Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45 results

5N4B
DownloadVisualize
BU of 5n4b by Molmil
Prolyl oligopeptidase B from Galerina marginata bound to 25mer macrocyclization substrate - S577A mutant
Descriptor: Alpha-amanitin proprotein, Prolyl oligopeptidase
Authors:Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H.
Deposit date:2017-02-10
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates.
Nat Commun, 8, 2017
5N4E
DownloadVisualize
BU of 5n4e by Molmil
Prolyl oligopeptidase B from Galerina marginata bound to 35mer hydrolysis and macrocyclization substrate - H698A mutant
Descriptor: Alpha-amanitin proprotein, GLYCEROL, Prolyl oligopeptidase
Authors:Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H.
Deposit date:2017-02-10
Release date:2017-11-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates.
Nat Commun, 8, 2017
5N4C
DownloadVisualize
BU of 5n4c by Molmil
Prolyl oligopeptidase B from Galerina marginata bound to 35mer hydrolysis and macrocyclization substrate - S577A mutant
Descriptor: Alpha-amanitin proprotein, GLYCEROL, Prolyl oligopeptidase
Authors:Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H.
Deposit date:2017-02-10
Release date:2017-11-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates.
Nat Commun, 8, 2017
5N4D
DownloadVisualize
BU of 5n4d by Molmil
Prolyl oligopeptidase B from Galerina marginata bound to 25mer macrocyclization substrate - D661A mutant
Descriptor: Alpha-amanitin proprotein, GLYCEROL, Prolyl oligopeptidase
Authors:Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H.
Deposit date:2017-02-10
Release date:2017-11-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates.
Nat Commun, 8, 2017
5N4F
DownloadVisualize
BU of 5n4f by Molmil
Prolyl oligopeptidase B from Galerina marginata - apo protein
Descriptor: GLYCEROL, Prolyl oligopeptidase
Authors:Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H.
Deposit date:2017-02-10
Release date:2017-11-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates.
Nat Commun, 8, 2017
8RH3
DownloadVisualize
BU of 8rh3 by Molmil
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 WT bound to Gemcitabine
Descriptor: (2~{R},3~{R})-4,4-bis(fluoranyl)-2-(hydroxymethyl)oxolan-3-ol, Nucleoside 2-deoxyribosyltransferase
Authors:Tang, P, Harding, C.J, Czekster, C.M.
Deposit date:2023-12-14
Release date:2024-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
7AZU
DownloadVisualize
BU of 7azu by Molmil
Crystal structure of a cyclodipeptide synthase from Bacillus thermoamylovorans
Descriptor: (2S)-hexane-1,2-diol, Cyclodipeptide synthase, BtCDPS
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2020-11-17
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Bypassing the requirement for aminoacyl-tRNA by a cyclodipeptide synthase enzyme.
Rsc Chem Biol, 2, 2021
6ZTU
DownloadVisualize
BU of 6ztu by Molmil
Crystal structure of a cyclodipeptide synthase from Bacillus thermoamylovorans
Descriptor: (2S)-hexane-1,2-diol, Cyclodipeptide synthase, BtCDPS
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2020-07-20
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Bypassing the requirement for aminoacyl-tRNA by a cyclodipeptide synthase enzyme.
Rsc Chem Biol, 2, 2021
6ZU3
DownloadVisualize
BU of 6zu3 by Molmil
Crystal structure of a cyclodipeptide synthase from Bacillus thermoamylovorans
Descriptor: Cyclodipeptide synthase, BtCDPS
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2020-07-21
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Bypassing the requirement for aminoacyl-tRNA by a cyclodipeptide synthase enzyme.
Rsc Chem Biol, 2, 2021
8PZ0
DownloadVisualize
BU of 8pz0 by Molmil
Intracellular leucine aminopeptidase of Pseudomonas aeruginosa PA14.
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, CHLORIDE ION, ...
Authors:Simpson, M.C, Czekster, C.M, Harding, C.J.
Deposit date:2023-07-26
Release date:2023-11-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unveiling the Catalytic Mechanism of a Processive Metalloaminopeptidase.
Biochemistry, 62, 2023
8PZM
DownloadVisualize
BU of 8pzm by Molmil
Intracellular leucine aminopeptidase of Pseudomonas aeruginosa PA14 bound to bestatin inhibitor and manganese
Descriptor: 1,2-ETHANEDIOL, 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, BICARBONATE ION, ...
Authors:Simpson, M.C, Czekster, C.M, Harding, C.J.
Deposit date:2023-07-27
Release date:2023-11-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Unveiling the Catalytic Mechanism of a Processive Metalloaminopeptidase.
Biochemistry, 62, 2023
8PZY
DownloadVisualize
BU of 8pzy by Molmil
Intracellular leucine aminopeptidase of Pseudomonas aeruginosa PA14 - hexameric assembly with manganese bound
Descriptor: 1,2-ETHANEDIOL, 2-[3-[3-(2-hydroxyethoxy)propoxy]propoxy]ethanol, AMMONIUM ION, ...
