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PDB: 70 results

8A11
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BU of 8a11 by Molmil
Cryo-EM structure of the Human SHMT1-RNA complex
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, cytosolic
Authors:Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
Deposit date:2022-05-30
Release date:2023-06-14
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 2024
8R7H
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BU of 8r7h by Molmil
Cryo-EM structure of Human SHMT1
Descriptor: Serine hydroxymethyltransferase, cytosolic
Authors:Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
Deposit date:2023-11-24
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 84, 2024
2VXX
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BU of 2vxx by Molmil
X-ray structure of DpsA from Thermosynechococcus elongatus
Descriptor: DI(HYDROXYETHYL)ETHER, FE (III) ION, STARVATION INDUCED DNA BINDING PROTEIN, ...
Authors:Franceschini, S, Ilari, A.
Deposit date:2008-07-14
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Thermosynechococcus Elongatus Dpsa Binds Zn(II) at a Unique Three Histidine-Containing Ferroxidase Center and Utilizes O2 as Iron Oxidant with Very High Efficiency, Unlike the Typical Dps Proteins.
FEBS J., 277, 2010
4B68
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BU of 4b68 by Molmil
A. fumigatus ornithine hydroxylase (SidA), re-oxidised state bound to NADP and Arg
Descriptor: ARGININE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
4B67
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BU of 4b67 by Molmil
A. fumigatus ornithine hydroxylase (SidA), re-oxidised state bound to NADP and ornithine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ORNITHINE N5 MONOOXYGENASE, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
4B64
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BU of 4b64 by Molmil
A. fumigatus ornithine hydroxylase (SidA) bound to NADP and Lysine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ORNITHINE N5 MONOOXYGENASE, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
4AP3
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BU of 4ap3 by Molmil
Oxidized steroid monooxygenase bound to NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, STEROID MONOOXYGENASE, ...
Authors:Franceschini, S, van Beek, H.L, Martinoli, C, Pennetta, A, Fraaije, M.W, Mattevi, A.
Deposit date:2012-03-30
Release date:2012-05-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Exploring the Structural Basis of Substrate Preferences in Baeyer-Villiger Monooxygenases: Insight from Steroid Monooxygenase.
J.Biol.Chem., 287, 2012
4B63
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BU of 4b63 by Molmil
A. fumigatus ornithine hydroxylase (SidA) bound to NADP and ornithine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ORNITHINE N5 MONOOXYGENASE, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
4AOS
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BU of 4aos by Molmil
Oxidized steroid monooxygenase bound to NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, STEROID MONOOXYGENASE, ...
Authors:Franceschini, S, van Beek, H.L, Martinoli, C, Fraaije, M.W, Mattevi, A.
Deposit date:2012-03-29
Release date:2012-05-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Exploring the Structural Basis of Substrate Preferences in Baeyer-Villiger Monooxygenases: Insight from Steroid Monooxygenase.
J.Biol.Chem., 287, 2012
4AP1
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BU of 4ap1 by Molmil
Oxidized steroid monooxygenase bound to NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, STEROID MONOOXYGENASE, ...
Authors:Franceschini, S, van Beek, H.L, Martinoli, C, Pennetta, A, Fraaije, M.W, Mattevi, A.
Deposit date:2012-03-30
Release date:2012-05-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Exploring the Structural Basis of Substrate Preferences in Baeyer-Villiger Monooxygenases: Insight from Steroid Monooxygenase.
J.Biol.Chem., 287, 2012
4AOX
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BU of 4aox by Molmil
Oxidized steroid monooxygenase bound to NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, STEROID MONOOXYGENASE, SULFATE ION
Authors:Franceschini, S, van Beek, H.L, Martinoli, C, Fraaije, M.W, Mattevi, A.
Deposit date:2012-03-30
Release date:2012-05-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Exploring the Structural Basis of Substrate Preferences in Baeyer-Villiger Monooxygenases: Insight from Steroid Monooxygenase.
J.Biol.Chem., 287, 2012
4B65
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BU of 4b65 by Molmil
A. fumigatus ornithine hydroxylase (SidA), reduced state bound to NADP(H)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ORNITHINE N5 MONOOXYGENASE, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
4B66
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BU of 4b66 by Molmil
A. fumigatus ornithine hydroxylase (SidA), reduced state bound to NADP and Arg
Descriptor: ARGININE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
4B69
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BU of 4b69 by Molmil
A. fumigatus ornithine hydroxylase (SidA) bound to ornithine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ORNITHINE N5 MONOOXYGENASE, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
2JC2
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BU of 2jc2 by Molmil
The crystal structure of the natural F112L human sorcin mutant
