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PDB: 831 件

4F4M
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Structure of the type VI peptidoglycan amidase effector Tse1 (C30A) from Pseudomonas aeruginosa
分子名称: papain peptidoglycan amidase effector Tse1
著者Chou, S, Mougous, J.D.
登録日2012-05-10
公開日2012-05-30
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (2.677 Å)
主引用文献Structure of a peptidoglycan amidase effector targeted to Gram-negative bacteria by the type VI secretion system.
Cell Rep, 1, 2012
1D69
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SOLUTION STRUCTURE OF [D(ATGAGCGAATA)]2: ADJACENT G:A MISMATCHES STABILIZED BY CROSS-STRAND BASE-STACKING AND BII PHOSPHATE GROUPS
分子名称: DNA (5'-D(P*AP*TP*GP*AP*GP*CP*GP*AP*AP*TP*A)-3')
著者Chou, S.-H, Cheng, J.-W, Reid, B.R.
登録日1992-04-15
公開日1993-04-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of [d(ATGAGCGAATA)]2. Adjacent G:A mismatches stabilized by cross-strand base-stacking and BII phosphate groups.
J.Mol.Biol., 228, 1992
1L1V
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UNUSUAL ACTD/DNA_TA COMPLEX STRUCTURE
分子名称: 5'-D(*GP*TP*CP*AP*CP*CP*GP*AP*C)-3', ACTINOMYCIN D
著者Chou, S.-H, Chin, K.-H, Chen, F.-M.
登録日2002-02-20
公開日2002-03-06
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Looped Out and Perpendicular: Deformation of Watson-Crick Base Pair Associated with Actinomycin D Binding.
Proc.Natl.Acad.Sci.USA, 99, 2002
4EOB
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BU of 4eob by Molmil
Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa
分子名称: type VI amidase effector Tse1
著者Chou, S, Mougous, J.D.
登録日2012-04-13
公開日2012-05-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Structure of a peptidoglycan amidase effector targeted to Gram-negative bacteria by the type VI secretion system.
Cell Rep, 1, 2012
103D
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THE UNUSUAL STRUCTURE OF THE HUMAN CENTROMERE (GGA)2 MOTIF: UNPAIRED GUANOSINE RESIDUES STACKED BETWEEN SHEARED G(DOT)A PAIRS
分子名称: DNA (5'-D(*GP*TP*GP*GP*AP*AP*TP*GP*GP*AP*AP*C)-3')
著者Chou, S.-H, Zhu, L, Reid, B.R.
登録日1994-12-16
公開日1995-03-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The unusual structure of the human centromere (GGA)2 motif. Unpaired guanosine residues stacked between sheared G.A pairs.
J.Mol.Biol., 244, 1994
3IIN
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Plasticity of the kink turn structural motif
分子名称: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3'), DNA/RNA (5'-R(*CP*A)-D(P*T)-3'), Group I intron, ...
著者Lipchock, S.V, Strobel, S.A, Antonioli, A.H, Cochrane, J.C.
登録日2009-08-02
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (4.18 Å)
主引用文献Plasticity of the RNA kink turn structural motif.
Rna, 16, 2010
3JZA
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Crystal structure of human Rab1b in complex with the GEF domain of DrrA/SidM from Legionella pneumophila
分子名称: PHOSPHATE ION, Ras-related protein Rab-1B, Uncharacterized protein DrrA
著者Schoebel, S, Oesterlin, L.K, Blankenfeldt, W, Goody, R.S, Itzen, A.
登録日2009-09-23
公開日2010-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献RabGDI displacement by DrrA from Legionella is a consequence of its guanine nucleotide exchange activity.
Mol.Cell, 36, 2009
3JZ9
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Crystal structure of the GEF domain of DrrA/SidM from Legionella pneumophila
分子名称: Uncharacterized protein DrrA
著者Schoebel, S, Oesterlin, L.K, Blankenfeldt, W, Goody, R.S, Itzen, A.
登録日2009-09-23
公開日2010-01-19
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献RabGDI displacement by DrrA from Legionella is a consequence of its guanine nucleotide exchange activity.
