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PDB: 156 results

8UYP
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BU of 8uyp by Molmil
SARS-CoV-1 5' proximal stem-loop 5
Descriptor: SARS-CoV-1 5' proximal stem-loop 5
Authors:Kretsch, R.C, Xu, L, Zheludev, I.N, Zhou, X, Huang, R, Nye, G, Li, S, Zhang, K, Chiu, W, Das, R.
Deposit date:2023-11-13
Release date:2023-12-20
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses.
Proc.Natl.Acad.Sci.USA, 121, 2024
2YEW
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BU of 2yew by Molmil
Modeling Barmah Forest virus structural proteins
Descriptor: CAPSID PROTEIN, E1 ENVELOPE GLYCOPROTEIN, E2 ENVELOPE GLYCOPROTEIN
Authors:Kostyuchenko, V.A, Jakana, J, Liu, X, Haddow, A.D, Aung, M, Weaver, S.C, Chiu, W, Lok, S.M.
Deposit date:2011-03-31
Release date:2012-04-18
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (5 Å)
Cite:The Structure of Barmah Forest Virus as Revealed by Cryo-Electron Microscopy at a 6-Angstrom Resolution Has Detailed Transmembrane Protein Architecture and Interactions.
J.Virol., 85, 2011
6OJN
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BU of 6ojn by Molmil
Comparative Model of SGIV Major Coat Protein (MCP) Trimer Based on Cryo-EM Map
Descriptor: Major capsid protein
Authors:Pintilie, G, Chen, D.-H, Tran, B.N, Jakana, J, Wu, J, Hew, C.L, Chiu, W.
Deposit date:2019-04-11
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Segmentation and Comparative Modeling in an 8.6- angstrom Cryo-EM Map of the Singapore Grouper Iridovirus.
Structure, 27, 2019
7TBH
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BU of 7tbh by Molmil
cryo-EM structure of MBP-KIX-apoferritin complex with peptide 7
Descriptor: Isoform 2 of CREB-binding protein,Ferritin heavy chain, N-terminally processed, LEU-SER-ARG-ARG-PRO-SEP-TYR-ARG-LYS-ILE-LEU-ASN-ASP-LEU-SER-SER-ASP-ALA-PRO
Authors:Zhang, K, Horikoshi, N, Li, S, Powers, A, Hameedi, M, Pintilie, G, Chae, H, Khan, Y, Suomivuori, C, Dror, R, Sakamoto, K, Chiu, W, Wakatsuki, S.
Deposit date:2021-12-22
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Cryo-EM, Protein Engineering, and Simulation Enable the Development of Peptide Therapeutics against Acute Myeloid Leukemia.
Acs Cent.Sci., 8, 2022
7TB3
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cryo-EM structure of MBP-KIX-apoferritin
Descriptor: Isoform 2 of CREB-binding protein,Ferritin heavy chain, N-terminally processed
Authors:Zhang, K, Horikoshi, N, Li, S, Powers, A, Hameedi, M, Pintilie, G, Chae, H, Khan, Y, Suomivuori, C, Dror, R, Sakamoto, K, Chiu, W, Wakatsuki, S.
Deposit date:2021-12-21
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Cryo-EM, Protein Engineering, and Simulation Enable the Development of Peptide Therapeutics against Acute Myeloid Leukemia.
Acs Cent.Sci., 8, 2022
6POM
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BU of 6pom by Molmil
Cryo-EM structure of the full-length Bacillus subtilis glyQS T-box riboswitch in complex with tRNA-Gly
Descriptor: T-box GlyQS leader (155-MER), tRNAGly (75-MER)
Authors:Li, S, Su, Z, Zhang, J, Chiu, W.
Deposit date:2019-07-04
Release date:2019-11-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions.
Nat.Struct.Mol.Biol., 26, 2019
7TUB
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BU of 7tub by Molmil
The beta-tubulin folding intermediate IV
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Zhao, Y, Frydman, J, Chiu, W.
Deposit date:2022-02-02
Release date:2022-12-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
7TRG
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BU of 7trg by Molmil
The beta-tubulin folding intermediate I
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Zhao, Y, Frydman, J, Chiu, W.
Deposit date:2022-01-28
Release date:2022-12-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
7TTN
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BU of 7ttn by Molmil
The beta-tubulin folding intermediate II
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Zhao, Y, Frydman, J, Chiu, W.
Deposit date:2022-02-01
Release date:2022-12-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
7TTT
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BU of 7ttt by Molmil
The beta-tubulin folding intermediate III
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Zhao, Y, Frydman, J, Chiu, W.
Deposit date:2022-02-01
Release date:2022-12-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
7TNT
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BU of 7tnt by Molmil
The tubulin-based conoid from detergent-extract Toxoplasma gondii cells
Descriptor: Tubulin alpha chain, Tubulin beta chain
Authors:Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W.
Deposit date:2022-01-21
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TNS
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BU of 7tns by Molmil
Subpellicular microtubule from detergent-extract Toxoplasma gondii cells
Descriptor: Microtubule associated protein SPM1, PDI family protein, Tubulin alpha chain, ...
Authors:Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W.
Deposit date:2022-01-21
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
3B63
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BU of 3b63 by Molmil
Actin filament model in the extended form of acromsomal bundle in the Limulus sperm
Descriptor: Actin
