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PDB: 592 件

2Z59
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BU of 2z59 by Molmil
Complex Structures of Mouse Rpn13 (22-130aa) and ubiquitin
分子名称: Protein ADRM1, Ubiquitin
著者Chen, X, Schreiner, P, Groll, M, Walters, K.J.
登録日2007-07-01
公開日2008-05-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction.
Nature, 453, 2008
6MUN
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BU of 6mun by Molmil
Structure of hRpn10 bound to UBQLN2 UBL
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquilin-2
著者Chen, X, Walters, K.J.
登録日2018-10-23
公開日2019-09-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of hRpn10 Bound to UBQLN2 UBL Illustrates Basis for Complementarity between Shuttle Factors and Substrates at the Proteasome.
J.Mol.Biol., 431, 2019
5IRS
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BU of 5irs by Molmil
crystal structure of the proteasomal Rpn13 PRU-domain
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Proteasomal ubiquitin receptor ADRM1
著者Chen, X, Shi, K, Walters, K, Aihara, H.
登録日2016-03-14
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
6OER
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BU of 6oer by Molmil
Cryo-EM structure of mouse RAG1/2 NFC complex (DNA2)
分子名称: CALCIUM ION, DNA (46-MER), DNA (57-MER), ...
著者Chen, X, Cui, Y, Zhou, Z.H, Yang, W, Gellert, M.
登録日2019-03-27
公開日2020-01-29
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Cutting antiparallel DNA strands in a single active site.
Nat.Struct.Mol.Biol., 27, 2020
2H6O
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BU of 2h6o by Molmil
Epstein Barr Virus Major Envelope Glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Major outer envelope glycoprotein gp350, ...
著者Chen, X.S.
登録日2006-05-31
公開日2006-10-31
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the Epstein-Barr virus major envelope glycoprotein
Nat.Struct.Mol.Biol., 13, 2006
8JAI
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BU of 8jai by Molmil
Crystal Structure of Human H-Ferritin variant 123F assembling in solution 1
分子名称: FE (III) ION, Ferritin heavy chain
著者Chen, X, Zhao, G.
登録日2023-05-06
公開日2024-01-31
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Shape-Anisotropic Assembly of Protein Nanocages with Identical Building Blocks by Designed Intermolecular pi-pi Interactions.
Adv Sci, 10, 2023
7F3M
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BU of 7f3m by Molmil
Crystal structure of FGFR4 kinase domain with PRN1371
分子名称: 6-[2,6-bis(chloranyl)-3,5-dimethoxy-phenyl]-2-(methylamino)-8-[3-(4-prop-2-enoylpiperazin-1-yl)propyl]pyrido[2,3-d]pyrimidin-7-one, Fibroblast growth factor receptor 4, SULFATE ION
著者Chen, X.J, Qu, L.Z, Dai, S.Y, Wei, H.D, Chen, Y.H.
登録日2021-06-16
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.289 Å)
主引用文献Structural insights into the potency and selectivity of covalent pan-FGFR inhibitors
Commun Chem, 5, 2022
6KUZ
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E.coli beta-galactosidase (E537Q) in complex with fluorescent probe KSL01
分子名称: 3-(1,3-benzothiazol-2-yl)-2-[[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]methoxy]-5-methyl-benzaldehyde, Beta-galactosidase, DIMETHYL SULFOXIDE, ...
著者Chen, X, Hu, Y.L, Li, X.K, Guo, Y, Li, J.
登録日2019-09-03
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献First-generation species-selective chemical probes for fluorescence imaging of human senescence-associated beta-galactosidase.
Chem Sci, 11, 2020
7X9E
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BU of 7x9e by Molmil
Crystal structure of the 76E1 Fab in complex with a SARS-CoV-2 spike peptide
分子名称: 76E1 Fab Heavy Chain, 76E1 Fab Light Chain, Spike peptide
著者Chen, X, Zhang, T, Ding, J, Sun, X, Sun, B.
登録日2022-03-15
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Neutralization mechanism of a human antibody with pan-coronavirus reactivity including SARS-CoV-2.
Nat Microbiol, 7, 2022
6IHG
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BU of 6ihg by Molmil
N terminal domain of Mycobacterium avium complex Lon protease
分子名称: Lon protease
著者Chen, X.Y, Zhang, S.J, Bi, F.K, Guo, C.Y, Yao, H.W, Lin, D.H.
登録日2018-09-29
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Crystal structure of the N domain of Lon protease from Mycobacterium avium complex.
Protein Sci., 28, 2019
2KQZ
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BU of 2kqz by Molmil
Solution structure of the Rpn13 DEUBAD domain
分子名称: Proteasomal ubiquitin receptor ADRM1
著者Chen, X, Lee, B, Finley, D, Walters, K.J.
登録日2009-11-25
公開日2010-05-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Proteasome Ubiquitin Receptor hRpn13 and Its Activation by the Scaffolding Protein hRpn2.
Mol.Cell, 38, 2010
2KR0
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BU of 2kr0 by Molmil
Solution structure of the proteasome ubiquitin receptor Rpn13
分子名称: Proteasomal ubiquitin receptor ADRM1
著者Chen, X, Lee, B, Finley, D, Walters, K.J.
