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PDB: 41 results

6WYA
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BU of 6wya by Molmil
RTX (Reverse Transcription Xenopolymerase) in complex with a DNA duplex and dAMPNPP
Descriptor: 1,2-ETHANEDIOL, 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Choi, W.S, He, P, Pothukuchy, A, Gollihar, J, Ellington, A.D, Yang, W.
Deposit date:2020-05-12
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:How a B family DNA polymerase has been evolved to copy RNA.
Proc.Natl.Acad.Sci.USA, 117, 2020
6WYB
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BU of 6wyb by Molmil
RTX (Reverse Transcription Xenopolymerase) in complex with an RNA/DNA hybrid
Descriptor: 1,2-ETHANEDIOL, 3,3',3''-phosphanetriyltripropanoic acid, DNA polymerase, ...
Authors:Choi, W.S, He, P, Pothukuchy, A, Gollihar, J, Ellington, A.D, Yang, W.
Deposit date:2020-05-12
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:How a B family DNA polymerase has been evolved to copy RNA.
Proc.Natl.Acad.Sci.USA, 117, 2020
7LBX
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BU of 7lbx by Molmil
Crystal structure of TFAM (mitochondrial transcription factor A) in complex with LSP
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*TP*TP*AP*AP*CP*AP*GP*TP*CP*AP*CP*CP*CP*CP*CP*CP*AP*AP*CP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*AP*GP*TP*TP*GP*GP*GP*GP*GP*GP*TP*GP*AP*CP*TP*GP*TP*TP*AP*A)-3'), ...
Authors:Choi, W.S, Garcia-Diaz, M.
Deposit date:2021-01-09
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A minimal motif for sequence recognition by mitochondrial transcription factor A (TFAM).
Nucleic Acids Res., 50, 2022
7LBW
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BU of 7lbw by Molmil
Crystal structure of TFAM (mitochondrial transcription factor A) bridging two non-sequence specific DNA substrates
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(P*TP*AP*GP*CP*CP*TP*TP*TP*CP*TP*AP*TP*TP*AP*GP*CP*TP*CP*TP*TP*AP*G)-3'), ...
Authors:Choi, W.S, Garcia-Diaz, M.
Deposit date:2021-01-09
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:A minimal motif for sequence recognition by mitochondrial transcription factor A (TFAM).
Nucleic Acids Res., 50, 2022
8G17
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BU of 8g17 by Molmil
CryoEM structure of wild-type GAPDH
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Choi, W.Y, Wu, H, Cheng, Y.F.
Deposit date:2023-02-01
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (1.98 Å)
Cite:Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G13
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BU of 8g13 by Molmil
CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Choi, W.Y, Wu, H, Cheng, Y.F.
Deposit date:2023-02-01
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G12
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BU of 8g12 by Molmil
CryoEM structure of nuclear GAPDH under 8h Oxidative Stress
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Choi, W.Y, Wu, H, Cheng, Y.F.
Deposit date:2023-02-01
Release date:2023-12-27
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.17 Å)
Cite:Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G15
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BU of 8g15 by Molmil
CryoEM structure of nuclear GAPDH under 24h Oxidative Stress
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Choi, W.Y, Wu, H, Cheng, Y.F.
Deposit date:2023-02-01
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.07 Å)
Cite:Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G16
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BU of 8g16 by Molmil
CryoEM structure of cytoplasmic GAPDH under 24h Oxidative Stress
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Choi, W.Y, Wu, H, Cheng, Y.F.
Deposit date:2023-02-01
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.07 Å)
Cite:Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G14
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BU of 8g14 by Molmil
CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress, class2
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Choi, W.Y, Wu, H, Cheng, Y.F.
Deposit date:2023-02-01
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
7KQN
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BU of 7kqn by Molmil
Ternary complex of TERT (telomerase reverse transcriptase) with RNA template, DNA primer, an incoming dGTP and a downstream hybrid duplex
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Choi, W.S, Weng, P.J, Yang, W.
Deposit date:2020-11-17
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Flexibility of telomerase in binding the RNA template and DNA telomeric repeat.
