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8JUW

Human ATAD2 Walker B mutant-H3/H4K5Q complex, ATP state

Summary for 8JUW
Entry DOI10.2210/pdb8juw/pdb
Related8H3H
EMDB information34468 36665
DescriptorATPase family AAA domain-containing protein 2, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE (3 entities in total)
Functional Keywordshistone chaperone, aaa+ atpase, gene regulation
Biological sourceHomo sapiens (human)
More
Total number of polymer chains6
Total formula weight565105.54
Authors
Cho, C.,Song, J. (deposition date: 2023-06-27, release date: 2023-10-18)
Primary citationCho, C.,Ganser, C.,Uchihashi, T.,Kato, K.,Song, J.J.
Structure of the human ATAD2 AAA+ histone chaperone reveals mechanism of regulation and inter-subunit communication.
Commun Biol, 6:993-993, 2023
Cited by
PubMed Abstract: ATAD2 is a non-canonical ATP-dependent histone chaperone and a major cancer target. Despite widespread efforts to design drugs targeting the ATAD2 bromodomain, little is known about the overall structural organization and regulation of ATAD2. Here, we present the 3.1 Å cryo-EM structure of human ATAD2 in the ATP state, showing a shallow hexameric spiral that binds a peptide substrate at the central pore. The spiral conformation is locked by an N-terminal linker domain (LD) that wedges between the seam subunits, thus limiting ATP-dependent symmetry breaking of the AAA+ ring. In contrast, structures of the ATAD2-histone H3/H4 complex show the LD undocked from the seam, suggesting that H3/H4 binding unlocks the AAA+ spiral by allosterically releasing the LD. These findings, together with the discovery of an inter-subunit signaling mechanism, reveal a unique regulatory mechanism for ATAD2 and lay the foundation for developing new ATAD2 inhibitors.
PubMed: 37770645
DOI: 10.1038/s42003-023-05373-1
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.79 Å)
Structure validation

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