登録日2009-11-25
公開日2010-05-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Proteasome Ubiquitin Receptor hRpn13 and Its Activation by the Scaffolding Protein hRpn2.
Mol.Cell, 38, 2010
7CK9
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BU of 7ck9 by Molmil
Crystal structure of Doxorubicin loaded human ferritin heavy chain
分子名称: CHLORIDE ION, Ferritin heavy chain, GLYCEROL, ...
著者Chen, X, Jiang, B, Yan, X, Fan, K.
登録日2020-07-16
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献A natural drug entry channel in the ferritin nanocage.
Nano Today, 35, 2020
7WCL
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BU of 7wcl by Molmil
Crystal structure of FGFR1 kinase domain with Pemigatinib
分子名称: 11-[2,6-bis(fluoranyl)-3,5-dimethoxy-phenyl]-13-ethyl-4-(morpholin-4-ylmethyl)-5,7,11,13-tetrazatricyclo[7.4.0.0^{2,6}]trideca-1(9),2(6),3,7-tetraen-12-one, Fibroblast growth factor receptor 1, SULFATE ION
著者Chen, X.J, Lin, Q.M, Jiang, L.Y, Qu, L.Z, Chen, Y.H.
登録日2021-12-20
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献Characterization of the cholangiocarcinoma drug pemigatinib against FGFR gatekeeper mutants.
Commun Chem, 5, 2022
6LBG
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BU of 6lbg by Molmil
Structure of OR51B2 bound FEM1C
分子名称: Protein fem-1 homolog C,Peptide from Olfactory receptor 51B2, SULFATE ION
著者Chen, X, Liao, S, Xu, C.
登録日2019-11-14
公開日2020-10-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Molecular basis for arginine C-terminal degron recognition by Cul2 FEM1 E3 ligase.
Nat.Chem.Biol., 17, 2021
8U5H
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BU of 8u5h by Molmil
Cryo-EM structure of human DNMT3A UDR bound to H2AK119ub1-modified nucleosome
分子名称: DNA (cytosine-5)-methyltransferase 3A, Histone H2A, Histone H2B 1.1, ...
著者Chen, X, Song, J.
登録日2023-09-12
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Cryo-EM structure of human DNMT3A N-terminal domain bound to H2AK119Ub nucleosome
To Be Published
5XFS
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BU of 5xfs by Molmil
Crystal structure of PE8-PPE15 in complex with EspG5 from M. tuberculosis
分子名称: ESX-5 secretion-associated protein EspG5, PE family protein PE8, PPE family protein PPE15
著者Chen, X, Au, S.W.N.
登録日2017-04-11
公開日2017-08-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of the PE-PPE protein interaction in Mycobacterium tuberculosis.
J. Biol. Chem., 292, 2017
5YQG
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BU of 5yqg by Molmil
The structure of 14-3-3 and pNumb peptide
分子名称: 14-3-3 protein eta, Peptide from Protein numb homolog
著者Chen, X, Liu, Z, Wen, W.
登録日2017-11-06
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural determinants controlling 14-3-3 recruitment to the endocytic adaptor Numb and dissociation of the Numb/alpha-adaptin complex.
J. Biol. Chem., 293, 2018
7DWS
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BU of 7dws by Molmil
The structure of T4 Lysozyme I3C/C54T/R125C/E128C complex with Zinc ions
分子名称: Endolysin, ZINC ION
著者Chen, X, Chen, S.
登録日2021-01-17
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Rationally designed protein cross-linked hydrogel for bone regeneration via synergistic release of magnesium and zinc ions.
Biomaterials, 274, 2021
2OZ4
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BU of 2oz4 by Molmil
Structural Plasticity in IgSF Domain 4 of ICAM-1 Mediates Cell Surface Dimerization
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, FAB FRAGMENT LIGHT CHAIN, ...
著者Chen, X, Kim, T.D, Carman, C.V, Mi, L, Song, G, Springer, T.A.
登録日2007-02-23
公開日2007-10-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural plasticity in Ig superfamily domain 4 of ICAM-1 mediates cell surface dimerization.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1EKA
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BU of 1eka by Molmil
NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2
分子名称: RNA (5'-R(*GP*AP*GP*UP*GP*CP*UP*C)-3')
著者Chen, X, McDowell, J.A, Kierzek, R, Krugh, T.R, Turner, D.H.
登録日2000-03-07
公開日2000-11-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
Biochemistry, 39, 2000
1EKD
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BU of 1ekd by Molmil
NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2
分子名称: RNA (5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3')
著者Chen, X, McDowell, J.A, Kierzek, R, Krugh, T.R, Turner, D.H.
登録日2000-03-07
公開日2000-11-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
Biochemistry, 39, 2000
2N3V
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BU of 2n3v by Molmil
Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the extended binding mode
分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
著者Chen, X, Walters, K.J.
登録日2015-06-10
公開日2016-02-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
2N3T
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Solution structure of the Rpn1 substrate receptor site toroid 1 (T1)
分子名称: 26S proteasome regulatory subunit RPN1
著者Chen, X, Walters, K.J.
登録日2015-06-10
公開日2016-02-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
2N3W
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Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode
分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
著者Chen, X, Walters, K.J.
登録日2015-06-10
公開日2016-02-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016

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