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PDB: 53526 results

4WEK
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Crystal structure of Pseudomonas aeruginosa PBP3 with a R4 substituted vinyl monocarbam
Descriptor: (3S,4S,7Z)-7-(2-amino-1,3-thiazol-4-yl)-3-ethenyl-4-formyl-1-[({3-(5-hydroxy-4-oxo-3,4-dihydropyridin-2-yl)-4-[3-(methylsulfonyl)propyl]-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl}sulfonyl)amino]-10,10-dimethyl-1,6-dioxo-9-oxa-2,5,8-triazaundec-7-en-11-oic acid, Penicillin-binding protein 3
Authors:Ferguson, A.D.
Deposit date:2014-09-10
Release date:2015-04-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:SAR and Structural Analysis of Siderophore-Conjugated Monocarbam Inhibitors of Pseudomonas aeruginosa PBP3.
Acs Med.Chem.Lett., 6, 2015
4WX0
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UndA complexed with beta-hydroxydodecanoic acid
Descriptor: (3R)-3-HYDROXYDODECANOIC ACID, FE (III) ION, PEROXIDE ION, ...
Authors:Li, X, Cate, J.D.H.
Deposit date:2014-11-13
Release date:2014-12-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Microbial biosynthesis of medium-chain 1-alkenes by a nonheme iron oxidase.
Proc.Natl.Acad.Sci.USA, 111, 2014
7Q9J
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BU of 7q9j by Molmil
Beta-26 fab in complex with SARS-CoV-2 beta-Spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-26 heavy chain, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
Deposit date:2021-11-12
Release date:2021-12-15
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7Q9G
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BU of 7q9g by Molmil
COVOX-222 fab in complex with SARS-CoV-2 beta-Spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COVOX-222 heavy chain, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
Deposit date:2021-11-12
Release date:2021-12-15
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7Q9K
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BU of 7q9k by Molmil
Beta-32 fab in complex with SARS-CoV-2 beta-Spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-32 heavy chain, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
Deposit date:2021-11-12
Release date:2021-12-15
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7Q9I
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Beta-43 fab in complex with SARS-CoV-2 beta-Spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-43 heavy chain, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
Deposit date:2021-11-12
Release date:2021-12-15
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7Q9M
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BU of 7q9m by Molmil
Beta-53 fab in complex with SARS-CoV-2 beta-Spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-53 fab heavy chain, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
Deposit date:2021-11-12
Release date:2021-12-15
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7Q9P
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BU of 7q9p by Molmil
Beta-06 fab in complex with SARS-CoV-2 beta-Spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-06 heavy chain, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
Deposit date:2021-11-12
Release date:2021-12-15
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
7QO9
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BU of 7qo9 by Molmil
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD and NTD (Local)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,SARS-CoV-2 S Omicron Spike B.1.1.529, ...
Authors:Ni, D, Lau, K, Turelli, P, Beckert, B, Nazarov, S, Pojer, F, Myasnikov, A, Stahlberg, H, Trono, D.
Deposit date:2021-12-23
Release date:2022-01-26
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Structural analysis of the Spike of the Omicron SARS-COV-2 variant by cryo-EM and implications for immune evasion
Biorxiv, 2021
7QTJ
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BU of 7qtj by Molmil
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD up - 1-P2G3 and 1-P5C3 Fabs (Local)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, P2G3 Heavy Chain, P2G3 Light Chain, ...
Authors:Ni, D, Lau, K, Turelli, P, Fenwick, C, Perez, L, Pojer, F, Stahlberg, H, Pantaleo, G, Trono, D.
Deposit date:2022-01-14
Release date:2022-08-03
Last modified:2022-09-07
Method:ELECTRON MICROSCOPY (4.01 Å)
Cite:Patient-derived monoclonal antibody neutralizes SARS-CoV-2 Omicron variants and confers full protection in monkeys.
Nat Microbiol, 7, 2022
9FQ2
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BU of 9fq2 by Molmil
Poliovirus 3C protease in H32 spacegroup
Descriptor: Protease 3C
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Poliovirus 3C protease in H32 spacegroup
To Be Published
9BGM
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BU of 9bgm by Molmil
Pseudomonas phage DEV neck and tail (portal, head-to-tail and tail tube proteins)
Descriptor: gp75 tail tube, gp80 portal protein, gp83 head-to-tail
Authors:Iglesias, S.M, Hou, C.-F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor
To Be Published
9GBV
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BU of 9gbv by Molmil
E.coli gyrase holocomplex with chirally wrapped 217 bp DNA fragment
Descriptor: DNA gyrase subunit A, DNA gyrase subunit B, MAGNESIUM ION, ...
Authors:Michalczyk, E, Ghilarov, D.
Deposit date:2024-07-31