Authors:Cong, Y, Topf, M, Sali, A, Matsudaira, P, Dougherty, M, Chiu, W, Schmid, M.F.
Deposit date:2007-10-26
Release date:2008-11-18
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Crystallographic conformers of actin in a biologically active bundle of filaments.
J.Mol.Biol., 375, 2008
3B5U
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BU of 3b5u by Molmil
Actin filament model from extended form of acromsomal bundle in the Limulus sperm
Descriptor: Actin, alpha skeletal muscle
Authors:Cong, Y, Topf, M, Sali, A, Matsudaira, P, Dougherty, M, Chiu, W, Schmid, M.F.
Deposit date:2007-10-26
Release date:2008-04-15
Last modified:2024-02-21
Method:ELECTRON CRYSTALLOGRAPHY (9.5 Å)
Cite:Crystallographic conformers of actin in a biologically active bundle of filaments
J.Mol.Biol., 375, 2008
5NG5
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BU of 5ng5 by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: 6-[2-(3,4-dimethoxyphenyl)ethylsulfanyl]-8-[4-(2-methoxyethyl)piperazin-1-yl]-3,3-dimethyl-1,4-dihydropyrano[3,4-c]pyridine-5-carbonitrile, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrA, ...
Authors:Wang, Z, Fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-16
Release date:2017-04-19
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
7EZ0
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BU of 7ez0 by Molmil
Apo L-21 ScaI Tetrahymena ribozyme
Descriptor: Apo L-21 ScaI Tetrahymena ribozyme, MAGNESIUM ION
Authors:Su, Z, Zhang, K, Kappel, K, Luo, B, Das, R, Chiu, W.
Deposit date:2021-06-01
Release date:2021-08-25
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 angstrom resolution.
Nature, 596, 2021
7EZ2
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BU of 7ez2 by Molmil
Holo L-16 ScaI Tetrahymena ribozyme
Descriptor: Holo L-16 ScaI Tetrahymena ribozyme, Holo L-16 ScaI Tetrahymena ribozyme S1, Holo L-16 ScaI Tetrahymena ribozyme S2, ...
Authors:Su, Z, Zhang, K, Kappel, K, Luo, B, Das, R, Chiu, W.
Deposit date:2021-06-01
Release date:2021-08-25
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 angstrom resolution.
Nature, 596, 2021
7XSN
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BU of 7xsn by Molmil
Native Tetrahymena ribozyme conformation
Descriptor: RNA (387-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSM
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BU of 7xsm by Molmil
Misfolded Tetrahymena ribozyme conformation 3
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.01 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSL
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BU of 7xsl by Molmil
Misfolded Tetrahymena ribozyme conformation 2
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSK
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BU of 7xsk by Molmil
Misfolded Tetrahymena ribozyme conformation 1
Descriptor: RNA (388-MER)
Authors:Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
Deposit date:2022-05-14
Release date:2022-08-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
1QVR
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BU of 1qvr by Molmil
Crystal Structure Analysis of ClpB
Descriptor: ClpB protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLATINUM (II) ION
Authors:Lee, S, Sowa, M.E, Watanabe, Y, Sigler, P.B, Chiu, W, Yoshida, M, Tsai, F.T.F.
Deposit date:2003-08-28
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of ClpB: A Molecular Chaperone that Rescues Proteins from an Aggregated State
Cell(Cambridge,Mass.), 115, 2003
1TT9
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BU of 1tt9 by Molmil
Structure of the bifunctional and Golgi associated formiminotransferase cyclodeaminase octamer
Descriptor: Formimidoyltransferase-cyclodeaminase (Formiminotransferase- cyclodeaminase) (FTCD) (58 kDa microtubule-binding protein)
Authors:Mao, Y, Vyas, N.K, Vyas, M.N, Chen, D.H, Ludtke, S.J, Chiu, W, Quiocho, F.A.
Deposit date:2004-06-22
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structure of the bifunctional and Golgi-associated formiminotransferase cyclodeaminase octamer
Embo J., 23, 2004
8TA5
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BU of 8ta5 by Molmil
Title: Cryo-EM structure of the human CLC-2 chloride channel transmembrane domain with asymmetric C-terminal
Descriptor: Chloride channel protein 2
Authors:Xu, M, Neelands, T, Powers, A.S, Liu, Y, Miller, S, Pintilie, G, Du Bois, J, Dror, R.O, Chiu, W, Maduke, M.
Deposit date:2023-06-26
Release date:2024-01-31
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:CryoEM structures of the human CLC-2 voltage-gated chloride channel reveal a ball-and-chain gating mechanism.
Elife, 12, 2024
8TA4
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BU of 8ta4 by Molmil
Cryo-EM structure of the human CLC-2 chloride channel transmembrane domain with symmetric C-terminal
Descriptor: CHLORIDE ION, Chloride channel protein 2
Authors:Xu, M, Neelands, T, Powers, A.S, Liu, Y, Miller, S, Pintilie, G, Du Bois, J, Dror, R.O, Chiu, W, Maduke, M.
Deposit date:2023-06-26
Release date:2024-01-31
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:CryoEM structures of the human CLC-2 voltage-gated chloride channel reveal a ball-and-chain gating mechanism.
Elife, 12, 2024

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PDB entries from 2024-08-21

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