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PDB: 52974 results

2W61
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Saccharomyces cerevisiae Gas2p apostructure (E176Q mutant)
Descriptor: GLYCOLIPID-ANCHORED SURFACE PROTEIN 2
Authors:Schuettelkopf, A.W, Hurtado-Guerrero, R, van Aalten, D.M.F.
Deposit date:2008-12-16
Release date:2009-02-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Molecular Mechanisms of Yeast Cell Wall Glucan Remodeling.
J.Biol.Chem., 284, 2009
4V9C
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BU of 4v9c by Molmil
Allosteric control of the ribosome by small-molecule antibiotics
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Cate, J.H.D, Pulk, A, Blanchard, S.C, Wang, L, Feldman, M.B, Wasserman, M.R, Altman, R.
Deposit date:2012-07-25
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Allosteric control of the ribosome by small-molecule antibiotics.
Nat.Struct.Mol.Biol., 19, 2012
2J80
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BU of 2j80 by Molmil
Structure of Citrate-bound Periplasmic Domain of Sensor Histidine Kinase CitA
Descriptor: CITRATE ANION, GLYCEROL, SENSOR KINASE CITA, ...
Authors:Sevvana, M, Vijayan, V, Zweckstetter, M, Reinelt, S, Madden, D.R, Sheldrick, G.M, Bott, M, Griesinger, C, Becker, S.
Deposit date:2006-10-18
Release date:2007-10-23
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Ligand-Induced Switch in the Periplasmic Domain of Sensor Histidine Kinase Cita.
J.Mol.Biol., 377, 2008
7SXK
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BU of 7sxk by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - Full Length
Descriptor: Portal protein
Authors:Hou, C.F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-23
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
7T5A
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BU of 7t5a by Molmil
Crystal structure of the molybdate-binding periplasmic protein ModA from the bacteria Pseudomonsa aeruginosa in tungstate-bound form
Descriptor: AMMONIUM ION, Molybdate-binding periplasmic protein ModA, TUNGSTATE(VI)ION
Authors:Ngu, D.H.Y, Luo, Z, Lim, B.Y.J, Kobe, B.
Deposit date:2021-12-11
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:The Impact of Chromate on Pseudomonas aeruginosa Molybdenum Homeostasis.
Front Microbiol, 13, 2022
1JTP
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BU of 1jtp by Molmil
Degenerate interfaces in antigen-antibody complexes
Descriptor: FORMIC ACID, LYSOZYME C, SODIUM ION, ...
Authors:Decanniere, K, Transue, T.R, Desmyter, A, Maes, D, Muyldermans, S, Wyns, L.
Deposit date:2001-08-21
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Degenerate interfaces in antigen-antibody complexes.
J.Mol.Biol., 313, 2001
6J23
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BU of 6j23 by Molmil
Crystal structure of arabidopsis ADAL complexed with GMP
Descriptor: Adenosine/AMP deaminase family protein, GUANOSINE-5'-MONOPHOSPHATE, ZINC ION
Authors:Wu, B.X, Zhang, D, Nie, H.B, Shen, S.L, Li, S.S, Patel, D.J.
Deposit date:2018-12-30
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure ofArabidopsis thaliana N6-methyl-AMP deaminase ADAL with bound GMP and IMP and implications forN6-methyl-AMP recognition and processing.
Rna Biol., 16, 2019
7T4Z
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BU of 7t4z by Molmil
Crystal structure of the molybdate-binding periplasmic protein ModA from the bacteria Pseudomonsa aeruginosa in ligand-free form
Descriptor: AMMONIUM ION, GLYCEROL, Molybdate-binding periplasmic protein, ...
Authors:Ngu, D.H.Y, Luo, Z, Lim, B.Y.J, Kobe, B.
Deposit date:2021-12-10
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The Impact of Chromate on Pseudomonas aeruginosa Molybdenum Homeostasis.
Front Microbiol, 13, 2022
2IIR
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BU of 2iir by Molmil
Acetate kinase from a hypothermophile Thermotoga maritima
Descriptor: Acetate kinase
Authors:Mukhopadhyay, S, Hasson, M.S, Sanders, D.A.
