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PDB: 55 results

7LL8
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BU of 7ll8 by Molmil
D-Protein RFX-V1 Bound to the VEGFR1 Domain 2 Site on VEGF-A
Descriptor: Isoform L-VEGF189 of Vascular endothelial growth factor A, RFX-V1
Authors:Marinec, P.S, Landgraf, K.E, Uppalapati, M, Chen, G, Xie, D, Jiang, Q, Zhao, Y, Petriello, A, Deshayes, K, Kent, S.B.H, Ault-Riche, D, Sidhu, S.S.
Deposit date:2021-02-03
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A Non-immunogenic Bivalent d-Protein Potently Inhibits Retinal Vascularization and Tumor Growth.
Acs Chem.Biol., 16, 2021
7LL9
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BU of 7ll9 by Molmil
D-Protein RFX-V2 Bound to the VEGFR1 Domain 3 Site on VEGF-A
Descriptor: Isoform L-VEGF189 of Vascular endothelial growth factor A, RFX-V2
Authors:Marinec, P.S, Landgraf, K.E, Uppalapati, M, Chen, G, Xie, D, Jiang, Q, Zhao, Y, Petriello, A, Deshayes, K, Kent, S.B.H, Ault-Riche, D, Sidhu, S.S.
Deposit date:2021-02-03
Release date:2021-03-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Non-immunogenic Bivalent d-Protein Potently Inhibits Retinal Vascularization and Tumor Growth.
Acs Chem.Biol., 16, 2021
8WMK
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BU of 8wmk by Molmil
Structure of ConA/Man2
Descriptor: 4-[3-(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
8WMG
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BU of 8wmg by Molmil
Structure of ConA/Man3
Descriptor: 4-[3,5-bis(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
5BOD
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BU of 5bod by Molmil
Crystal structure of Streptococcus pneumonia ParE inhibitor
Descriptor: (2R)-N-[3-(3,5-dimethylphenyl)-1H-pyrazol-5-yl]-1,4-dioxane-2-carboxamide, DNA topoisomerase 4 subunit B
Authors:Tan, Y.W, Chen, G, Hung, A.W, Hill, J.
Deposit date:2015-05-27
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Application of Fragment-based Drug Discovery against DNA GyraseB
to be published
1RH1
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BU of 1rh1 by Molmil
crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
Descriptor: Colicin B
Authors:Hilsenbeck, J.L, Park, H, Chen, G, Youn, B, Postle, K, Kang, C.
Deposit date:2003-11-13
Release date:2004-03-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
Mol.Microbiol., 51, 2004
7CUK
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BU of 7cuk by Molmil
Structure of a GG mismatch-containing duplex formed by G4C2 repeats
Descriptor: DNA (11-mer)
Authors:Maity, A, Chen, G, Phan, A.T, Winnerdy, F.R.
Deposit date:2020-08-23
Release date:2021-03-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Duplexes Formed by G 4 C 2 Repeats Contain Alternate Slow- and Fast-Flipping G·G Base Pairs.
Biochemistry, 60, 2021
3V93
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BU of 3v93 by Molmil
unliganded structure of TcrPDEC1 catalytic domain
Descriptor: Cyclic nucleotide specific phosphodiesterase, MAGNESIUM ION, ZINC ION
Authors:Wang, H, Kunz, S, Chen, G, Seebeck, T, Wan, Y, Robinson, H, Martinelli, S, Ke, H.
Deposit date:2011-12-23
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biological and structural characterization of Trypanosoma cruzi phosphodiesterase C and Implications for design of parasite selective inhibitors.
J.Biol.Chem., 287, 2012
3V94
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BU of 3v94 by Molmil
TcrPDEC1 catalytic domain in complex with inhibitor wyq16
Descriptor: Cyclic nucleotide specific phosphodiesterase, MAGNESIUM ION, ZINC ION, ...
Authors:Wang, H, Kunz, S, Chen, G, Seebeck, T, Wan, Y, Robinson, H, Martinelli, S, Ke, H.
