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PDB: 913 件

5V4L
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Cryptococcus neoformans adenylosuccinate lyase
分子名称: Adenylosuccinate lyase
著者Chitty, J, Williams, S.J, Kobe, B, Fraser, J.A.
登録日2017-03-09
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Cryptococcus neoformans ADS lyase is an enzyme essential for virulence whose crystal structure reveals features exploitable in antifungal drug design.
J. Biol. Chem., 292, 2017
7O2Z
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BU of 7o2z by Molmil
Crystal structure of the anti-PAS Fab 2.2 in complex with its epitope peptide
分子名称: CHLORIDE ION, P/A#1 epitope peptide, anti-PAS Fab 2.2 chimeric heavy chain, ...
著者Schilz, J, Schiefner, A, Skerra, A.
登録日2021-04-01
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Molecular recognition of structurally disordered Pro/Ala-rich sequences (PAS) by antibodies involves an Ala residue at the hot spot of the epitope.
J.Mol.Biol., 433, 2021
8I52
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BU of 8i52 by Molmil
Crystal structure of VIM-2 metallo-beta-lactamase in complex with 10-HHIA
分子名称: (2~{S})-2-butyl-3-methylidene-butanedioic acid, Beta-lactamase class B VIM-2, FORMIC ACID, ...
著者Wachino, J.
登録日2023-01-23
公開日2024-01-10
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of VIM-2 Metallo-beta-lactamase in complex with 10-HHIA
To Be Published
4LOX
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BU of 4lox by Molmil
Crystal structure of the I-SmaMI LAGLIDADG homing endonuclease bound to cleaved DNA
分子名称: DNA (5'-D(*CP*GP*TP*AP*CP*AP*CP*CP*TP*GP*AP*TP*AP*A)-3'), DNA (5'-D(*GP*GP*TP*AP*TP*CP*CP*TP*CP*CP*AP*TP*TP*AP*T)-3'), DNA (5'-D(P*CP*AP*GP*GP*TP*GP*TP*AP*CP*G)-3'), ...
著者Chik, J, Shen, B, Stoddard, B.
登録日2013-07-14
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structure of a LAGLIDADG endonuclease from the Sordaria Macrospore.
To be Published
4LQ0
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Crystal structure of the I-LtrWI LAGLIDADG homing endonuclease bound to target DNA.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Chik, J, Shen, B, Stoddard, B.
登録日2013-07-16
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural Comparisons of LAGLIDADG Homing Endonucleases.
To be Published
1IUF
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BU of 1iuf by Molmil
LOW RESOLUTION SOLUTION STRUCTURE OF THE TWO DNA-BINDING DOMAINS IN Schizosaccharomyces pombe ABP1 PROTEIN
分子名称: centromere abp1 protein
著者Kikuchi, J, Iwahara, J, Kigawa, T, Murakami, Y, Okazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-04
公開日2002-06-05
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure determination of the two DNA-binding domains in the Schizosaccharomyces pombe Abp1 protein by a combination of dipolar coupling and diffusion anisotropy restraints.
J.Biomol.NMR, 22, 2002
5AXO
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BU of 5axo by Molmil
Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to Hydrolyzed Meropenem
分子名称: (2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-(dimethylcarbamoy l)pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Metallo-beta-lactamase, ...
著者Wachino, J, Arakawa, Y.
登録日2015-07-31
公開日2016-05-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to Hydrolyzed Meropenem
To Be Published
5V33
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R. sphaeroides photosythetic reaction center mutant - Residue L223, Ser to Trp - Room Temperature Structure Solved on X-ray Transparent Microfluidic Chip
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Schieferstein, J.M, Pawate, A.S, Sun, C, Wan, F, Broecker, J, Ernst, O.P, Gennis, R.B, Kenis, P.J.A.
登録日2017-03-06
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.487 Å)
主引用文献X-ray transparent microfluidic chips for high-throughput screening and optimization of in meso membrane protein crystallization.
Biomicrofluidics, 11, 2017
5AYA
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BU of 5aya by Molmil
Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to L-captopril
分子名称: L-CAPTOPRIL, Metallo-beta-lactamase, SODIUM ION, ...
著者Wachino, J, Arakawa, Y.
登録日2015-08-12
公開日2016-05-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal Structure of Metallo-beta-Lactamase SMB-1 Bound to L-captopril
To Be Published
5LWS
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Endothiapepsin in complex with fragment 177 and a derivative thereof
分子名称: 4-[12-[(1-chloranyl-5,6,7-trimethyl-pyrrolo[3,4-d]pyridazin-3-ium-3-yl)methyl]-10,11-dimethyl-3,4,6,7,11-pentazatricyclo[7.3.0.0^{2,6}]dodeca-1(12),2,4,7,9-pentaen-5-yl]-1,2,5-trimethyl-pyrrole-3-carbaldehyde, 4-chloranyl-5,6,7-trimethyl-pyrrolo[3,4-d]pyridazine, ACETATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-09-19
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献A False-Positive Screening Hit in Fragment-Based Lead Discovery: Watch out for the Red Herring.
Angew. Chem. Int. Ed. Engl., 56, 2017
7AWT
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BU of 7awt by Molmil
E. coli NADH quinone oxidoreductase hydrophilic arm
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Schimpf, J, Grishkovskaya, I, Haselbach, D, Friedrich, T.
登録日2020-11-09
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Structure of the peripheral arm of a minimalistic respiratory complex I.
Structure, 30, 2022
5LWU
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Structure resulting from an endothiapepsin crystal soaked with a dimeric derivative of fragment 177
分子名称: ACETATE ION, DIMETHYL SULFOXIDE, Endothiapepsin, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-09-19
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.109 Å)
主引用文献A False-Positive Screening Hit in Fragment-Based Lead Discovery: Watch out for the Red Herring.
Angew. Chem. Int. Ed. Engl., 56, 2017
5LWT
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BU of 5lwt by Molmil