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:Structure of Escherichia coli DNA gyrase with chirally wrapped DNA supports ratchet-and-pawl mechanism for an ATP-powered supercoiling motor
Proceedings of the National Academy of Sciences USA, 2024
9CRW
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BU of 9crw by Molmil
Crystal structure of the Candida albicans kinesin-8 proximal tail domain
Descriptor: Kinesin-like protein
Authors:Trofimova, D, Doubleday, C, Hunter, B, Serrano Arevalo, J, Davison, E, Wen, E, Munro, K, Allingham, J.S.
Deposit date:2024-07-22
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of the Candida albicans kinesin-8 proximal tail domain
To Be Published
8ZWH
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BU of 8zwh by Molmil
Heparin bound E46K alpha-synuclein fibril
Descriptor: Alpha-synuclein
Authors:Tao, Y.Q, Liu, C, Li, D.
Deposit date:2024-06-13
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Heparin bound E46K alpha-synuclein fibril
To Be Published
9DJ9
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BU of 9dj9 by Molmil
HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE (VHR) in distinct apo form
Descriptor: Dual specificity protein phosphatase 3
Authors:Keedy, D.A, Lemberikman, A.M, Isiorho, E.A, Aleshin, A.E, Wu, J, Lambert, L.J, Cosford, N.D.P, Tautz, L.
Deposit date:2024-09-06
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.924 Å)
Cite:Fragment Screening Platform and Discovery of Novel Fragment Binders of the VHR Phosphatase, a Drug Target for Sepsis and Septic Shock
To Be Published
9CUZ
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BU of 9cuz by Molmil
Bufavirus 1 complexed with 6SLN
Descriptor: N-acetyl-alpha-neuraminic acid, VP1
Authors:Gulkis, M.C, McKenna, R, Bennett, A.D.
Deposit date:2024-07-27
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (2.16 Å)
Cite:Structural Characterization of Human Bufavirus 1: Receptor Binding and Endosomal pH-Induced Changes.
Viruses, 16, 2024
9GDU
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BU of 9gdu by Molmil
Trp-cage fortified Tc5b-Exenatide chimera with disulfide bond cyclization (Ex-4-Tc5bCC) at 310K
Descriptor: Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bCC)
Authors:Horvath, D.
Deposit date:2024-08-06
Release date:2024-09-25
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Influence of Trp-Cage on the Function and Stability of GLP-1R Agonist Exenatide Derivatives.
J.Med.Chem., 67, 2024
8TLM
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BU of 8tlm by Molmil
Structure of a class A GPCR/Fab complex
Descriptor: C-C chemokine receptor type 8, Green fluorescent protein fusion, Fab heavy chain, ...
Authors:Sun, D, Johnson, M, Masureel, M.
Deposit date:2023-07-27
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of antibody inhibition and chemokine activation of the human CC chemokine receptor 8.
Nat Commun, 14, 2023
8ZMV
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BU of 8zmv by Molmil
Structure of a triple-helix region of human Collagen type XVII from Trautec
Descriptor: collagen type XVII
Authors:Chu, Y, Zhai, Y, Fan, X, Fu, S, Li, J, Wu, X, Cai, H, Wang, X, Li, D, Feng, P, Cao, K, Qian, S.
Deposit date:2024-05-24
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a triple-helix region of human Collagen type XVII from Trautec
To Be Published
9G0N
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BU of 9g0n by Molmil
Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 299K
Descriptor: Exendin-4
Authors:Horvath, D.
Deposit date:2024-07-08
Release date:2024-09-25
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Influence of Trp-Cage on the Function and Stability of GLP-1R Agonist Exenatide Derivatives.
J.Med.Chem., 67, 2024
9G31
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BU of 9g31 by Molmil
Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bDR) at 310K
Descriptor: Exendin-4
Authors:Horvath, D.
Deposit date:2024-07-11
Release date:2024-09-25
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Influence of Trp-Cage on the Function and Stability of GLP-1R Agonist Exenatide Derivatives.
J.Med.Chem., 67, 2024
9G5P
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BU of 9g5p by Molmil
Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 277K
Descriptor: Exendin-4
Authors:Horvath, D.
Deposit date:2024-07-17
Release date:2024-09-25
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Influence of Trp-Cage on the Function and Stability of GLP-1R Agonist Exenatide Derivatives.
J.Med.Chem., 67, 2024
9J23
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BU of 9j23 by Molmil
Structure of a triple-helix region of human Collagen type II from Trautec
Descriptor: Triple-helix region of human collagen type II
Authors:Fan, X, Zhai, Y, Chu, Y, Fu, S, Li, D, Feng, P, Cao, K, Li, J, Si, Y, Ma, L, Qian, S.
Deposit date:2024-08-06
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of a triple-helix region of human Collagen type II from Trautec
To Be Published
9G21
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BU of 9g21 by Molmil
Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 321K
Descriptor: Exendin-4
Authors:Horvath, D.
Deposit date:2024-07-10
Release date:2024-09-25
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Influence of Trp-Cage on the Function and Stability of GLP-1R Agonist Exenatide Derivatives.
J.Med.Chem., 67, 2024

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PDB entries from 2024-10-09

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