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PDB: 904 件

7X9D
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DNMT3B in complex with harmine
分子名称: 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3B
著者Cho, C.-C, Yuan, H.S.
登録日2022-03-15
公開日2023-03-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Mechanistic Insights into Harmine-Mediated Inhibition of Human DNA Methyltransferases and Prostate Cancer Cell Growth.
Acs Chem.Biol., 18, 2023
8JUW
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Human ATAD2 Walker B mutant-H3/H4K5Q complex, ATP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATPase family AAA domain-containing protein 2
著者Cho, C, Song, J.
登録日2023-06-27
公開日2023-10-18
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Structure of the human ATAD2 AAA+ histone chaperone reveals mechanism of regulation and inter-subunit communication.
Commun Biol, 6, 2023
8JUZ
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Human ATAD2 Walker B mutant-H3/H4K5Q complex, ATP state (Class III)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATPase family AAA domain-containing protein 2
著者Cho, C, Song, J.
登録日2023-06-27
公開日2023-10-18
実験手法ELECTRON MICROSCOPY (4.29 Å)
主引用文献Structure of the human ATAD2 AAA+ histone chaperone reveals mechanism of regulation and inter-subunit communication.
Commun Biol, 6, 2023
8JUY
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Human ATAD2 Walker B mutant-H3/H4K5Q complex, ATP state (Class II)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATPase family AAA domain-containing protein 2
著者Cho, C, Song, J.
登録日2023-06-27
公開日2023-10-18
実験手法ELECTRON MICROSCOPY (4.34 Å)
主引用文献Structure of the human ATAD2 AAA+ histone chaperone reveals mechanism of regulation and inter-subunit communication.
Commun Biol, 6, 2023
5YBA
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Dimeric Cyclophilin from T.vaginalis in complex with Myb1 peptide
分子名称: Myb1 peptide, Peptidyl-prolyl cis-trans isomerase
著者Cho, C.C, Lin, M.H, Martin, T, Chou, C.C, Chen, C, Hsu, C.H.
登録日2017-09-04
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.062 Å)
主引用文献Structural basis of interaction between dimeric cyclophilin 1 and Myb1 transcription factor in Trichomonas vaginalis
Sci Rep, 8, 2018
5YB9
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Crystal structure of a dimeric cyclophilin A from T.vaginalis
分子名称: Peptidyl-prolyl cis-trans isomerase
著者Cho, C.C, Lin, M.H, Chou, C.C, Martin, T, Chen, C, Hsu, C.H.
登録日2017-09-04
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.276 Å)
主引用文献Structural basis of interaction between dimeric cyclophilin 1 and Myb1 transcription factor in Trichomonas vaginalis
Sci Rep, 8, 2018
5DUS
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Crystal structure of MERS-CoV macro domain in complex with ADP-ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, GLYCEROL, ORF1a, ...
著者Cho, C.-C, Lin, M.-H, Chuang, C.-Y, Hsu, C.-H.
登録日2015-09-20
公開日2016-01-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.432 Å)
主引用文献Macro Domain from Middle East Respiratory Syndrome Coronavirus (MERS-CoV) Is an Efficient ADP-ribose Binding Module: CRYSTAL STRUCTURE AND BIOCHEMICAL STUDIES
J.Biol.Chem., 291, 2016
8H3H
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Human ATAD2 Walker B mutant, ATP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATPase family AAA domain-containing protein 2
著者Cho, C, Song, J.
登録日2022-10-08
公開日2023-10-18
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structure of the human ATAD2 AAA+ histone chaperone reveals mechanism of regulation and inter-subunit communication.
Commun Biol, 6, 2023
5ZDA
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Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) from Deinococcus radiodurans in apo form
分子名称: SULFATE ION, poly ADP-ribose glycohydrolase
著者Cho, C.C, Hsu, C.H.
登録日2018-02-23
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.548 Å)
主引用文献Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.
Nat Commun, 10, 2019
5ZDD
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Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) from Deinococcus radiodurans in complex with ADP-ribose (P212121)
分子名称: PHOSPHATE ION, Poly ADP-ribose glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Cho, C.C, Hsu, C.H.
登録日2018-02-23
公開日2019-02-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.725 Å)
主引用文献Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.
Nat Commun, 10, 2019
5ZDF
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Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) T267K mutant from Deinococcus radiodurans in complex with ADP-ribose
分子名称: Poly ADP-ribose glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Cho, C.C, Hsu, C.H.
登録日2018-02-23
公開日2019-02-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.504 Å)
主引用文献Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.
Nat Commun, 10, 2019
5ZDB
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Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) from Deinococcus radiodurans in complex with ADP-ribose (P21)
分子名称: Poly ADP-ribose glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Cho, C.C, Hsu, C.H.