Mol.Cell, 36, 2009
1BJH
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HAIRPIN LOOPS CONSISTING OF SINGLE ADENINE RESIDUES CLOSED BY SHEARED A(DOT)A AND G(DOT)G PAIRS FORMED BY THE DNA TRIPLETS AAA AND GAG: SOLUTION STRUCTURE OF THE D(GTACAAAGTAC) HAIRPIN, NMR, 16 STRUCTURES
分子名称: DNA (5'-D(*GP*TP*AP*CP*AP*AP*AP*GP*TP*AP*C)-3')
著者Chou, S.-H, Zhu, L, Gao, Z, Cheng, J.-W, Reid, B.R.
登録日1997-07-25
公開日1997-12-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Hairpin loops consisting of single adenine residues closed by sheared A.A and G.G pairs formed by the DNA triplets AAA and GAG: solution structure of the d(GTACAAAGTAC) hairpin.
J.Mol.Biol., 264, 1996
3N6O
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Crystal structure of the GEF and P4M domain of DrrA/SidM from Legionella pneumophila
分子名称: SULFATE ION, guanine nucleotide exchange factor
著者Schoebel, S, Blankenfeldt, W, Goody, R.S, Itzen, A.
登録日2010-05-26
公開日2010-07-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献High-affinity binding of phosphatidylinositol 4-phosphate by Legionella pneumophila DrrA.
Embo Rep., 11, 2010
3J4R
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Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy
分子名称: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit
著者Reichow, S.L, Gonen, T.
登録日2013-09-25
公開日2013-11-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation.
Elife, 2, 2013
3J4Q
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Pseudo-atomic model of the AKAP18-PKA complex in a bent conformation derived from electron microscopy
分子名称: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit
著者Reichow, S.L, Gonen, T.
登録日2013-09-25
公開日2013-11-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation.
Elife, 2, 2013
3J41
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Pseudo-atomic model of the Aquaporin-0/Calmodulin complex derived from electron microscopy
分子名称: CALCIUM ION, Calmodulin, Lens fiber major intrinsic protein
著者Reichow, S.L, Clemens, D.M, Freites, J.A, Nemeth-Cahalan, K.L, Heyden, M, Tobias, D.J, Hall, J.E, Gonen, T.
登録日2013-05-31
公開日2013-07-31
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (25 Å)
主引用文献Allosteric mechanism of water-channel gating by Ca(2+)-calmodulin.
Nat.Struct.Mol.Biol., 20, 2013
3M4U
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Crystal Structure of Trypanosoma brucei Protein Tyrosine Phosphatase TbPTP1
分子名称: PHOSPHATE ION, Tyrosine specific protein phosphatase, putative
著者Chou, S, Alber, T, Grundner, C.
登録日2010-03-12
公開日2010-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.392 Å)
主引用文献The Trypanosoma brucei life cycle switch TbPTP1 is structurally conserved and dephosphorylates the nucleolar protein NOPP44/46.
J.Biol.Chem., 285, 2010
3MHX
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Crystal Structure of Stenotrophomonas maltophilia FeoA complexed with Zinc: A Unique Procaryotic SH3 Domain Protein Possibly Acting as a Bacterial Ferrous Iron Transport Activating Factor
分子名称: ACETATE ION, CHLORIDE ION, Putative ferrous iron transport protein A, ...
著者Chou, S.-H, Su, Y.-C, Chin, K.-H, Hung, H.-C, Shen, G.-H, Wang, A.H.-J.
登録日2010-04-09
公開日2010-06-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of Stenotrophomonas maltophilia FeoA complexed with zinc: a unique prokaryotic SH3-domain protein that possibly acts as a bacterial ferrous iron-transport activating factor
Acta Crystallogr.,Sect.F, 66, 2010
7E42
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Solution strucutre of holo acyl carrier protein from Acinetobacter baumannii
分子名称: Acyl carrier protein
著者Choi, S, Park, J, Kim, Y.