Deposit date:2006-09-28
Release date:2007-09-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Acetate kinase from a hypothermophile Thermotoga maritima
To be Published
2IKD
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BU of 2ikd by Molmil
Solution Structure of the first Clip domain in PAP2
Descriptor: Prophenoloxidase activating proteinase-2
Authors:Huang, R.D, Lv, Z.Q, Dai, H.E, Velde, D.V, Prakash, O, Jiang, H.B.
Deposit date:2006-10-02
Release date:2007-10-16
Last modified:2020-09-09
Method:SOLUTION NMR
Cite:Solution Structure of Clip domain in PAP2
To be Published
7T50
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BU of 7t50 by Molmil
Crystal structure of the molybdate-binding periplasmic protein ModA from the bacteria Pseudomonsa aeruginosa in chromate-bound form
Descriptor: AMMONIUM ION, Chromate, GLYCEROL, ...
Authors:Ngu, D.H.Y, Luo, Z, Lim, B.Y.J, Kobe, B.
Deposit date:2021-12-11
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Impact of Chromate on Pseudomonas aeruginosa Molybdenum Homeostasis.
Front Microbiol, 13, 2022
7BUJ
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BU of 7buj by Molmil
mcGAS bound with pppGpG
Descriptor: Cyclic GMP-AMP synthase, GUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Wang, B, Su, X.D.
Deposit date:2020-04-07
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Mn2+Directly Activates cGAS and Structural Analysis Suggests Mn2+Induces a Noncanonical Catalytic Synthesis of 2'3'-cGAMP.
Cell Rep, 32, 2020
2W8U
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SPT with PLP, N100Y
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SERINE PALMITOYLTRANSFERASE
Authors:Raman, M.C.C, Johnson, K.A, Campopiano, D.J, Naismith, J.H.
Deposit date:2009-01-19
Release date:2009-01-27
Last modified:2015-11-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The External-Aldimine Form of Serine Palmitoyltranserase; Structural, Kinetic and Spectroscopic Analysis of the Wild-Type Enzyme and Hsan1 Mutant Mimics.
J.Biol.Chem., 284, 2009
7T51
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BU of 7t51 by Molmil
Crystal structure of the molybdate-binding periplasmic protein ModA from the bacteria Pseudomonsa aeruginosa in molybdate-bound form
Descriptor: AMMONIUM ION, GLYCEROL, MOLYBDATE ION, ...
Authors:Ngu, D.H.Y, Luo, Z, Lim, B.Y.J, Kobe, B.
Deposit date:2021-12-11
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Impact of Chromate on Pseudomonas aeruginosa Molybdenum Homeostasis.
Front Microbiol, 13, 2022
5KV7
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BU of 5kv7 by Molmil
Human cyclophilin A at 278K, Data set 9
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H.
Deposit date:2016-07-13
Release date:2016-08-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conformational variation of proteins at room temperature is not dominated by radiation damage.
J Synchrotron Radiat, 24, 2017
2IYF
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BU of 2iyf by Molmil
The crystal structure of macrolide glycosyltransferases: A blueprint for antibiotic engineering
Descriptor: ERYTHROMYCIN A, MAGNESIUM ION, OLEANDOMYCIN GLYCOSYLTRANSFERASE, ...
Authors:Bolam, D.N, Roberts, S.M, Proctor, M.R, Turkenburg, J.P, Dodson, E.J, Martinez-Fleites, C, Yang, M, Davis, B.G, Davies, G.J, Gilbert, H.J.
Deposit date:2006-07-17
Release date:2007-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Two Macrolide Glycosyltransferases Provides a Blueprint for Host Cell Antibiotic Immunity.
Proc.Natl.Acad.Sci.USA, 104, 2007
7BX7
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BU of 7bx7 by Molmil
Cryo-EM structure of amyloid fibril formed by hnRNPA1 low complexity domain
Descriptor: Heterogeneous nuclear ribonucleoprotein A1
Authors:Sun, Y.P, Zhao, K, Liu, C, Li, D.
Deposit date:2020-04-17
Release date:2020-11-18
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:The nuclear localization sequence mediates hnRNPA1 amyloid fibril formation revealed by cryoEM structure.
Nat Commun, 11, 2020
2IC5
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BU of 2ic5 by Molmil
Crystal structure of human RAC3 grown in the presence of Gpp(NH)p.