登録日2018-02-23
公開日2019-02-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.972 Å)
主引用文献Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.
Nat Commun, 10, 2019
5ZDE
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BU of 5zde by Molmil
Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) from Deinococcus radiodurans in complex with ADP-ribose (P3221)
分子名称: Poly ADP-ribose glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Cho, C.C, Hsu, C.H.
登録日2018-02-23
公開日2019-02-27
最終更新日2020-03-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.
Nat Commun, 10, 2019
6JPQ
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CryoEM structure of Abo1 hexamer - ADP complex
分子名称: Uncharacterized AAA domain-containing protein C31G5.19
著者Cho, C, Jang, J, Song, J.J.
登録日2019-03-27
公開日2020-08-19
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.44 Å)
主引用文献Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
6JPU
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CryoEM structure of Abo1 hexamer - apo complex
分子名称: Uncharacterized AAA domain-containing protein C31G5.19
著者Cho, C, Jang, J, Song, J.J.
登録日2019-03-28
公開日2019-12-25
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
5ZDC
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BU of 5zdc by Molmil
Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) from Deinococcus radiodurans in complex with ADP-ribose (P32)
分子名称: PHOSPHATE ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE, poly ADP-ribose glycohydrolase
著者Cho, C.C, Hsu, C.H.
登録日2018-02-23
公開日2019-02-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.979 Å)
主引用文献Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.
Nat Commun, 10, 2019
5ZDG
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BU of 5zdg by Molmil
Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) T267R mutant from Deinococcus radiodurans in complex with ADP-ribose
分子名称: Poly APD-ribose glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Cho, C.C, Hsu, C.H.
登録日2018-02-23
公開日2019-02-27
最終更新日2020-03-11
実験手法X-RAY DIFFRACTION (2.594 Å)
主引用文献Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.
Nat Commun, 10, 2019
8XEE
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Human DNMT3B mutant-R823G
分子名称: DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE
著者Cho, C.-C, Yuan, H.S.
登録日2023-12-11
公開日2024-10-23
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Molecular mechanisms for DNA methylation defects induced by ICF syndrome-linked mutations in DNMT3B.
Protein Sci., 33, 2024
6JQ0
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CryoEM structure of Abo1 Walker B (E372Q) mutant hexamer - ATP complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Uncharacterized AAA domain-containing protein C31G5.19, ...
著者Cho, C, Jang, J, Song, J.J.
登録日2019-03-28
公開日2019-12-25
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
2MRD
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BU of 2mrd by Molmil
Solution structure of human Ca2+-loaded S100A4 cys-free mutant
分子名称: Protein S100-A4
著者Cho, C.C, Hung, K.W, Yu, C.
登録日2014-07-03
公開日2015-07-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The solution structure of human calcium-bound S100A4 mutated at four cysteine loci
J.Biomol.Nmr, 62, 2015
3QMZ
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BU of 3qmz by Molmil
Crystal structure of the cytoplasmic dynein heavy chain motor domain
分子名称: Cytoplasmic dynein heavy chain, Glutathione-S-transferase
著者Cho, C, Carter, A.P, Jin, L, Vale, R.D.
登録日2011-02-07
公開日2011-03-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献Crystal structure of the dynein motor domain.
Science, 331, 2011
8J46
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Human Consensus Olfactory Receptor OR52c in apo state, OR52c-bRIL
分子名称: Olfactory receptor OR52c,Soluble cytochrome b562
著者Choi, C.W, Bae, J, Choi, H.-J, Kim, J.
登録日2023-04-19
公開日2023-12-20
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Understanding the molecular mechanisms of odorant binding and activation of the human OR52 family.
Nat Commun, 14, 2023
8W77
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Human Consensus Olfactory Receptor OR52c in apo state, OR52c only
分子名称: Human Consensus Olfactory Receptor OR52c in apo state, receptor only,Soluble cytochrome b562
著者Choi, C.W, Bae, J, Choi, H.-J, Kim, J.
登録日2023-08-30
公開日2023-12-20
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献Understanding the molecular mechanisms of odorant binding and activation of the human OR52 family.
Nat Commun, 14, 2023
8HTI
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Human Consensus Olfactory Receptor OR52c in Complex with Octanoic Acid (OCA) and G Protein
分子名称: Consensus Olfactory Receptor OR52c, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Choi, C.W, Bae, J, Choi, H.-J, Kim, J.
登録日2022-12-21
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Understanding the molecular mechanisms of odorant binding and activation of the human OR52 family.
Nat Commun, 14, 2023
7JJV
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Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice
分子名称: GrAFP antifreeze protein
著者Scholl, C.L, Tsuda, S, Graham, L.A, Davies, P.L.
登録日2020-07-27
公開日2021-01-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice.
Febs J., 288, 2021

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