登録日2021-02-10
公開日2022-02-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献solution structure of holo acyl carrier protein in acinetobacter baumannii
To Be Published
2GJF
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NMR structure of the computationally designed procarboxypeptidase-A (1AYE) domain
分子名称: DESIGNED PROTEIN
著者Reichow, S.
登録日2006-03-30
公開日2007-01-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献High-resolution structural and thermodynamic analysis of extreme stabilization of human procarboxypeptidase by computational protein design.
J.Mol.Biol., 366, 2007
3TNF
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LidA from Legionella in complex with active Rab8a
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, LidA, MAGNESIUM ION, ...
著者Schoebel, S, Cichy, A.L, Goody, R.S, Itzen, A.
登録日2011-09-01
公開日2011-11-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein LidA from Legionella is a Rab GTPase supereffector.
Proc.Natl.Acad.Sci.USA, 108, 2011
3RMR
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Crystal structure of Hyaloperonospora arabidopsidis ATR1 effector domain
分子名称: Avirulence protein
著者Chou, S, Krasileva, K.V, Holton, J.M, Staskawicz, B.J, Alber, T.
登録日2011-04-21
公開日2011-07-20
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Hyaloperonospora arabidopsidis ATR1 effector has distributed recognition surfaces and a structural subdomain conserved across oomycete species
To be Published
6XRP
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Crystal structure of GlpG in complex with peptide ketoamide inhibitor, Ac-RVWHA-ketoamide-phenylbutyl
分子名称: N-(4-phenylbutyl)formamide, Rhomboid protease GlpG, peptide ketoamide inhibitor
著者Urban, S, Cho, S.
登録日2020-07-13
公開日2020-09-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
6XRO
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Crystal structure of GlpG in complex with peptide boronate inhibitor, Ac-KRFRSMQYSA-B(OH)2
分子名称: CHLORIDE ION, Rhomboid protease GlpG, SODIUM ION, ...
著者Urban, S, Cho, S.
登録日2020-07-13
公開日2020-09-16
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
3MC0
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BU of 3mc0 by Molmil
Crystal Structure of Staphylococcal Enterotoxin G (SEG) in Complex with a Mouse T-cell Receptor beta Chain
分子名称: ACETATE ION, Enterotoxin SEG, variable beta 8.2 mouse T cell receptor
著者Fernandez, M.M, Cho, S, Robinson, H, Mariuzza, R.A, Malchiodi, E.L.
登録日2010-03-26
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of staphylococcal enterotoxin G (SEG) in complex with a mouse T-cell receptor {beta} chain.
J.Biol.Chem., 286, 2011
4R2Y
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Crystal structure of APC11 RING domain
分子名称: Anaphase-promoting complex subunit 11, ZINC ION
著者Brown, N.G, Watson, E.R, Weissmann, F, Jarvis, M.A, Vanderlinden, R, Grace, C.R.R, Frye, J.J, Dube, P, Qiao, R, Petzold, G, Cho, S.E, Alsharif, O, Bao, J, Zheng, J, Nourse, A, Kurinov, I, Peters, J.M, Stark, H, Schulman, B.A.
登録日2014-08-13
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献Mechanism of Polyubiquitination by Human Anaphase-Promoting Complex: RING Repurposing for Ubiquitin Chain Assembly.
Mol.Cell, 56, 2014
8H50
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Crystal structure of carboxyspermidine dehydrogenase from Helicobacter pylori in space group C2221
分子名称: Saccharopine dehydrogenase
著者Ko, K.Y, Park, S.C, Cho, S.Y, Yoon, S.I.
登録日2022-10-11
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural analysis of carboxyspermidine dehydrogenase from Helicobacter pylori.
Biochem.Biophys.Res.Commun., 635, 2022
8H52
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Crystal structure of Helicobacter pylori carboxyspermidine dehydrogenase in complex with NADP
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Saccharopine dehydrogenase
著者Ko, K.Y, Park, S.C, Cho, S.Y, Yoon, S.I.
登録日2022-10-11
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural analysis of carboxyspermidine dehydrogenase from Helicobacter pylori.
Biochem.Biophys.Res.Commun., 635, 2022

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