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PDB: 772 件
3WVY
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BU of 3wvy by Molmil
Structure of D48A hen egg white lysozyme in complex with (GlcNAc)4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme C
著者Kawaguchi, Y, Yoneda, K, Araki, T.
登録日2014-06-11
公開日2015-06-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献The role of Asp48 in the hydrogen bonding network involving Asp52 of hen egg white lysozyme
TO BE PUBLISHED
3WYH
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BU of 3wyh by Molmil
Structure of disulfide bond deletion mutant of ostrich egg white lysozyme
分子名称: HEXAETHYLENE GLYCOL, Lysozyme g, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Kawaguchi, Y, Yoneda, K, Araki, T.
登録日2014-08-28
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structure of disulfide bond deletion mutant of ostrich egg white lysozyme
To be Published
7F2V
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BU of 7f2v by Molmil
Urate oxidase from Thermobispora bispora in apo form
分子名称: DIMETHYL SULFOXIDE, SULFATE ION, Uricase
著者Chiu, Y.C, Hsu, T.S, Huang, C.Y, Hsu, C.H.
登録日2021-06-14
公開日2022-05-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and biochemical insights into a hyperthermostable urate oxidase from Thermobispora bispora for hyperuricemia and gout therapy.
Int.J.Biol.Macromol., 188, 2021
2YXW
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BU of 2yxw by Molmil
The deletion mutant of Multicopper Oxidase CueO
分子名称: Blue copper oxidase cueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Higuchi, Y, Komori, H.
登録日2007-04-27
公開日2008-01-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site
J.Mol.Biol., 373, 2007
2ZJD
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BU of 2zjd by Molmil
Crystal Structure of LC3-p62 complex
分子名称: Microtubule-associated proteins 1A/1B light chain 3B precursor, undecameric peptide from Sequestosome-1
著者Ichimura, Y, Kumanomidou, T, Sou, Y, Mizushima, T, Ezaki, J, Ueno, T, Kominami, E, Yamane, T, Tanaka, K, Komatsu, M.
登録日2008-03-05
公開日2008-06-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural Basis for Sorting Mechanism of p62 in Selective Autophagy
J.Biol.Chem., 283, 2008
2YXV
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BU of 2yxv by Molmil
The deletion mutant of Multicopper Oxidase CueO
分子名称: Blue copper oxidase cueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Higuchi, Y, Komori, H.
登録日2007-04-27
公開日2008-01-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site
J.Mol.Biol., 373, 2007
2YZ3
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BU of 2yz3 by Molmil
Crystallographic Investigation of Inhibition Mode of the VIM-2 Metallo-beta-lactamase from Pseudomonas aeruginosa with Mercaptocarboxylate Inhibitor
分子名称: (S)-2-(MERCAPTOMETHYL)-5-PHENYLPENTANOIC ACID, Metallo-beta-lactamase, SULFATE ION, ...
著者Yamaguchi, Y, Yamagata, Y, Arakawa, Y, Kurosaki, H.
登録日2007-05-02
公開日2008-03-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic investigation of the inhibition mode of a VIM-2 metallo-beta-lactamase from Pseudomonas aeruginosa by a mercaptocarboxylate inhibitor.
J.Med.Chem., 50, 2007
3ANI
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BU of 3ani by Molmil
Crystal structure of unsaturated glucuronyl hydrolase mutant D175N from Streptcoccus agalactiae
分子名称: Putative uncharacterized protein gbs1889
著者Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
登録日2010-09-02
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
3ANK
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BU of 3ank by Molmil
Crystal structure of unsaturated glucuronyl hydrolase mutant D175N from Streptcoccus agalactiae complexed with dGlcA-GalNAc6S
分子名称: 1,2-ETHANEDIOL, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose, Putative uncharacterized protein gbs1889
著者Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
登録日2010-09-02
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
3ANJ
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BU of 3anj by Molmil
Crystal structure of unsaturated glucuronyl hydrolase from Streptcoccus agalactiae
分子名称: Putative uncharacterized protein gbs1889
著者Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
登録日2010-09-02
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
7JPM
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BU of 7jpm by Molmil
The solution structure of omega-theraphotoxin-Pm1b isolated from King Baboon spider
分子名称: Omega-theraphotoxin-Pm1b
著者Chin, Y.K.-Y, Ziegman, R, Alewood, P.F.
登録日2020-08-09
公開日2021-09-08
最終更新日2023-10-11
実験手法SOLUTION NMR
主引用文献Multitarget nociceptor sensitization by a promiscuous peptide from the venom of the King Baboon spider.
Proc.Natl.Acad.Sci.USA, 119, 2022
2ZWP
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BU of 2zwp by Molmil
Crystal structure of Ca3 site mutant of Pro-S324A
分子名称: CALCIUM ION, Tk-subtilisin
著者Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2008-12-17
公開日2009-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Requirement of a unique Ca(2+)-binding loop for folding of Tk-subtilisin from a hyperthermophilic archaeon.
