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PDB: 772 results

6DXC
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Crystal structure of chalcone synthase from Selaginella moellendorffii - S340C mutant
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018
5YQS
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BU of 5yqs by Molmil
Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yaoi, K, Matsuzawa, T, Watanabe, M, Nakamichi, Y.
Deposit date:2017-11-07
Release date:2018-11-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme.
J.Struct.Biol., 205, 2019
5KJS
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BU of 5kjs by Molmil
Crystal Structure of Arabidopsis thaliana HCT
Descriptor: Shikimate O-hydroxycinnamoyltransferase
Authors:Levsh, O, Chiang, Y.C, Tung, C, Noel, J.P, Wang, Y, Weng, J.K.
Deposit date:2016-06-20
Release date:2016-11-02
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
Biochemistry, 55, 2016
5KJV
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Crystal structure of Coleus blumei HCT
Descriptor: Hydroxycinnamoyl transferase
Authors:Levsh, O, Chiang, Y.C, Tung, C.F, Noel, J.P, Wang, Y, Weng, J.K.
Deposit date:2016-06-20
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
Biochemistry, 55, 2016
5WYR
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BU of 5wyr by Molmil
Crystal structure and catalytic mechanism of the essential m1G37 tRNA methyltransferase TrmD from Pseudomonas aeruginosa
Descriptor: SINEFUNGIN, tRNA (guanine-N(1)-)-methyltransferase
Authors:Jaroensuk, J, Liew, C.W, Atichartpongkul, S, Chionh, Y.H, Wong, Y.H, Zhong, W.H, McBee, M.E, Thongdee, N, Prestwich, E.G, DeMott, M.S, Mongkolsuk, S, Dedon, P.C, Lescar, J, Fuangthong, M.
Deposit date:2017-01-15
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure and catalytic mechanism of the essential m1G37 tRNA methyltransferase TrmD fromPseudomonas aeruginosa.
Rna, 2019
5X1D
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BU of 5x1d by Molmil
Crystal Structure of T246A-N247A Human CRMP-2 Mutant
Descriptor: Dihydropyrimidinase-related protein 2
Authors:Nitta, R, Tomabechi, Y, Aoki, M, Shirouzu, M.
Deposit date:2017-01-25
Release date:2017-09-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for CRMP2-induced axonal microtubule formation
Sci Rep, 7, 2017
5KJW
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BU of 5kjw by Molmil
Crystal structure of Coleus blumei HCT in complex with 3-hydroxyacetophenone
Descriptor: 1-(3-hydroxyphenyl)ethanone, Hydroxycinnamoyl transferase
Authors:Levsh, O, Chiang, Y.C, Tung, C.F, Noel, J.P, Wang, Y, Weng, J.K.
Deposit date:2016-06-20
Release date:2016-11-02
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
Biochemistry, 55, 2016
1WUZ
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BU of 1wuz by Molmil
Structure of EC1 domain of CNR
Descriptor: Pcdha4 protein
Authors:Morishita, H, Umitsu, M, Yamaguchi, T, Murata, Y, Shibata, N, Udaka, K, Higuchi, Y, Akutsu, H, Yagi, T, Ikegami, T.
Deposit date:2004-12-09
Release date:2005-12-13
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural diversity of the first cadherin domains revealed by the structure of CNR/Protocadherin alpha
To be Published
1WSP
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BU of 1wsp by Molmil
Crystal structure of axin dix domain
Descriptor: Axin 1 protein, BENZOIC ACID, MERCURY (II) ION
Authors:Shibata, N, Hanamura, T, Yamamoto, R, Ueda, Y, Yamamoto, H, Kikuchi, A, Higuchi, Y.
Deposit date:2004-11-08
Release date:2006-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of axin dix domain
to be published
5KJU
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BU of 5kju by Molmil
Crystal structure of Arabidopsis thaliana HCT in complex with p-coumaroylshikimate
Descriptor: (3~{R},4~{S},5~{R})-3-[(~{E})-3-(4-hydroxyphenyl)prop-2-enoyl]oxy-4,5-bis(oxidanyl)cyclohexene-1-carboxylic acid, Shikimate O-hydroxycinnamoyltransferase
Authors:Levsh, O, Chiang, Y.C, Tung, C.F, Noel, J.P, Wang, Y, Weng, J.K.