Proc.Natl.Acad.Sci.USA, 119, 2022
7KQM
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BU of 7kqm by Molmil
Binary complex of TERT (telomerase reverse transcriptase) with RNA/telomeric DNA hybrid
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*TP*TP*CP*TP*TP*TP*GP*TP*GP*CP*AP*CP*CP*TP*G)-3'), ...
Authors:Choi, W.S, Weng, P.J, Yang, W.
Deposit date:2020-11-17
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Flexibility of telomerase in binding the RNA template and DNA telomeric repeat.
Proc.Natl.Acad.Sci.USA, 119, 2022
7KYQ
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BU of 7kyq by Molmil
Crystal structure of human BCCIP beta (Native1)
Descriptor: BRCA2 and CDKN1A-interacting protein
Authors:Choi, W.S, Liu, B, Shen, Z, Yang, W.
Deposit date:2020-12-08
Release date:2021-06-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Structure of human BCCIP and implications for binding and modification of partner proteins.
Protein Sci., 30, 2021
7KYS
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BU of 7kys by Molmil
Crystal structure of human BCCIP beta (Native2)
Descriptor: 1,2-ETHANEDIOL, BRCA2 and CDKN1A-interacting protein, DI(HYDROXYETHYL)ETHER
Authors:Choi, W.S, Liu, B, Shen, Z, Yang, W.
Deposit date:2020-12-08
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human BCCIP and implications for binding and modification of partner proteins.
Protein Sci., 30, 2021
2XXN
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BU of 2xxn by Molmil
Structure of the vIRF4-HAUSP TRAF domain complex
Descriptor: K10, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7
Authors:Choi, W.C, Hwang, J, Kim, M.H.
Deposit date:2010-11-11
Release date:2011-11-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Bilateral Inhibition of Hausp Deubiquitinase by a Viral Interferon Regulatory Factor Protein
Nat.Struct.Mol.Biol., 18, 2011
3NIL
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BU of 3nil by Molmil
The structure of UBR box (RDAA)
Descriptor: ACETATE ION, E3 ubiquitin-protein ligase UBR1, Peptide RDAA, ...
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIS
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BU of 3nis by Molmil
The structure of UBR box (native2)
Descriptor: ACETATE ION, E3 ubiquitin-protein ligase UBR1, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
4CAK
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BU of 4cak by Molmil
Three-dimensional reconstruction of intact human integrin alphaIIbbeta3 in a phospholipid bilayer nanodisc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin alpha-IIb, ...
Authors:Choi, W.S, Rice, W.J, Stokes, D.L, Coller, B.S.
Deposit date:2013-10-08
Release date:2013-10-30
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (20.5 Å)
Cite:Three-Dimensional Reconstruction of Intact Human Integrin Alphaiibbeta3; New Implications for Activation-Dependent Ligand Binding.
Blood, 122, 2013
3E57
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BU of 3e57 by Molmil
Crystal structure of Tm1382, a putative Nudix hydrolase
Descriptor: uncharacterized protein Tm1382
Authors:Choi, W, Cooper, D.R, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2008-08-13
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of Tm1382, a putative Nudix hydrolase
To be Published
3NIH
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BU of 3nih by Molmil
The structure of UBR box (RIAAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RIAAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIK
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BU of 3nik by Molmil
The structure of UBR box (REAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide REAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NII
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BU of 3nii by Molmil
The structure of UBR box (KIAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide KIAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIJ
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BU of 3nij by Molmil
The structure of UBR box (HIAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide HIAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIM
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BU of 3nim by Molmil
The structure of UBR box (RRAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RRAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIN
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BU of 3nin by Molmil
The structure of UBR box (RLGES)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RLGES, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010

 

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