Endothiapepsin in complex with a methoxylated derivative of fragment 177
分子名称: 4-methoxy-5,6,7-trimethyl-pyrrolo[3,4-d]pyridazine, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-09-19
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.069 Å)
主引用文献A False-Positive Screening Hit in Fragment-Based Lead Discovery: Watch out for the Red Herring.
Angew. Chem. Int. Ed. Engl., 56, 2017
3JB5
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BU of 3jb5 by Molmil
Capsid Structure of the Propionibacterium acnes Bacteriophage ATCC_Clear
分子名称: major capsid protein
著者Chiou, J, Zhang, X, Marinelli, L.J, Modlin, R.L, Zhou, Z.H.
登録日2015-07-23
公開日2016-07-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Capsid Structure of the Propionibacterium acnes Bacteriophage ATCC_Clear
To be Published
3TM1
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BU of 3tm1 by Molmil
Crystal structure of mature ThnT, a pantetheine hydrolase
分子名称: GLYCEROL, cysteine transferase
著者Schildbach, J.F, Wright, N.T, Buller, A.R.
登録日2011-08-30
公開日2012-07-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Autoproteolytic Activation of ThnT Results in Structural Reorganization Necessary for Substrate Binding and Catalysis.
J.Mol.Biol., 422, 2012
1N6U
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BU of 1n6u by Molmil
NMR structure of the interferon-binding ectodomain of the human interferon receptor
分子名称: Interferon-alpha/beta receptor beta chain
著者Chill, J.H, Quadt, S.R, Levy, R, Schreiber, G, Anglister, J.
登録日2002-11-12
公開日2003-07-15
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The human type I interferon receptor. NMR structure reveals the molecular basis of ligand binding.
Structure, 11, 2003
7B0M
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BU of 7b0m by Molmil
Sugar transaminase from a metagenome collected from troll oil field production water
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Sugar aminotransferase, ...
著者Littlechild, J.A, De Rose, S.A, Isupov, M.N, Sayer, C, Karki, S.
登録日2020-11-20
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Sugar transaminases from hot environments
To Be Published
5MNQ
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BU of 5mnq by Molmil
Cationic trypsin in complex with a derivative of N-amidinopiperidine
分子名称: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(1-carbamimidoylpiperidin-4-yl)methyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Ngo, K, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.337 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
3TM2
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BU of 3tm2 by Molmil
Crystal structure of mature ThnT with a covalently bound product mimic
分子名称: (2R)-N-(4-chloro-3-oxobutyl)-2,4-dihydroxy-3,3-dimethylbutanamide, cysteine transferase
著者Schildbach, J.F, Wright, N.T, Buller, A.R.
登録日2011-08-30
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Autoproteolytic Activation of ThnT Results in Structural Reorganization Necessary for Substrate Binding and Catalysis.
J.Mol.Biol., 422, 2012
6GNI
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BU of 6gni by Molmil
Cryo-tomography and subtomogram averaging of Sar1-Sec23-Sec24 - fitted model.
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Protein transport protein SEC23, ...
著者Hutchings, J, Zanetti, G.
登録日2018-05-30
公開日2018-10-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Subtomogram averaging of COPII assemblies reveals how coat organization dictates membrane shape.
Nat Commun, 9, 2018
1N6V
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BU of 1n6v by Molmil
Average structure of the interferon-binding ectodomain of the human type I interferon receptor
分子名称: Interferon-alpha/beta receptor beta chain
著者Chill, J.H, Quadt, S.R, Levy, R, Schreiber, G, Anglister, J.
登録日2002-11-12
公開日2003-07-15
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The human type I interferon receptor. NMR structure reveals the molecular basis of ligand binding.
Structure, 11, 2003
6A6P
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BU of 6a6p by Molmil
Crystal Structure of Peroxisome Proliferator-Activated Receptor Delta (PPARd)LBD in Complex with DN003316
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Peroxisome proliferator-activated receptor delta, heptyl beta-D-glucopyranoside, ...
著者Chin, J.W, Cho, S.J, Song, J.Y, Ha, J.H.
登録日2018-06-29
公開日2019-07-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Peroxisome Proliferator-Activated Receptor Delta (PPARd)LBD in Complex with DN003316
To Be Published
1AW0
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BU of 1aw0 by Molmil
FOURTH METAL-BINDING DOMAIN OF THE MENKES COPPER-TRANSPORTING ATPASE, NMR, 20 STRUCTURES
分子名称: MENKES COPPER-TRANSPORTING ATPASE
著者Gitschier, J, Fairbrother, W.J.
登録日1997-10-08
公開日1998-01-28
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Solution structure of the fourth metal-binding domain from the Menkes copper-transporting ATPase.
Nat.Struct.Biol., 5, 1998
5DR3
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BU of 5dr3 by Molmil
Endothiapepsin in complex with fragment 333
分子名称: 1,2-ETHANEDIOL, 4-propan-2-ylsulfanyl-1-propyl-6,7-dihydro-5~{H}-cyclopenta[d]pyrimidin-2-one, ACETATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2015-09-15
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
7O33
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Crystal structure of the anti-PAS Fab 3.1 in complex with its epitope peptide
分子名称: APSA epitope peptide, anti-PAS Fab 3.1 chimeric heavy chain, anti-PAS Fab 3.1 chimeric light chain
著者Schilz, J, Skerra, A.
登録日2021-04-01
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular recognition of structurally disordered Pro/Ala-rich sequences (PAS) by antibodies involves an Ala residue at the hot spot of the epitope.
J.Mol.Biol., 433, 2021

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件を2024-07-31に公開中

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