Biochemistry, 48, 2009
2ZWO
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BU of 2zwo by Molmil
Crystal structure of Ca2 site mutant of Pro-S324A
分子名称: CALCIUM ION, Tk-subtilisin
著者Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2008-12-17
公開日2009-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Requirement of a unique Ca(2+)-binding loop for folding of Tk-subtilisin from a hyperthermophilic archaeon.
Biochemistry, 48, 2009
2YYW
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BU of 2yyw by Molmil
The F20M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-05-02
公開日2008-05-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2YYX
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BU of 2yyx by Molmil
The Y65A mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-05-02
公開日2008-05-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
3AQO
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BU of 3aqo by Molmil
Structure and function of a membrane component SecDF that enhances protein export
分子名称: Probable SecDF protein-export membrane protein
著者Echizen, Y, Tsukazaki, T, Ishitani, R, Nureki, O.
登録日2010-11-16
公開日2011-05-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of a membrane component SecDF that enhances protein export.
Nature, 474, 2011
2YXC
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BU of 2yxc by Molmil
The H25M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-04-26
公開日2008-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.
Biochemistry, 47, 2008
2Z47
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BU of 2z47 by Molmil
The Y66L mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, HEME C
著者Higuchi, Y, Komori, H.
登録日2007-06-13
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2ZJW
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BU of 2zjw by Molmil
Crystal structure of human CK2 alpha complexed with Ellagic acid
分子名称: 2,3,7,8-tetrahydroxychromeno[5,4,3-cde]chromene-5,10-dione, Casein kinase II subunit alpha
著者Sekiguchi, Y, Kinoshita, T, Nakaniwa, T, Tada, T.
登録日2008-03-11
公開日2009-03-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insight into human CK2alpha in complex with the potent inhibitor ellagic acid
Bioorg.Med.Chem.Lett., 19, 2009
3AMY
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BU of 3amy by Molmil
Crystal structure of human CK2 alpha complexed with apigenin
分子名称: 1,2-ETHANEDIOL, 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, Casein kinase II subunit alpha
著者Sekiguchi, Y, Nakaniwa, T, Kinoshita, T, Tada, T.
登録日2010-08-25
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human CK2 alpha complexed with apigenin
To be Published
1BCC
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BU of 1bcc by Molmil
CYTOCHROME BC1 COMPLEX FROM CHICKEN
分子名称: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Zhang, Z, Huang, L, Shulmeister, V.M, Chi, Y.-I, Kim, K.K, Hung, L.-W, Crofts, A.R, Berry, E.A, Kim, S.-H.
登録日1998-03-23
公開日1998-08-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Electron transfer by domain movement in cytochrome bc1.
Nature, 392, 1998
3CBB
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BU of 3cbb by Molmil
Crystal Structure of Hepatocyte Nuclear Factor 4alpha in complex with DNA: Diabetes Gene Product
分子名称: Hepatocyte Nuclear Factor 4-alpha promoter element DNA, Hepatocyte Nuclear Factor 4-alpha, DNA binding domain, ...
著者Lu, P, Rha, G.B, Melikishvili, M, Adkins, B.C, Fried, M.G, Chi, Y.I.
登録日2008-02-21
公開日2008-10-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of natural promoter recognition by a unique nuclear receptor, HNF4alpha. Diabetes gene product.
J.Biol.Chem., 283, 2008
3DRE
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BU of 3dre by Molmil
Crystal structure of Human Brain-type Creatine Kinase
分子名称: Creatine kinase B-type
著者Moon, J.H, Bong, S.M, Hwang, K.Y, Chi, Y.M.
登録日2008-07-11
公開日2009-03-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural studies of human brain-type creatine kinase complexed with the ADP-Mg2+-NO3- -creatine transition-state analogue complex
Febs Lett., 582, 2008
3DRB
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BU of 3drb by Molmil
Crystal structure of Human Brain-type Creatine Kinase
分子名称: ADENOSINE-5'-DIPHOSPHATE, Creatine kinase B-type, MAGNESIUM ION
著者Moon, J.H, Bong, S.M, Hwang, K.Y, Chi, Y.M.
登録日2008-07-11
公開日2009-03-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural studies of human brain-type creatine kinase complexed with the ADP-Mg2+-NO3- -creatine transition-state analogue complex
Febs Lett., 582, 2008
3J6P
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BU of 3j6p by Molmil
Pseudo-atomic model of dynein microtubule binding domain-tubulin complex based on a cryoEM map
分子名称: Dynein heavy chain, cytoplasmic, GUANOSINE-5'-DIPHOSPHATE, ...
著者Uchimura, S, Fujii, T, Takazaki, H, Ayukawa, R, Nishikawa, Y, Minoura, I, Hachikubo, Y, Kurisu, G, Sutoh, K, Kon, T, Namba, K, Muto, E.
登録日2014-03-20
公開日2014-12-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献A flipped ion pair at the dynein-microtubule interface is critical for dynein motility and ATPase activation
J.Cell Biol., 208, 2015

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