25
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of human GAA: structural basis of Pompe disease
To be published
5KOR
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BU of 5kor by Molmil
Arabidopsis thaliana fucosyltransferase 1 (FUT1) in complex with GDP and a xylo-oligossacharide
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Rocha, J, de Sanctis, D, Breton, C.
Deposit date:2016-07-01
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Arabidopsis thaliana FUT1 Reveals a Variant of the GT-B Class Fold and Provides Insight into Xyloglucan Fucosylation.
Plant Cell, 28, 2016

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PDB entries from 2024-10-09

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