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PDB: 1209 results

3LAG
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BU of 3lag by Molmil
The crystal structure of a functionally unknown protein RPA4178 from Rhodopseudomonas palustris CGA009
Descriptor: CALCIUM ION, FORMIC ACID, NICKEL (II) ION, ...
Authors:Tan, K, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-06
Release date:2010-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:The crystal structure of a functionally unknown protein RPA4178 from Rhodopseudomonas palustris CGA009
To be Published
5IBZ
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BU of 5ibz by Molmil
Crystal structure of a novel cyclase (pfam04199).
Descriptor: ACETYLPHOSPHATE, TRIETHYLENE GLYCOL, Uncharacterized protein
Authors:Nocek, B, Skarina, T, Brown, G, Joachimiak, A, Savchenko, A, Yakunin, A.
Deposit date:2016-02-22
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.611 Å)
Cite:Crystal structure of a novel cyclase (pfam04199).
To Be Published
7TI9
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BU of 7ti9 by Molmil
Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2, form 2
Descriptor: CHLORIDE ION, GLYCEROL, Papain-like protease nsp3
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-01-13
Release date:2022-01-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2, form 2
To Be Published
6V98
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BU of 6v98 by Molmil
Crystal structure of Type VI secretion system effector, TseH (VCA0285)
Descriptor: CALCIUM ION, Cysteine hydrolase
Authors:Watanabe, N, Hersch, S.J, Dong, T.G, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-13
Release date:2020-01-15
Last modified:2020-05-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Envelope stress responses defend against type six secretion system attacks independently of immunity proteins.
Nat Microbiol, 5, 2020
3F5R
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BU of 3f5r by Molmil
The crystal structure of a subunit of the heterodimeric FACT complex (Spt16p-Pob3p).
Descriptor: CHLORIDE ION, FACT complex subunit POB3, FORMIC ACID, ...
Authors:Tan, K, Xu, X, Cui, H, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-11-04
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of a subunit of the heterodimeric FACT complex (Spt16p-Pob3p).
To be Published
8E5X
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BU of 8e5x by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with a dimethyl sulfinyl benzene inhibitor
Descriptor: (2~{S})-2-[[(2~{S})-4-methyl-2-[[2-methyl-2-[oxidanyl(phenyl)-$l^{3}-sulfanyl]propoxy]carbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, N~2~-(ethoxycarbonyl)-N-{(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-1-sulfanylpropan-2-yl}-L-leucinamide, ...
Authors:Lovell, S, Machen, A.J, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
Deposit date:2022-08-22
Release date:2022-09-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-guided design of direct-acting antivirals that exploit the gem-dimethyl effect and potently inhibit 3CL proteases of severe acute respiratory syndrome Coronavirus-2 (SARS-CoV-2) and middle east respiratory syndrome coronavirus (MERS-CoV).
Eur.J.Med.Chem., 254, 2023
3M16
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BU of 3m16 by Molmil
Structure of a Transaldolase from Oleispira antarctica
Descriptor: Transaldolase
Authors:Singer, A.U, Kagan, O, Zhang, R, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-03-04
Release date:2010-06-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
6VOP
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BU of 6vop by Molmil
Crystal structure of YgbL, a putative aldolase/epimerase/decarboxylase from Escherichia coli
Descriptor: Aldolase
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-01-31
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of YgbL, a putative aldolase/epimerase/decarboxylase from Escherichia coli
To Be Published
6VOQ
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BU of 6voq by Molmil
Crystal structure of YgbL, a putative aldolase/epimerase/decarboxylase from Klebsiella pneumoniae
Descriptor: Aldolase, CHLORIDE ION, ZINC ION
Authors:Stogios, P.J, Evdokimova, E, McChesney, C, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-01-31
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of YgbL, a putative aldolase/epimerase/decarboxylase from Klebsiella pneumoniae
To Be Published
3CZP
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BU of 3czp by Molmil
Crystal structure of putative polyphosphate kinase 2 from Pseudomonas aeruginosa PA01
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Nocek, B, Evdokimova, E, Osipiuk, J, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-29
Release date:2008-07-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Polyphosphate-dependent synthesis of ATP and ADP by the family-2 polyphosphate kinases in bacteria.
Proc.Natl.Acad.Sci.USA, 105, 2008
3D1R
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BU of 3d1r by Molmil
Structure of E. coli GlpX with its substrate fructose 1,6-bisphosphate
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Singer, A, Skarina, T, Dong, A, Brown, G, Joachimiak, A, Edwards, A.M, Yakunin, A.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-05-06
Release date:2008-12-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biochemical Characterization of the Type II Fructose-1,6-bisphosphatase GlpX from Escherichia coli.
J.Biol.Chem., 284, 2009
3CZQ
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BU of 3czq by Molmil
Crystal structure of putative polyphosphate kinase 2 from Sinorhizobium meliloti
Descriptor: FORMIC ACID, GLYCEROL, Putative polyphosphate kinase 2
Authors:Osipiuk, J, Evdokimova, E, Nocek, B, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-29
Release date:2008-07-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Polyphosphate-dependent synthesis of ATP and ADP by the family-2 polyphosphate kinases in bacteria.
Proc.Natl.Acad.Sci.USA, 105, 2008
7RCA
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BU of 7rca by Molmil