Deposit date:2011-12-23
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:TcrPDEC1 catalytic domain in complex with inhibitor wyq16
To be Published
6LK0
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BU of 6lk0 by Molmil
Crystal structure of human wild type TRIP13
Descriptor: Pachytene checkpoint protein 2 homolog
Authors:Wang, Y, Huang, J, Li, B, Xue, H, Tricot, G, Hu, L, Xu, Z, Sun, X, Chang, S, Gao, L, Tao, Y, Xu, H, Xie, Y, Xiao, W, Yu, D, Kong, Y, Chen, G, Sun, X, Lian, F, Zhang, N, Wu, X, Mao, Z, Zhan, F, Zhu, W, Shi, J.
Deposit date:2019-12-17
Release date:2020-01-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Small-Molecule Inhibitor Targeting TRIP13 Suppresses Multiple Myeloma Progression.
Cancer Res., 80, 2020
6LQZ
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BU of 6lqz by Molmil
Solution structure of Taf14ET-Sth1EBMC
Descriptor: Nuclear protein STH1/NPS1, Transcription initiation factor TFIID subunit 14
Authors:Wu, B, Chen, G, Chen, Y.
Deposit date:2020-01-15
Release date:2020-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Taf14 recognizes a common motif in transcriptional machineries and facilitates their clustering by phase separation.
Nat Commun, 11, 2020
6L5Z
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BU of 6l5z by Molmil
Crystal strucutre of AF9 YEATS domain in complex with a cyclopeptide inhibitor
Descriptor: Protein AF-9, SC0-ALO-ALA-SC3-SC4-NH2
Authors:Li, Y, Chen, G, Li, H.
Deposit date:2019-10-25
Release date:2020-10-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Selective Targeting of AF9 YEATS Domain by Cyclopeptide Inhibitors with Preorganized Conformation.
J.Am.Chem.Soc., 142, 2020
7VFX
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BU of 7vfx by Molmil
The structure of Formyl Peptide Receptor 1 in complex with Gi and peptide agonist fMIFL
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, X.K, Chen, G, Liao, Q.W, Du, Y, Hu, H.L, Ye, D.Q.
Deposit date:2021-09-14
Release date:2022-09-21
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for recognition of N-formyl peptides as pathogen-associated molecular patterns.
Nat Commun, 13, 2022
7EUO
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BU of 7euo by Molmil
The structure of formyl peptide receptor 1 in complex with Gi and peptide agonist fMLF
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, X.K, Chen, G, Liao, Q.W, Du, Y, Hu, H.L, Ye, D.Q.
Deposit date:2021-05-18
Release date:2022-05-25
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for recognition of N-formyl peptides as pathogen-associated molecular patterns.
Nat Commun, 13, 2022
2MFZ
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BU of 2mfz by Molmil
NMR structure of C-terminal domain from A. ventricosus minor ampullate spidroin (MiSp)
Descriptor: Minor ampullate spidroin
Authors:Otikovs, M, Jaudzems, K, Andersson, M, Chen, G, Landreh, M, Nordling, K, Kronqvist, N, Westermark, P, Jornvall, H, Knight, S, Ridderstrale, Y, Holm, L, Meng, Q, Chesler, M, Johansson, J, Rising, A.
Deposit date:2013-10-24
Release date:2014-08-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Carbonic Anhydrase Generates CO2 and H+ That Drive Spider Silk Formation Via Opposite Effects on the Terminal Domains
Plos Biol., 12, 2014
2MX9
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BU of 2mx9 by Molmil
NMR structure of N-terminal domain from A. ventricosus minor ampullate spidroin (MiSp) at pH 5.5
Descriptor: Minor ampullate spidroin
Authors:Otikovs, M, Jaudzems, K, Chen, G, Nordling, K, Rising, A, Johansson, J.
Deposit date:2014-12-17
Release date:2015-08-19
Method:SOLUTION NMR
Cite:Diversified Structural Basis of a Conserved Molecular Mechanism for pH-Dependent Dimerization in Spider Silk N-Terminal Domains.
Chembiochem, 16, 2015
2MX8
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BU of 2mx8 by Molmil
NMR structure of N-terminal domain from A. ventricosus minor ampullate spidroin (MiSp) at pH 7.2
Descriptor: Minor ampullate spidroin
Authors:Otikovs, M, Jaudzems, K, Chen, G, Nordling, K, Rising, A, Johansson, J.