Descriptor: SORCIN, SULFATE ION
Authors:Franceschini, S, Ilari, A, Colotti, G, Chiancone, E.
Deposit date:2006-12-19
Release date:2007-08-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Basis for the Impaired Function of the Natural F112L Sorcin Mutant: X-Ray Crystal Structure, Calcium Affinity, and Interaction with Annexin Vii and the Ryanodine Receptor.
Faseb J., 22, 2008
1KCF
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BU of 1kcf by Molmil
Crystal Structure of the Yeast Mitochondrial Holliday Junction Resolvase, Ydc2
Descriptor: HYPOTHETICAL 30.2 KD PROTEIN C25G10.02 IN CHROMOSOME I, SULFATE ION
Authors:Ceschini, S, Keeley, A, McAlister, M.S.B, Oram, M, Phelan, J, Pearl, L.H, Tsaneva, I.R, Barrett, T.E.
Deposit date:2001-11-08
Release date:2001-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the fission yeast mitochondrial Holliday junction resolvase Ydc2.
EMBO J., 20, 2001
6XKR
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BU of 6xkr by Molmil
Structure of Sasanlimab Fab in complex with PD-1
Descriptor: GLYCEROL, Programmed cell death protein 1, Sasanlimab Fab Heavy chain, ...
Authors:Kimberlin, C.R, Chin, S.M.
Deposit date:2020-06-27
Release date:2020-09-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Pharmacologic Properties and Preclinical Activity of Sasanlimab, A High-affinity Engineered Anti-Human PD-1 Antibody.
Mol.Cancer Ther., 19, 2020
3TTG
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BU of 3ttg by Molmil
Crystal structure of putative aminomethyltransferase from Leptospirillum rubarum
Descriptor: CHLORIDE ION, Putative aminomethyltransferase
Authors:Michalska, K, Xu, X, Cui, H, Chin, S, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-09-14
Release date:2011-10-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of putative aminomethyltransferase from Leptospirillum rubarum
TO BE PUBLISHED
3M92
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BU of 3m92 by Molmil
The structure of yciN, an unchracterized protein from Shigella flexneri.
Descriptor: CHLORIDE ION, Protein yciN, SODIUM ION
Authors:Cuff, M.E, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-03-19
Release date:2010-05-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of yciN, an unchracterized protein from Shigella flexneri.
TO BE PUBLISHED
3MFN
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BU of 3mfn by Molmil
Dfer_2879 protein of unknown function from Dyadobacter fermentans
Descriptor: ACETATE ION, Uncharacterized protein
Authors:Osipiuk, J, Xu, X, Cui, H, Chin, S, Eisen, J, Wu, D, Kerfeld, C, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-04-02
Release date:2010-04-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:X-ray crystal structure of Dfer_2879 protein of unknown function from Dyadobacter fermentans.
To be Published
3MQZ
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BU of 3mqz by Molmil
Crystal Structure of Conserved Protein DUF1054 from Pink Subaerial Biofilm Microbial Leptospirillum sp. Group II UBA.
Descriptor: CHLORIDE ION, GLYCEROL, uncharacterized Conserved Protein DUF1054
Authors:Kim, Y, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-04-28
Release date:2010-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of Conserved Protein DUF1054 from Pink Subaerial Biofilm Microbial Leptospirillum sp. Group II UBA.
To be Published
3OMB
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BU of 3omb by Molmil
Crystal structure of extracellular solute-binding protein from Bifidobacterium longum subsp. infantis
Descriptor: Extracellular solute-binding protein, family 1, MAGNESIUM ION
Authors:Chang, C, Xu, X, Chin, S, Cui, H, Dong, A, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-26
Release date:2010-09-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of extracellular solute-binding protein from Bifidobacterium longum subsp. infantis
To be Published
3QUF
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BU of 3quf by Molmil
The structure of a family 1 extracellular solute-binding protein from Bifidobacterium longum subsp. infantis
Descriptor: ACETIC ACID, Extracellular solute-binding protein, family 1, ...
Authors:Cuff, M.E, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-02-23
Release date:2011-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of a family 1 extracellular solute-binding protein from Bifidobacterium longum subsp. infantis
TO BE PUBLISHED
3MVP
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BU of 3mvp by Molmil
The Crystal Structure of a TetR/AcrR transcriptional regulator from Streptococcus mutans to 1.85A
Descriptor: TetR/AcrR transcriptional regulator
Authors:Stein, A.J, Xu, X, Cui, H, Chin, S, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-05-04
Release date:2010-05-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of a TetR/AcrR transcriptional regulator from Streptococcus mutans to 1.85A
To be Published
3NA2
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BU of 3na2 by Molmil
Crystal Structure of Protein of Unknown Function from Mine Drainage Metagenome Leptospirillum rubarum
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, Uncharacterized protein
Authors:Kim, Y, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-05-31
Release date:2010-07-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Crsystal Structure of Protein of Unknown Function from Mine Drainage Metagenome Leptospirillum rubarum
To be Published

 

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