Deposit date:2016-06-20
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
Biochemistry, 55, 2016
5WYF
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Structure of amino acid racemase, 2.12 A
Descriptor: CADMIUM ION, Isoleucine 2-epimerase, N-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE
Authors:Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
Deposit date:2017-01-12
Release date:2017-04-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
5X1A
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BU of 5x1a by Molmil
Crystal Structure of Human CRMP-2
Descriptor: Dihydropyrimidinase-related protein 2
Authors:Nitta, R, Tomabechi, Y, Aoki, M, Shirouzu, M.
Deposit date:2017-01-25
Release date:2017-09-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.821 Å)
Cite:Structural basis for CRMP2-induced axonal microtubule formation
Sci Rep, 7, 2017
6DXA
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BU of 6dxa by Molmil
Crystal structure of chalcone synthase from Pinus sylvestris
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018
5X1C
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BU of 5x1c by Molmil
Crystal Structure of Human CRMP-2 without C-terminal Tail
Descriptor: Dihydropyrimidinase-related protein 2
Authors:Nitta, R, Tomabechi, Y, Aoki, M, Shirouzu, M.
Deposit date:2017-01-25
Release date:2017-09-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structural basis for CRMP2-induced axonal microtubule formation
Sci Rep, 7, 2017
5XED
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BU of 5xed by Molmil
Heterodimer constructed from M61A PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
Descriptor: Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C
Authors:Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S.
Deposit date:2017-04-04
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins.
Chembiochem, 18, 2017
6DXD
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BU of 6dxd by Molmil
Crystal structure of chalcone synthase from Arabidopsis thaliana - C347S mutant
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018
6DXE
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BU of 6dxe by Molmil
Crystal structure of chalcone synthase from Arabidopsis thaliana - M64I F170S G173A S213G Q217A T270V C347S mutant
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.608 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018
6DX8
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BU of 6dx8 by Molmil
Crystal structure of chalcone synthase from Selaginella moellendorffii
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018
6DXB
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BU of 6dxb by Molmil
Crystal structure of chalcone synthase from Arabidopsis thaliana
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018
5ZAB
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BU of 5zab by Molmil
Crystal structure of cf3-aequorin
Descriptor: (2S)-8-benzyl-2-hydroperoxy-6-(4-hydroxyphenyl)-2-{[4-(trifluoromethyl)phenyl]methyl}imidazo[1,2-a]pyrazin-3(2H)-one, Aequorin-2
Authors:Inouye, S, Tomabechi, Y, Sekine, S.I, Shirouzu, M, Hosoya, T.
Deposit date:2018-02-07
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Slow luminescence kinetics of semi-synthetic aequorin: expression, purification and structure determination of cf3-aequorin.
J. Biochem., 164, 2018
6L1V
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BU of 6l1v by Molmil
Domain-swapped Alcaligenes xylosoxidans azurin dimer
Descriptor: Azurin-1, COPPER (II) ION
Authors:Cahyono, R.N, Yamanaka, M, Nagao, S, Shibata, N, Higuchi, Y, Hirota, S.
Deposit date:2019-09-30
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:3D domain swapping of azurin from Alcaligenes xylosoxidans.
Metallomics, 12, 2020
5ZN6
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BU of 5zn6 by Molmil
Crystal structure of GH31 alpha-xylosidase from a soil metagenome
Descriptor: Alpha-xylosidase MeXyl31, GLYCEROL
Authors:Matsuzawa, T, Nakamichi, Y, Watanabe, M, Yaoi, K.
Deposit date:2018-04-07
Release date:2019-04-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into substrate specificity of alpha-xylosidase from a soil metagenome
To Be Published
5Z25
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BU of 5z25 by Molmil
Trimeric Alpha-Helix-Inserted Circular Permutant of Cytochrome c555
Descriptor: Cytochrome c552, HEME C, TETRAETHYLENE GLYCOL
Authors:Oda, A, Nagao, S, Yamanaka, M, Ueda, I, Shibata, N, Higuchi, Y, Hirota, S.
Deposit date:2017-12-28
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Construction of a Triangle-Shaped Trimer and a Tetrahedron Using an alpha-Helix-Inserted Circular Permutant of Cytochrome c555.
Chem Asian J, 13, 2018
5KJT
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BU of 5kjt by Molmil
Crystal structure of Arabidopsis thaliana HCT in complex with p-coumaroyl-CoA
Descriptor: Shikimate O-hydroxycinnamoyltransferase, p-coumaroyl-CoA
Authors:Levsh, O, Chiang, Y.C, Tung, C.F, Noel, J.P, Wang, Y, Weng, J.K.
Deposit date:2016-06-20
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
Biochemistry, 55, 2016
6DXF
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BU of 6dxf by Molmil
Crystal structure of chalcone synthase from Selaginella moellendorffii - hydrogen peroxide treated
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018

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