Deposit date:2014-12-17
Release date:2015-08-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Diversified Structural Basis of a Conserved Molecular Mechanism for pH-Dependent Dimerization in Spider Silk N-Terminal Domains.
Chembiochem, 16, 2015
8IA8
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BU of 8ia8 by Molmil
Cryo-EM structure of C3aR-Gi-scFv16 bound with E7 peptide
Descriptor: ALA-SER-LYS-LEU-GLY-LEU-ALA-ARG, C3a anaphylatoxin chemotactic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Liao, Q, Chen, G, Du, Y, Ye, R.D.
Deposit date:2023-02-08
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Cryo-EM structure of C3aR-Gi-scFv16 bound with E7 peptide
To Be Published
4P9Y
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BU of 4p9y by Molmil
Structure of ConA/Rh4man
Descriptor: 2-{2-[2-(2-{4-[(alpha-D-mannopyranosyloxy)methyl]-1H-1,2,3-triazol-1-yl}ethoxy)ethoxy]ethoxy}ethyl 2-[3,6-bis(diethylamino)-9H-xanthen-9-yl]benzoate, CALCIUM ION, Concanavalin-A, ...
Authors:Sakai, F, Weiss, M.S, Chen, G.
Deposit date:2014-04-06
Release date:2014-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of ConA/Rh4Man
To Be Published
4P9X
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BU of 4p9x by Molmil
Structure of ConA/Rh3Glu complex
Descriptor: 2-[2-(2-{4-[(alpha-D-glucopyranosyloxy)methyl]-1H-1,2,3-triazol-1-yl}ethoxy)ethoxy]ethyl 2-[3,6-bis(diethylamino)-9H-xanthen-9-yl]benzoate, CALCIUM ION, Concanavalin-A, ...
Authors:Sakai, F, Weiss, M.S, Chen, G.
Deposit date:2014-04-06
Release date:2014-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure of ConA/Rh3Glu complex
To Be Published
6KVB
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BU of 6kvb by Molmil
Structure of an intra-locked G-quadruplex
Descriptor: DNA (28-mer)
Authors:Maity, A, Winnerdy, F.R, Chang, W.D, Chen, G, Phan, A.T.
Deposit date:2019-09-03
Release date:2020-03-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Intra-locked G-quadruplex structures formed by irregular DNA G-rich motifs.
Nucleic Acids Res., 48, 2020
6OTC
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BU of 6otc by Molmil
Synthetic Fab bound to Marburg virus VP35 interferon inhibitory domain
Descriptor: CHLORIDE ION, GLYCEROL, Polymerase cofactor VP35, ...
Authors:Amatya, P, Chen, G, Borek, D, Sidhu, S.S, Leung, D.W.
Deposit date:2019-05-02
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibition of Marburg Virus RNA Synthesis by a Synthetic Anti-VP35 Antibody.
Acs Infect Dis., 5, 2019
7VF1
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BU of 7vf1 by Molmil
Solution structure of a duplex-quadruplex hybrid formed by d[G4C2] repeats
Descriptor: DNA (14-mer)
Authors:Maity, A, Lim, K.W, Shneider, N.A, Chen, G, Phan, A.T.
Deposit date:2021-09-10
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A duplex-quadruplex hybrid formed by d[G4C2] repeats
To be published
7WZ4
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BU of 7wz4 by Molmil
Structure of an orphan GPCR-G protein signaling complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Xu, J, Chen, G, Liu, Z, Du, Y.
Deposit date:2022-02-17
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Activation and allosteric regulation of the orphan GPR88-Gi1 signaling complex.
Nat Commun, 13, 2022
7X2E
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BU of 7x2e by Molmil
Structure of USH1C PDZ2 and coiled-coil in complex with CDHR2 C-terminal tail
Descriptor: Cadherin-related family member 2, GLYCEROL, Harmonin
Authors:Yan, W, Chen, G, Li, J.
Deposit date:2022-02-25
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the Harmonin PDZ2 and coiled-coil domains in a complex with CDHR2 tail and its implications.
Faseb J., 36, 2022

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