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ugochukwu, E, Yang, X, Zao, Y, Elkins, J, Gileadi, C, Burgess, N, Colebrook, S, Gileadi, O, Fedorov, O, Bunkoczi, G, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, von Delft, F, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2006-09-12
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human RAC3 grown in the presence of Gpp(NH)p.
To be Published
7ZY3
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BU of 7zy3 by Molmil
Room temperature structure of Archaerhodopsin-3 obtained 110 ns after photoexcitation
Descriptor: Archaerhodopsin-3, CALCIUM ION, CHLORIDE ION, ...
Authors:Kwan, T.O.C, Judge, P.J, Moraes, I, Watts, A, Axford, D, Bada Juarez, J.F.
Deposit date:2022-05-23
Release date:2023-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A versatile approach to high-density microcrystals in lipidic cubic phase for room-temperature serial crystallography.
J.Appl.Crystallogr., 56, 2023
2IC2
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BU of 2ic2 by Molmil
Crystal Structure of the First FNIII Domain of Ihog
Descriptor: CG9211-PA, SULFATE ION
Authors:McLellan, J.S, Leahy, D.J.
Deposit date:2006-09-12
Release date:2006-10-24
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of a heparin-dependent complex of Hedgehog and Ihog.
Proc.Natl.Acad.Sci.Usa, 103, 2006
1SXX
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BU of 1sxx by Molmil
1.0 A Crystal Structure of D129A/L130A Mutant of Nitrophorin 4 Complexed with Nitric Oxide
Descriptor: NITRIC OXIDE, Nitrophorin 4, PHOSPHATE ION, ...
Authors:Maes, E.M, Weichsel, A, Andersen, J.F, Shepley, D, Montfort, W.R.
Deposit date:2004-03-31
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Role of binding site loops in controlling nitric oxide release: structure and kinetics of mutant forms of nitrophorin 4
Biochemistry, 43, 2004
7C1L
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BU of 7c1l by Molmil
Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant R148A in complex with C8-CoA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Non-ribosomal peptide synthetase modules, OCTANOYL-COENZYME A
Authors:Zhong, L, Diao, X, Zhang, N, Li, F.W, Zhou, H.B, Chen, H.N, Ren, X, Zhang, Y, Wu, D, Bian, X.
Deposit date:2020-05-05
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Engineering and elucidation of the lipoinitiation process in nonribosomal peptide biosynthesis.
Nat Commun, 12, 2021
1SZM
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DUAL BINDING MODE OF BISINDOLYLMALEIMIDE 2 TO PROTEIN KINASE A (PKA)
Descriptor: 3-(1H-INDOL-3-YL)-4-{1-[2-(1-METHYLPYRROLIDIN-2-YL)ETHYL]-1H-INDOL-3-YL}-1H-PYRROLE-2,5-DIONE, cAMP-dependent protein kinase, alpha-catalytic subunit
Authors:Gassel, M, Breitenlechner, C.B, Koenig, N, Huber, R, Engh, R.A, Bossemeyer, D.
Deposit date:2004-04-06
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The protein kinase C inhibitor bisindolyl maleimide 2 binds with reversed orientations to different conformations of protein kinase a.
J.Biol.Chem., 279, 2004
7SU9
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BU of 7su9 by Molmil
KRAS-G12D specific TCR9a in complex with C*05-GADGVGKSL
Descriptor: Beta-2-microglobulin, GLYCEROL, KRAS-G12D-9mer with A18L substitution, ...
Authors:Sim, M.J.W, Sun, P.D.
Deposit date:2021-11-16
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:T cells discriminate between groups C1 and C2 HLA-C.
Elife, 11, 2022
7T7H
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Crystal structure of Vaccinia Virus decapping enzyme D9 in complex with inhibitor CP100356
Descriptor: 4-(6,7-dimethoxy-3,4-dihydroisoquinolin-2(1H)-yl)-N-[2-(3,4-dimethoxyphenyl)ethyl]-6,7-dimethoxyquinazolin-2-amine, DNA repair NTP-phosphohydrolase, SODIUM ION
Authors:Peters, J.K, Gross, J.D.
Deposit date:2021-12-15
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.78000259 Å)
Cite:Fluorescence-Based Activity Screening Assay Reveals Small Molecule Inhibitors of Vaccinia Virus mRNA Decapping Enzyme D9.
Acs Chem.Biol., 17, 2022

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