Crystal structure of Aro2p chorismate synthase from Candida lusitaniae
Descriptor: CHLORIDE ION, Chorismate synthase, SULFATE ION
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-07
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of Aro2p chorismate synthase from Candida lusitaniae
To Be Published
5JEQ
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BU of 5jeq by Molmil
Fragment of nitrate/nitrite sensor histidine kinase NarQ (R50K) in symmetric apo state
Descriptor: Nitrate/nitrite sensor protein NarQ, PHOSPHATE ION
Authors:Gushchin, I, Melnikov, I, Polovinkin, V, Ishchenko, A, Popov, A, Gordeliy, V.
Deposit date:2016-04-18
Release date:2017-05-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of transmembrane signaling by sensor histidine kinases.
Science, 356, 2017
7REU
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BU of 7reu by Molmil
Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
Descriptor: 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-13
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
To Be Published
7RJ1
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BU of 7rj1 by Molmil
Crystal structure of Aro7p chorismate mutase from Candida albicans, complex with L-Trp
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Chorismate mutase, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-20
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Aro7p chorismate mutase from Candida albicans, complex with L-Trp
To Be Published
7RLL
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BU of 7rll by Molmil
Crystal structure of ARF3 from Candida albicans in complex with guanosine-3'-monophosphate-5'-diphosphate
Descriptor: Arf3p, GUANOSINE-3'-MONOPHOSPHATE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Stogios, P.J, Michalska, K, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-25
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ARF3 from Candida albicans in complex with guanosine-3'-monophosphate-5'-diphosphate
To Be Published
2O9X
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BU of 2o9x by Molmil
Crystal Structure Of A Putative Redox Enzyme Maturation Protein From Archaeoglobus Fulgidus
Descriptor: Reductase, assembly protein
Authors:Kirillova, O, Chruszcz, M, Skarina, T, Gorodichtchenskaia, E, Cymborowski, M, Shumilin, I, Savchenko, A, Edwards, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-12-14
Release date:2007-01-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:An extremely SAD case: structure of a putative redox-enzyme maturation protein from Archaeoglobus fulgidus at 3.4 A resolution.
Acta Crystallogr.,Sect.D, 63, 2007
6PTA
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BU of 6pta by Molmil
Crystal structure of the ARF family small GTPase ARF1 from Candida albicans in complex with GDP
Descriptor: ADP-ribosylation factor, GUANOSINE-5'-DIPHOSPHATE
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-07-15
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the ARF family small GTPase ARF1 from Candida albicans in complex with GDP
To Be Published
3FM5
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BU of 3fm5 by Molmil
X-ray crystal structure of transcriptional regulator (MarR family) from Rhodococcus sp. RHA1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Nocek, B, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-12-19
Release date:2009-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of transcriptional regulator (MarR family) from Rhodococcus sp. RHA1
To be Published
3OJC
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BU of 3ojc by Molmil
Crystal structure of a putative Asp/Glu Racemase from Yersinia pestis
Descriptor: CALCIUM ION, HEXANE-1,6-DIOL, Putative aspartate/glutamate racemase
Authors:Anderson, S.M, Wawrzak, Z, Kudritska, M, Kwon, K, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-08-21
Release date:2010-09-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a putative Asp/Glu Racemase from Yersinia pestis
To be Published
6XNJ
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BU of 6xnj by Molmil
Crystal structure of the PDZ domain of human GOPC in complex with a peptide of E. coli O157:H7 str. Sakai effector NleG8
Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, NleG8 peptide, SULFATE ION
Authors:Stogios, P.J, Skarina, T, Popov, G, Chang, C, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-03
Release date:2020-08-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the PDZ domain of human GOPC in complex with a peptide of E. coli O157:H7 str. Sakai effector NleG8
To Be Published
8CKP
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BU of 8ckp by Molmil
X-ray structure of the crystallization-prone form of subfamily III haloalkane dehalogenase DhmeA from Haloferax mediterranei
Descriptor: Alpha/beta fold hydrolase, CHLORIDE ION
Authors:Marek, M, Chmelova, K, Schenkmayerova, A, Croll, T, Read, R.J, Diederichs, K.
Deposit date:2023-02-16
Release date:2023-08-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Multimeric structure of a subfamily III haloalkane dehalogenase-like enzyme solved by combination of cryo-EM and x-ray crystallography.
Protein Sci., 32, 2023
4YFJ
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BU of 4yfj by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(3)-Ib
Descriptor: Aminoglycoside 3'-N-acetyltransferase, SULFATE ION
Authors:Stogios, P.J, Xu, Z, Evdokimova, E, Yim, V, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-02-25
Release date:2015-03-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of aminoglycoside acetyltransferase AAC(3)-Ib
To Be Published
3CNG
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BU of 3cng by Molmil
Crystal structure of NUDIX hydrolase from Nitrosomonas europaea
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Osipiuk, J, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-25
Release date:2008-04-08
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of NUDIX hydrolase from Nitrosomonas europaea.
To be Published

224004

PDB entries from 2024-08-21

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