Authors:Simpson, M.C, Czekster, C.M, Harding, C.J.
Deposit date:2023-07-27
Release date:2023-11-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Unveiling the Catalytic Mechanism of a Processive Metalloaminopeptidase.
Biochemistry, 62, 2023
8ACK
DownloadVisualize
BU of 8ack by Molmil
Structure of Pseudomonas aeruginosa aminopeptidase, PaAP
Descriptor: CACODYLATE ION, Keratinase KP1, PCP, ...
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2022-07-05
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.784 Å)
Cite:An anti-biofilm cyclic peptide targets a secreted aminopeptidase from P. aeruginosa.
Nat.Chem.Biol., 19, 2023
8ACR
DownloadVisualize
BU of 8acr by Molmil
Structure of Pseudomonas aeruginosa aminopeptidase, PaAP
Descriptor: Keratinase KP1, SODIUM ION, ZINC ION
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2022-07-06
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An anti-biofilm cyclic peptide targets a secreted aminopeptidase from P. aeruginosa.
Nat.Chem.Biol., 19, 2023
8ACG
DownloadVisualize
BU of 8acg by Molmil
Structure of Pseudomonas aeruginosa aminopeptidase, PaAP_T E340A mutant
Descriptor: Keratinase KP1, MAGNESIUM ION, ZINC ION
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2022-07-05
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:An anti-biofilm cyclic peptide targets a secreted aminopeptidase from P. aeruginosa.
Nat.Chem.Biol., 19, 2023
8AC7
DownloadVisualize
BU of 8ac7 by Molmil
Structure of Pseudomonas aeruginosa aminopeptidase, PaAP
Descriptor: ACETATE ION, ISOPROPYL ALCOHOL, Keratinase KP1, ...
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2022-07-05
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:An anti-biofilm cyclic peptide targets a secreted aminopeptidase from P. aeruginosa.
Nat.Chem.Biol., 19, 2023
8AC9
DownloadVisualize
BU of 8ac9 by Molmil
Structure of Pseudomonas aeruginosa aminopeptidase, PaAP_T
Descriptor: Keratinase KP1, ZINC ION
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2022-07-05
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:An anti-biofilm cyclic peptide targets a secreted aminopeptidase from P. aeruginosa.
Nat.Chem.Biol., 19, 2023
7QAT
DownloadVisualize
BU of 7qat by Molmil
Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, E174L
Descriptor: Cyclodipeptide synthase
Authors:Sutherland, E, Harding, C.J, Czekster, C.M.
Deposit date:2021-11-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Commun Chem, 5, 2022
7QAW
DownloadVisualize
BU of 7qaw by Molmil
Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, Y189F mutant
Descriptor: Cyclodipeptide synthase
Authors:Sutherland, E, Harding, C.J, Czekster, C.M.
Deposit date:2021-11-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Commun Chem, 5, 2022
7QAX
DownloadVisualize
BU of 7qax by Molmil
Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, E171Q mutant
Descriptor: Cyclodipeptide synthase
Authors:Sutherland, E, Harding, C.J, Czekster, C.M.
Deposit date:2021-11-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.089 Å)
Cite:Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Commun Chem, 5, 2022
7QAU
DownloadVisualize
BU of 7qau by Molmil
Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, D58N mutant
Descriptor: Cyclodipeptide synthase
Authors:Sutherland, E, Harding, C.J, Czekster, C.M.
Deposit date:2021-11-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Commun Chem, 5, 2022
7QAQ
DownloadVisualize
BU of 7qaq by Molmil
Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, E174A mutant
Descriptor: Cyclodipeptide synthase
Authors:Sutherland, E, Harding, C.J, Czekster, C.M.
Deposit date:2021-11-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Commun Chem, 5, 2022
7QB8
DownloadVisualize
BU of 7qb8 by Molmil
Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, WT form
Descriptor: Cyclodipeptide synthase
Authors:Sutherland, E, Harding, C.J, Czekster, C.M.
Deposit date:2021-11-18
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Commun Chem, 5, 2022
7QAY
DownloadVisualize
BU of 7qay by Molmil
Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, Y55F mutant
Descriptor: Cyclodipeptide synthase
Authors:Sutherland, E, Harding, C.J, Czekster, C.M.
Deposit date:2021-11-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Commun Chem, 5, 2022
8PQR
DownloadVisualize
BU of 8pqr by Molmil
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 WT bound to DAD_Immucillin-H
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, Nucleoside 2-deoxyribosyltransferase
Authors:Tang, P, Harding, C.J, Czekster, C.M.
Deposit date:2023-07-11
Release date:2024-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.586 Å)
Cite:Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024

 

12>

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon